RNA–Protein interactions for RNA: ENSMUST00000003645.8

Ercc1-201, Transcript of DNA excision repair protein ERCC-1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ercc1, Length 1,375 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ercc1-201ENSMUST00000003645 Mcrs1Q99L90 462 aa15.49■□□□□ 0.07
Ercc1-201ENSMUST00000003645 Atad1Q9D5T0 361 aa15.49■□□□□ 0.07
Ercc1-201ENSMUST00000003645 Gabbr1Q9WV18 960 aa15.49■□□□□ 0.07
Ercc1-201ENSMUST00000003645 Zfp236S4R299 1847 aa15.49■□□□□ 0.07
Ercc1-201ENSMUST00000003645 Gm8994E9PV04 411 aaKnown RBP15.49■□□□□ 0.07
Ercc1-201ENSMUST00000003645 Acot1O55137 419 aa15.49■□□□□ 0.07
Ercc1-201ENSMUST00000003645 Birc5O70201 140 aa15.49■□□□□ 0.07
Ercc1-201ENSMUST00000003645 Camk4P08414 469 aa15.49■□□□□ 0.07
Ercc1-201ENSMUST00000003645 EmbP21995 330 aa15.49■□□□□ 0.07
Ercc1-201ENSMUST00000003645 Nkx2-5P42582 318 aa15.49■□□□□ 0.07
Ercc1-201ENSMUST00000003645 Abi2P62484 446 aa15.49■□□□□ 0.07
Ercc1-201ENSMUST00000003645 Stt3bQ3TDQ1 823 aa15.49■□□□□ 0.07
Ercc1-201ENSMUST00000003645 Tars2Q3UQ84 723 aaKnown RBP15.49■□□□□ 0.07
Ercc1-201ENSMUST00000003645 Ice2Q3UZ18 988 aaKnown RBP15.49■□□□□ 0.07
Ercc1-201ENSMUST00000003645 PighQ5M9N4 188 aa15.49■□□□□ 0.07
Ercc1-201ENSMUST00000003645 Ksr1Q61097 873 aa15.49■□□□□ 0.07
Ercc1-201ENSMUST00000003645 Tfap2bQ61313 459 aa15.49■□□□□ 0.07
Ercc1-201ENSMUST00000003645 DazlQ64368 298 aaKnown RBP15.49■□□□□ 0.07
Ercc1-201ENSMUST00000003645 Fnip1Q68FD7 1165 aa15.49■□□□□ 0.07
Ercc1-201ENSMUST00000003645 Znf512Q69Z99 562 aa15.49■□□□□ 0.07
Ercc1-201ENSMUST00000003645 Nlrp14Q6B966 993 aa15.49■□□□□ 0.07
Ercc1-201ENSMUST00000003645 Rad9bQ6WBX7 403 aa15.49■□□□□ 0.07
Ercc1-201ENSMUST00000003645 Slc38a9Q8BGD6 560 aa15.49■□□□□ 0.07
Ercc1-201ENSMUST00000003645 Nod1Q8BHB0 953 aa15.49■□□□□ 0.07
Ercc1-201ENSMUST00000003645 Igsf8Q8R366 611 aa15.49■□□□□ 0.07
Ercc1-201ENSMUST00000003645 Rbm12Q8R4X3 992 aaKnown RBP15.49■□□□□ 0.07
Ercc1-201ENSMUST00000003645 Olfr356Q8VFP5 315 aa15.49■□□□□ 0.07
Ercc1-201ENSMUST00000003645 Pth2rQ91V95 546 aa15.49■□□□□ 0.07
Ercc1-201ENSMUST00000003645 Dpp3Q99KK7 738 aa15.49■□□□□ 0.07
Ercc1-201ENSMUST00000003645 Q9CQC3 228 aa15.49■□□□□ 0.07
Ercc1-201ENSMUST00000003645 Spata17Q9D552 379 aa15.49■□□□□ 0.07
Ercc1-201ENSMUST00000003645 Il17rbQ9JIP3 499 aa15.49■□□□□ 0.07
Ercc1-201ENSMUST00000003645 Clec1bQ9JL99 229 aa15.49■□□□□ 0.07
Ercc1-201ENSMUST00000003645 Grb14Q9JLM9 538 aa15.49■□□□□ 0.07
Ercc1-201ENSMUST00000003645 Atg2aQ6P4T0 1914 aa15.48■□□□□ 0.07
Ercc1-201ENSMUST00000003645 Olfr1305A2AVW3 312 aa15.48■□□□□ 0.07
Ercc1-201ENSMUST00000003645 Fam71aB7XG49 585 aa15.48■□□□□ 0.07
Ercc1-201ENSMUST00000003645 Rfx8D3YU81 596 aa15.48■□□□□ 0.07
Ercc1-201ENSMUST00000003645 Gm2030D3Z7C4 212 aa15.48■□□□□ 0.07
Ercc1-201ENSMUST00000003645 DgkdE9PUQ8 1220 aa15.48■□□□□ 0.07
Ercc1-201ENSMUST00000003645 Cldn5O54942 218 aa15.48■□□□□ 0.07
Ercc1-201ENSMUST00000003645 Smpd2O70572 419 aa15.48■□□□□ 0.07
Ercc1-201ENSMUST00000003645 Ctnnal1O88327 731 aa15.48■□□□□ 0.07
Ercc1-201ENSMUST00000003645 Becn1O88597 448 aa15.48■□□□□ 0.07
Ercc1-201ENSMUST00000003645 Kcnj6P48542 425 aa15.48■□□□□ 0.07
Ercc1-201ENSMUST00000003645 MlxipQ2VPU4 917 aa15.48■□□□□ 0.07
Ercc1-201ENSMUST00000003645 Serac1Q3U213 654 aa15.48■□□□□ 0.07
Ercc1-201ENSMUST00000003645 B230104I21RikQ3USW4 141 aa15.48■□□□□ 0.07
Ercc1-201ENSMUST00000003645 Dzip1lQ499E4 774 aa15.48■□□□□ 0.07
Ercc1-201ENSMUST00000003645 OgdhQ60597 1023 aaKnown RBP15.48■□□□□ 0.07
Ercc1-201ENSMUST00000003645 Arhgap26Q6ZQ82 814 aa15.48■□□□□ 0.07
Ercc1-201ENSMUST00000003645 Zdhhc17Q80TN5 632 aa15.48■□□□□ 0.07
Ercc1-201ENSMUST00000003645 Llgl1Q80Y17 1036 aa15.48■□□□□ 0.07
Ercc1-201ENSMUST00000003645 Thnsl1Q8BH55 747 aa15.48■□□□□ 0.07
Ercc1-201ENSMUST00000003645 BoraQ8BS90 525 aa15.48■□□□□ 0.07
Ercc1-201ENSMUST00000003645 Etf1Q8BWY3 437 aaKnown RBP15.48■□□□□ 0.07
Ercc1-201ENSMUST00000003645 Tp53inp2Q8CFU8 221 aa15.48■□□□□ 0.07
Ercc1-201ENSMUST00000003645 UvragQ8K245 698 aa15.48■□□□□ 0.07
Ercc1-201ENSMUST00000003645 Chn1Q91V57 459 aa15.48■□□□□ 0.07
Ercc1-201ENSMUST00000003645 Mrps2Q924T2 291 aaKnown RBP15.48■□□□□ 0.07
Ercc1-201ENSMUST00000003645 Mrpl9Q99N94 265 aaKnown RBP15.48■□□□□ 0.07
Ercc1-201ENSMUST00000003645 Chordc1Q9D1P4 331 aaKnown RBP15.48■□□□□ 0.07
Ercc1-201ENSMUST00000003645 Q9D454 513 aa15.48■□□□□ 0.07
Ercc1-201ENSMUST00000003645 Rassf7Q9DD19 359 aa15.48■□□□□ 0.07
Ercc1-201ENSMUST00000003645 IvdQ9JHI5 424 aa15.48■□□□□ 0.07
Ercc1-201ENSMUST00000003645 Cpxm1Q9Z100 722 aa15.48■□□□□ 0.07
Ercc1-201ENSMUST00000003645 Gcom1E9PZ54 550 aa15.47■□□□□ 0.07
Ercc1-201ENSMUST00000003645 Myo1eE9Q634 1107 aa15.47■□□□□ 0.07
Ercc1-201ENSMUST00000003645 Vti1aO89116 217 aa15.47■□□□□ 0.07
Ercc1-201ENSMUST00000003645 Fam167bP17257 162 aa15.47■□□□□ 0.07
Ercc1-201ENSMUST00000003645 Sh3bp1P55194 680 aa15.47■□□□□ 0.07
Ercc1-201ENSMUST00000003645 Fam193bQ3U2K0 892 aa15.47■□□□□ 0.07
Ercc1-201ENSMUST00000003645 MyzapQ3UIJ9 466 aa15.47■□□□□ 0.07
Ercc1-201ENSMUST00000003645 Cyp2j11Q3UNV2 504 aa15.47■□□□□ 0.07
Ercc1-201ENSMUST00000003645 Nxf2Q4ZGD8 691 aa15.47■□□□□ 0.07
Ercc1-201ENSMUST00000003645 Papss1Q60967 624 aa15.47■□□□□ 0.07
Ercc1-201ENSMUST00000003645 Dnajc1Q61712 552 aaKnown RBP15.47■□□□□ 0.07
Ercc1-201ENSMUST00000003645 RadilQ69Z89 1099 aa15.47■□□□□ 0.07
Ercc1-201ENSMUST00000003645 Pdcl2Q78Y63 240 aa15.47■□□□□ 0.07
Ercc1-201ENSMUST00000003645 Tas2r115Q7M719 310 aa15.47■□□□□ 0.07
Ercc1-201ENSMUST00000003645 Rhbdf2Q80WQ6 827 aa15.47■□□□□ 0.07
Ercc1-201ENSMUST00000003645 IntS13Q8QZV7 732 aa15.47■□□□□ 0.07
Ercc1-201ENSMUST00000003645 Hip1Q8VD75 1029 aaKnown RBP15.47■□□□□ 0.07
Ercc1-201ENSMUST00000003645 Pde2aQ922S4 916 aa15.47■□□□□ 0.07
Ercc1-201ENSMUST00000003645 AticQ9CWJ9 592 aaKnown RBP15.47■□□□□ 0.07
Ercc1-201ENSMUST00000003645 Tubb4aQ9D6F9 444 aa15.47■□□□□ 0.07
Ercc1-201ENSMUST00000003645 Q9D9D9 101 aa15.47■□□□□ 0.07
Ercc1-201ENSMUST00000003645 DpysQ9EQF5 519 aa15.47■□□□□ 0.07
Ercc1-201ENSMUST00000003645 NckipsdQ9ESJ4 714 aa15.47■□□□□ 0.07
Ercc1-201ENSMUST00000003645 Piwil1Q9JMB7 862 aa15.47■□□□□ 0.07
Ercc1-201ENSMUST00000003645 Adam17Q9Z0F8 827 aa15.47■□□□□ 0.07
Ercc1-201ENSMUST00000003645 Igkv5-45A0A0B4J1J1 115 aa15.46■□□□□ 0.07
Ercc1-201ENSMUST00000003645 Mocs3A2BDX3 460 aaKnown RBP15.46■□□□□ 0.07
Ercc1-201ENSMUST00000003645 Cyp2t4E9PWV0 503 aa15.46■□□□□ 0.07
Ercc1-201ENSMUST00000003645 Gm3371F7CQW8 167 aa15.46■□□□□ 0.07
Ercc1-201ENSMUST00000003645 Rpl7aP12970 266 aaKnown RBP15.46■□□□□ 0.07
Ercc1-201ENSMUST00000003645 Ppp3ccP48455 513 aa15.46■□□□□ 0.07
Ercc1-201ENSMUST00000003645 HpdP49429 393 aa15.46■□□□□ 0.07
Ercc1-201ENSMUST00000003645 Ephb3P54754 993 aaKnown RBP15.46■□□□□ 0.07
Ercc1-201ENSMUST00000003645 Gng11P61953 73 aa15.46■□□□□ 0.07
Retrieved 100 of 22,080 RNA–protein pairs in 25.6 ms