RNA–Protein interactions for RNA: ENST00000231656.12

CDX1-201, Transcript of caudal type homeobox 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDX1, Length 1,758 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDX1-201ENST00000231656 KATNAL2Q8IYT4 538 aa23.83■■□□□ 1.4
CDX1-201ENST00000231656 FAM193BQ96PV7 902 aaPredicted RBP23.83■■□□□ 1.4
CDX1-201ENST00000231656 NT5C1AQ9BXI3 368 aa23.83■■□□□ 1.4
CDX1-201ENST00000231656 IL23AQ9NPF7 189 aa23.83■■□□□ 1.4
CDX1-201ENST00000231656 FAM114A2Q9NRY5 505 aa23.83■■□□□ 1.4
CDX1-201ENST00000231656 DNAJB4Q9UDY4 337 aa23.83■■□□□ 1.4
CDX1-201ENST00000231656 STRIP2Q9ULQ0 834 aa23.83■■□□□ 1.4
CDX1-201ENST00000231656 WDR3Q9UNX4 943 aaKnown RBP eCLIP23.83■■□□□ 1.4
CDX1-201ENST00000231656 NME7Q9Y5B8 376 aa23.83■■□□□ 1.4
CDX1-201ENST00000231656 MICAL2O94851 1124 aa23.82■■□□□ 1.4
CDX1-201ENST00000231656 GGCXP38435 758 aa23.82■■□□□ 1.4
CDX1-201ENST00000231656 OGDHQ02218 1023 aa23.82■■□□□ 1.4
CDX1-201ENST00000231656 TERF2Q15554 542 aa23.82■■□□□ 1.4
CDX1-201ENST00000231656 PAN2Q504Q3 1202 aaKnown RBP23.82■■□□□ 1.4
CDX1-201ENST00000231656 ALS2CLQ60I27 953 aa23.82■■□□□ 1.4
CDX1-201ENST00000231656 C7orf61Q8IZ16 206 aa23.82■■□□□ 1.4
CDX1-201ENST00000231656 MCEEQ96PE7 176 aa23.82■■□□□ 1.4
CDX1-201ENST00000231656 ERP44Q9BS26 406 aa23.82■■□□□ 1.4
CDX1-201ENST00000231656 USTQ9Y2C2 406 aa23.82■■□□□ 1.4
CDX1-201ENST00000231656 GSCP56915 257 aaPredicted RBP23.81■■□□□ 1.4
CDX1-201ENST00000231656 CNGA2Q16280 664 aa23.81■■□□□ 1.4
CDX1-201ENST00000231656 TIGD5Q53EQ6 642 aa23.81■■□□□ 1.4
CDX1-201ENST00000231656 ADGRF2Q8IZF7 708 aa23.81■■□□□ 1.4
CDX1-201ENST00000231656 OR6B3Q8NGW1 331 aa23.81■■□□□ 1.4
CDX1-201ENST00000231656 RSPH1Q8WYR4 309 aa23.81■■□□□ 1.4
CDX1-201ENST00000231656 HERPUD2Q9BSE4 406 aa23.81■■□□□ 1.4
CDX1-201ENST00000231656 TBKBP1A7MCY6 615 aa23.8■■□□□ 1.4
CDX1-201ENST00000231656 F8W810 466 aa23.8■■□□□ 1.4
CDX1-201ENST00000231656 EFCAB14O75071 495 aa23.8■■□□□ 1.4
CDX1-201ENST00000231656 ITGB1P05556 798 aa23.8■■□□□ 1.4
CDX1-201ENST00000231656 COILP38432 576 aaPredicted RBP23.8■■□□□ 1.4
CDX1-201ENST00000231656 HSPA9P38646 679 aaKnown RBP23.8■■□□□ 1.4
CDX1-201ENST00000231656 WDR5P61964 334 aaKnown RBP23.8■■□□□ 1.4
CDX1-201ENST00000231656 CCDC137Q6PK04 289 aaKnown RBP23.8■■□□□ 1.4
CDX1-201ENST00000231656 DSTYKQ6XUX3 929 aa23.8■■□□□ 1.4
CDX1-201ENST00000231656 UNC93AQ86WB7 457 aa23.8■■□□□ 1.4
CDX1-201ENST00000231656 HASPINQ8TF76 798 aa23.8■■□□□ 1.4
CDX1-201ENST00000231656 BADQ92934 168 aa23.8■■□□□ 1.4
CDX1-201ENST00000231656 TOP1MTQ969P6 601 aa23.8■■□□□ 1.4
CDX1-201ENST00000231656 RUNDC3BQ96NL0 473 aa23.8■■□□□ 1.4
CDX1-201ENST00000231656 MRPL9Q9BYD2 267 aaKnown RBP23.8■■□□□ 1.4
CDX1-201ENST00000231656 DPH5Q9H2P9 285 aa23.8■■□□□ 1.4
CDX1-201ENST00000231656 LRRC19Q9H756 370 aa23.8■■□□□ 1.4
CDX1-201ENST00000231656 NRDE2Q9H7Z3 1164 aa23.8■■□□□ 1.4
CDX1-201ENST00000231656 TJP2Q9UDY2 1190 aa23.8■■□□□ 1.4
CDX1-201ENST00000231656 DGKIO75912 1065 aa23.8■■□□□ 1.4
CDX1-201ENST00000231656 FAM163BP0C2L3 166 aa23.8■■□□□ 1.4
CDX1-201ENST00000231656 WARSP23381 471 aaKnown RBP23.8■■□□□ 1.4
CDX1-201ENST00000231656 PAX3P23760 479 aa23.8■■□□□ 1.4
CDX1-201ENST00000231656 GNL1P36915 607 aaPredicted RBP23.8■■□□□ 1.4
CDX1-201ENST00000231656 OR1G1P47890 313 aa23.8■■□□□ 1.4
CDX1-201ENST00000231656 FNTAP49354 379 aa23.8■■□□□ 1.4
CDX1-201ENST00000231656 DEFB103AP81534 67 aa23.8■■□□□ 1.4
CDX1-201ENST00000231656 WSCD1Q658N2 575 aa23.8■■□□□ 1.4
CDX1-201ENST00000231656 DCUN1D2Q6PH85 259 aa23.8■■□□□ 1.4
CDX1-201ENST00000231656 C16orf59Q7L2K0 433 aa23.8■■□□□ 1.4
CDX1-201ENST00000231656 NIPA2Q8N8Q9 360 aa23.8■■□□□ 1.4
CDX1-201ENST00000231656 HEXIM2Q96MH2 286 aaKnown RBP23.8■■□□□ 1.4
CDX1-201ENST00000231656 CPXM1Q96SM3 734 aa23.8■■□□□ 1.4
CDX1-201ENST00000231656 KIAA1257Q9ULG3 409 aa23.8■■□□□ 1.4
CDX1-201ENST00000231656 FAN1Q9Y2M0 1017 aa23.8■■□□□ 1.4
CDX1-201ENST00000231656 LAMA2P24043 3122 aaKnown RBP23.79■■□□□ 1.4
CDX1-201ENST00000231656 A8MXQ7 604 aa23.79■■□□□ 1.4
CDX1-201ENST00000231656 I3L4J1 428 aa23.79■■□□□ 1.4
CDX1-201ENST00000231656 AMHP03971 560 aa23.79■■□□□ 1.4
CDX1-201ENST00000231656 LMO2P25791 158 aa23.79■■□□□ 1.4
CDX1-201ENST00000231656 BRCC3P46736 316 aa23.79■■□□□ 1.4
CDX1-201ENST00000231656 DRG2P55039 364 aaKnown RBP23.79■■□□□ 1.4
CDX1-201ENST00000231656 PPIGQ13427 754 aaKnown RBP eCLIP23.79■■□□□ 1.4
CDX1-201ENST00000231656 SGO2Q562F6 1265 aa23.79■■□□□ 1.4
CDX1-201ENST00000231656 EXD1Q8NHP7 514 aa23.79■■□□□ 1.4
CDX1-201ENST00000231656 MAIP1Q8WWC4 291 aa23.79■■□□□ 1.4
CDX1-201ENST00000231656 SNX25Q9H3E2 840 aa23.79■■□□□ 1.4
CDX1-201ENST00000231656 HCSTQ9UBK5 93 aa23.79■■□□□ 1.4
CDX1-201ENST00000231656 RASAL2Q9UJF2 1139 aa23.79■■□□□ 1.4
CDX1-201ENST00000231656 SIGLEC16A6NMB1 481 aa23.78■■□□□ 1.4
CDX1-201ENST00000231656 GABRDO14764 452 aa23.78■■□□□ 1.4
CDX1-201ENST00000231656 HCRTO43612 131 aa23.78■■□□□ 1.4
CDX1-201ENST00000231656 BAIAP3O94812 1187 aa23.78■■□□□ 1.4
CDX1-201ENST00000231656 ERBB2P04626 1255 aa23.78■■□□□ 1.4
CDX1-201ENST00000231656 GPD2P43304 727 aa23.78■■□□□ 1.4
CDX1-201ENST00000231656 FAM193AP78312 1265 aa23.78■■□□□ 1.4
CDX1-201ENST00000231656 FPGSQ05932 587 aa23.78■■□□□ 1.4
CDX1-201ENST00000231656 PIGHQ14442 188 aaPredicted RBP23.78■■□□□ 1.4
CDX1-201ENST00000231656 LLGL1Q15334 1064 aa23.78■■□□□ 1.4
CDX1-201ENST00000231656 OTOP2Q7RTS6 562 aa23.78■■□□□ 1.4
CDX1-201ENST00000231656 OSTM1Q86WC4 334 aa23.78■■□□□ 1.4
CDX1-201ENST00000231656 XYLT1Q86Y38 959 aa23.78■■□□□ 1.4
CDX1-201ENST00000231656 IQCKQ8N0W5 287 aa23.78■■□□□ 1.4
CDX1-201ENST00000231656 TMEM86AQ8N2M4 240 aa23.78■■□□□ 1.4
CDX1-201ENST00000231656 RIN2Q8WYP3 895 aaPredicted RBP23.78■■□□□ 1.4
CDX1-201ENST00000231656 PIK3R5Q8WYR1 880 aa23.78■■□□□ 1.4
CDX1-201ENST00000231656 SH3GL2Q99962 352 aa23.78■■□□□ 1.4
CDX1-201ENST00000231656 WDR35Q9P2L0 1181 aa23.78■■□□□ 1.4
CDX1-201ENST00000231656 TSC2P49815 1807 aa23.78■■□□□ 1.4
CDX1-201ENST00000231656 TMEM189-UBE2V1I3L0A0 370 aa23.78■■□□□ 1.4
CDX1-201ENST00000231656 M0QYV0 167 aa23.78■■□□□ 1.4
CDX1-201ENST00000231656 M0QZQ0 153 aa23.78■■□□□ 1.4
CDX1-201ENST00000231656 HSF2BPO75031 334 aa23.78■■□□□ 1.4
CDX1-201ENST00000231656 TCF4P15884 667 aa23.78■■□□□ 1.4
Retrieved 100 of 20,778 RNA–protein pairs in 83.6 ms