RNA–Protein interactions for RNA: YIR001C

SGN1, Transcript of Cytoplasmic RNA-binding protein, yeastyeast

Gene SGN1, Length 753 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SGN1YIR001C YLR307C-AQ3E825 87 aa2.47□□□□□ -2.01
SGN1YIR001C YMR122W-AQ3E842 84 aa2.47□□□□□ -2.01
SGN1YIR001C YBR298C-AQ8TGK4 73 aa2.47□□□□□ -2.01
SGN1YIR001C GCV3P39726 170 aaPredicted RBP2.46□□□□□ -2.02
SGN1YIR001C YIL163CP40448 117 aa2.46□□□□□ -2.02
SGN1YIR001C YIL059CP40520 121 aa2.46□□□□□ -2.02
SGN1YIR001C YFR045WP43617 309 aa2.46□□□□□ -2.02
SGN1YIR001C YGR026WP53217 278 aa2.46□□□□□ -2.02
SGN1YIR001C PAU4P53427 120 aa2.46□□□□□ -2.02
SGN1YIR001C DXO1Q06349 442 aa2.46□□□□□ -2.02
SGN1YIR001C YDR029WQ12111 104 aa2.46□□□□□ -2.02
SGN1YIR001C YGL194C-AQ2V2P6 80 aa2.46□□□□□ -2.02
SGN1YIR001C PAU1P0CE88 120 aa2.45□□□□□ -2.02
SGN1YIR001C PAU14P0CE89 120 aa2.45□□□□□ -2.02
SGN1YIR001C PAU6P0CE90 120 aa2.45□□□□□ -2.02
SGN1YIR001C PAU18P0CE91 120 aa2.45□□□□□ -2.02
SGN1YIR001C PAU8P0CE92 120 aa2.45□□□□□ -2.02
SGN1YIR001C PAU11P0CE93 120 aa2.45□□□□□ -2.02
SGN1YIR001C TIR1P10863 254 aa2.45□□□□□ -2.02
SGN1YIR001C UBC5P15732 148 aa2.45□□□□□ -2.02
SGN1YIR001C RPL16AP26784 199 aaKnown RBP2.45□□□□□ -2.02
SGN1YIR001C FZF1P32805 299 aa2.45□□□□□ -2.02
SGN1YIR001C PAU13P38725 120 aa2.45□□□□□ -2.02
SGN1YIR001C YHR140WP38842 239 aa2.45□□□□□ -2.02
SGN1YIR001C CYB5P40312 120 aa2.45□□□□□ -2.02
SGN1YIR001C ARC15P40518 154 aaRIP-Chip data2.45□□□□□ -2.02not detected
SGN1YIR001C MMS2P53152 137 aa2.45□□□□□ -2.02
SGN1YIR001C SNA2P56508 79 aa2.45□□□□□ -2.02
SGN1YIR001C PAU10Q03050 120 aa2.45□□□□□ -2.02
SGN1YIR001C TVP18Q04767 167 aa2.45□□□□□ -2.02
SGN1YIR001C PAU20Q08322 120 aa2.45□□□□□ -2.02
SGN1YIR001C CSM4Q08955 156 aa2.45□□□□□ -2.02
SGN1YIR001C PAU9Q3E770 120 aa2.45□□□□□ -2.02
SGN1YIR001C RPS22AP0C0W1 130 aaKnown RBP2.44□□□□□ -2.02
SGN1YIR001C DDR48P18899 430 aaKnown RBP2.44□□□□□ -2.02
SGN1YIR001C SEC59P20048 519 aa2.44□□□□□ -2.02
SGN1YIR001C SPC25P40014 221 aa2.44□□□□□ -2.02
SGN1YIR001C ERG28P40030 148 aa2.44□□□□□ -2.02
SGN1YIR001C PGD1P40356 397 aa2.44□□□□□ -2.02
SGN1YIR001C ATP19P81451 68 aa2.44□□□□□ -2.02
SGN1YIR001C SNU23Q12368 194 aaPredicted RBP2.44□□□□□ -2.02
SGN1YIR001C MRPL31P14063 131 aaPredicted RBP2.43□□□□□ -2.02
SGN1YIR001C SHG1P38337 142 aa2.43□□□□□ -2.02
SGN1YIR001C JAC1P53193 184 aa2.43□□□□□ -2.02
SGN1YIR001C YDR010CQ12426 110 aa2.43□□□□□ -2.02
SGN1YIR001C RPL27AP0C2H6 136 aaKnown RBP2.42□□□□□ -2.02
SGN1YIR001C RIB5P38145 238 aa2.42□□□□□ -2.02
SGN1YIR001C YBR090CP38253 122 aa2.42□□□□□ -2.02
SGN1YIR001C MHR1Q06630 226 aa2.42□□□□□ -2.02
SGN1YIR001C MRP49P32388 137 aa2.41□□□□□ -2.02
SGN1YIR001C MRPS9P38120 278 aa2.41□□□□□ -2.02
SGN1YIR001C YBR209WP38311 105 aa2.41□□□□□ -2.02
SGN1YIR001C RPB11P38902 120 aa2.41□□□□□ -2.02
SGN1YIR001C YAL064WP39711 94 aa2.41□□□□□ -2.02
SGN1YIR001C SEC72P39742 193 aaKnown RBP2.41□□□□□ -2.02
SGN1YIR001C CIN5P40917 295 aa2.41□□□□□ -2.02
SGN1YIR001C MOG1P47123 218 aa2.41□□□□□ -2.02
SGN1YIR001C OST3P48439 350 aa2.41□□□□□ -2.02
SGN1YIR001C THG1P53215 237 aaKnown RBP2.41□□□□□ -2.02
SGN1YIR001C DAD3P69850 94 aa2.41□□□□□ -2.02
SGN1YIR001C GPI19Q04082 140 aa2.41□□□□□ -2.02
SGN1YIR001C SMT3Q12306 101 aaKnown RBP2.41□□□□□ -2.02
SGN1YIR001C COX19Q3E731 98 aa2.41□□□□□ -2.02
SGN1YIR001C YCL001W-BQ96VH2 84 aa2.41□□□□□ -2.02
SGN1YIR001C VMA7P39111 118 aa2.4□□□□□ -2.03
SGN1YIR001C AIM19P40502 157 aa2.4□□□□□ -2.03
SGN1YIR001C DCV1P43595 202 aa2.4□□□□□ -2.03
SGN1YIR001C GIM5Q04493 163 aa2.4□□□□□ -2.03
SGN1YIR001C NAT3Q06504 195 aa2.4□□□□□ -2.03
SGN1YIR001C YBL112CQ3E7Y4 105 aa2.4□□□□□ -2.03
SGN1YIR001C HYP2P23301 157 aaKnown RBP2.39□□□□□ -2.03
SGN1YIR001C MSK1P32048 576 aa2.39□□□□□ -2.03
SGN1YIR001C ZRT1P32804 376 aa2.39□□□□□ -2.03
SGN1YIR001C RPL32P38061 130 aaKnown RBP2.39□□□□□ -2.03
SGN1YIR001C SMP1P38128 452 aa2.39□□□□□ -2.03
SGN1YIR001C PEX22P39718 180 aa2.39□□□□□ -2.03
SGN1YIR001C RPC10P40422 70 aa2.39□□□□□ -2.03
SGN1YIR001C YGL088WP53151 121 aa2.39□□□□□ -2.03
SGN1YIR001C GTO3Q04806 366 aa2.39□□□□□ -2.03
SGN1YIR001C YLR194CQ05777 254 aa2.39□□□□□ -2.03
SGN1YIR001C DCN1Q12395 269 aa2.39□□□□□ -2.03
SGN1YIR001C ENV10Q99382 181 aa2.39□□□□□ -2.03
SGN1YIR001C QRI5P32344 111 aa2.38□□□□□ -2.03
SGN1YIR001C AIM29P36154 155 aa2.38□□□□□ -2.03
SGN1YIR001C PAU7P39545 55 aa2.38□□□□□ -2.03
SGN1YIR001C PAU5P43575 122 aa2.38□□□□□ -2.03
SGN1YIR001C HIT1P46973 164 aa2.38□□□□□ -2.03
SGN1YIR001C FMP49A0A023PZB3 126 aa2.37□□□□□ -2.03
SGN1YIR001C ADH2P00331 348 aaKnown RBP2.37□□□□□ -2.03
SGN1YIR001C SRP21P32342 167 aa2.37□□□□□ -2.03
SGN1YIR001C YBL081WP38180 368 aaKnown RBP2.37□□□□□ -2.03
SGN1YIR001C SRP14P38985 146 aa2.37□□□□□ -2.03
SGN1YIR001C YER076CP40049 302 aa2.37□□□□□ -2.03
SGN1YIR001C YER085CP40058 173 aa2.37□□□□□ -2.03
SGN1YIR001C YGR149WP48236 432 aa2.37□□□□□ -2.03
SGN1YIR001C EOS1P53938 366 aa2.37□□□□□ -2.03
SGN1YIR001C YCL021W-AQ96VH3 125 aa2.37□□□□□ -2.03
SGN1YIR001C YKR070WP36151 352 aaKnown RBP2.36□□□□□ -2.03
SGN1YIR001C HAC1P41546 238 aa2.36□□□□□ -2.03
SGN1YIR001C YGL149WP53116 101 aa2.36□□□□□ -2.03
Retrieved 100 of 5,963 RNA–protein pairs in 66.5 ms