RNA–Protein interactions for RNA: YDL139C

SCM3, Transcript of Nonhistone component of centromeric chromatin, yeastyeast

Gene SCM3, Length 672 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SCM3YDL139C RPA43P46669 326 aa3.79□□□□□ -1.8
SCM3YDL139C YMR244WQ04018 355 aa3.79□□□□□ -1.8
SCM3YDL139C SDH7Q04401 133 aa3.79□□□□□ -1.8
SCM3YDL139C YDL022C-AP0C5L6 82 aa3.78□□□□□ -1.8
SCM3YDL139C YHR212W-AP0CX91 67 aa3.78□□□□□ -1.8
SCM3YDL139C SUR2P38992 349 aa3.78□□□□□ -1.8
SCM3YDL139C VHS2P40463 436 aa3.78□□□□□ -1.8
SCM3YDL139C ABM1P47146 123 aa3.78□□□□□ -1.8
SCM3YDL139C MIC26P50087 233 aa3.78□□□□□ -1.8
SCM3YDL139C TPT1Q12272 230 aaKnown RBP3.78□□□□□ -1.8
SCM3YDL139C MRPL23Q12487 163 aaPredicted RBP3.78□□□□□ -1.8
SCM3YDL139C HMRA1P0CY11 126 aa3.77□□□□□ -1.81
SCM3YDL139C AME1P38313 324 aa3.77□□□□□ -1.81
SCM3YDL139C YPI1P43587 155 aa3.77□□□□□ -1.81
SCM3YDL139C YDL186WP48568 277 aa3.77□□□□□ -1.81
SCM3YDL139C THG1P53215 237 aaKnown RBP3.77□□□□□ -1.81
SCM3YDL139C DAD1Q12248 94 aa3.77□□□□□ -1.81
SCM3YDL139C AGA1P32323 725 aa3.76□□□□□ -1.81
SCM3YDL139C YKL075CP36083 450 aa3.76□□□□□ -1.81
SCM3YDL139C MRPL11P36521 249 aaPredicted RBP3.76□□□□□ -1.81
SCM3YDL139C SNF11P38956 169 aa3.76□□□□□ -1.81
SCM3YDL139C ERV14P53173 138 aa3.76□□□□□ -1.81
SCM3YDL139C YIP3P53633 176 aa3.76□□□□□ -1.81
SCM3YDL139C SPO24Q3E752 67 aa3.76□□□□□ -1.81
SCM3YDL139C YLR342W-AQ3E810 57 aa3.76□□□□□ -1.81
SCM3YDL139C NRG2P38082 220 aa3.75□□□□□ -1.81
SCM3YDL139C YEL067CP39978 195 aa3.75□□□□□ -1.81
SCM3YDL139C YER188WP40103 239 aa3.75□□□□□ -1.81
SCM3YDL139C UBC7Q02159 165 aa3.75□□□□□ -1.81
SCM3YDL139C GPI19Q04082 140 aa3.75□□□□□ -1.81
SCM3YDL139C NAT5Q08689 176 aa3.75□□□□□ -1.81
SCM3YDL139C YBR200W-AQ3E755 54 aa3.75□□□□□ -1.81
SCM3YDL139C YMR230W-AQ3E7B5 62 aa3.75□□□□□ -1.81
SCM3YDL139C RPS22BQ3E7Y3 130 aaKnown RBP3.75□□□□□ -1.81
SCM3YDL139C YPR014CQ6B0W2 109 aa3.75□□□□□ -1.81
SCM3YDL139C SEC11P15367 167 aa3.74□□□□□ -1.81
SCM3YDL139C FYV4P38783 130 aaPredicted RBP3.74□□□□□ -1.81
SCM3YDL139C IRC22P40006 225 aa3.74□□□□□ -1.81
SCM3YDL139C YNL194CP40169 301 aa3.74□□□□□ -1.81
SCM3YDL139C MRPL49P40858 161 aaPredicted RBP3.74□□□□□ -1.81
SCM3YDL139C POP3P53833 195 aaPredicted RBP3.74□□□□□ -1.81
SCM3YDL139C GTO3Q04806 366 aa3.74□□□□□ -1.81
SCM3YDL139C YDL157CQ12082 118 aa3.74□□□□□ -1.81
SCM3YDL139C TIM22Q12328 207 aa3.74□□□□□ -1.81
SCM3YDL139C YNL146C-AQ3E7Z1 64 aa3.74□□□□□ -1.81
SCM3YDL139C SAL1D6W196 494 aa3.73□□□□□ -1.81
SCM3YDL139C COX2P00410 251 aa3.73□□□□□ -1.81
SCM3YDL139C VAR1P02381 398 aa3.73□□□□□ -1.81
SCM3YDL139C FUN14P18411 198 aa3.73□□□□□ -1.81
SCM3YDL139C RPL16BP26785 198 aaKnown RBP3.73□□□□□ -1.81
SCM3YDL139C YKL102CP34249 101 aa3.73□□□□□ -1.81
SCM3YDL139C RRT13P40042 185 aa3.73□□□□□ -1.81
SCM3YDL139C VPS71Q03433 280 aa3.73□□□□□ -1.81
SCM3YDL139C MRPS8Q03799 155 aa3.73□□□□□ -1.81
SCM3YDL139C WIP1Q2V2P8 89 aa3.73□□□□□ -1.81
SCM3YDL139C KRE9P39005 276 aa3.72□□□□□ -1.81
SCM3YDL139C LSM8P47093 109 aaKnown RBP3.72□□□□□ -1.81
SCM3YDL139C PPT2Q12036 173 aa3.72□□□□□ -1.81
SCM3YDL139C CCW12Q12127 133 aa3.72□□□□□ -1.81
SCM3YDL139C CPR1P14832 162 aaKnown RBP3.71□□□□□ -1.82
SCM3YDL139C TCA17P32613 152 aa3.71□□□□□ -1.82
SCM3YDL139C PAU16P35994 123 aa3.71□□□□□ -1.82
SCM3YDL139C ECM33P38248 429 aaKnown RBP3.71□□□□□ -1.82
SCM3YDL139C VTC1P40046 129 aaRIP-Chip data3.71□□□□□ -1.82not detected
SCM3YDL139C YER076CP40049 302 aa3.71□□□□□ -1.82
SCM3YDL139C BET5Q03630 159 aa3.71□□□□□ -1.82
SCM3YDL139C DPP1Q05521 289 aa3.71□□□□□ -1.82
SCM3YDL139C MHR1Q06630 226 aa3.71□□□□□ -1.82
SCM3YDL139C RPL12AP0CX53 165 aaKnown RBP3.7□□□□□ -1.82
SCM3YDL139C RPL12BP0CX54 165 aa3.7□□□□□ -1.82
SCM3YDL139C MRPL20P22354 195 aaPredicted RBP3.7□□□□□ -1.82
SCM3YDL139C YCR023CP25351 611 aa3.7□□□□□ -1.82
SCM3YDL139C YHR140WP38842 239 aa3.7□□□□□ -1.82
SCM3YDL139C YGL230CP53074 147 aa3.7□□□□□ -1.82
SCM3YDL139C YGL088WP53151 121 aa3.7□□□□□ -1.82
SCM3YDL139C MGR2Q02889 113 aa3.7□□□□□ -1.82
SCM3YDL139C CMC2Q3E7A4 109 aa3.7□□□□□ -1.82
SCM3YDL139C COA3Q3E7B2 85 aa3.7□□□□□ -1.82
SCM3YDL139C YCL021W-AQ96VH3 125 aa3.7□□□□□ -1.82
SCM3YDL139C MRPL44P19956 98 aa3.69□□□□□ -1.82
SCM3YDL139C PAU7P39545 55 aa3.69□□□□□ -1.82
SCM3YDL139C GRH1Q04410 372 aaKnown RBP3.69□□□□□ -1.82
SCM3YDL139C YLR042CQ07990 161 aa3.69□□□□□ -1.82
SCM3YDL139C DGA1Q08650 418 aa3.69□□□□□ -1.82
SCM3YDL139C Q0255P03881 472 aa3.68□□□□□ -1.82
SCM3YDL139C RPL27AP0C2H6 136 aaKnown RBP3.68□□□□□ -1.82
SCM3YDL139C KTI12P34253 313 aaKnown RBP3.68□□□□□ -1.82
SCM3YDL139C HAC1P41546 238 aa3.68□□□□□ -1.82
SCM3YDL139C YDR042CQ03205 200 aa3.68□□□□□ -1.82
SCM3YDL139C FCF1Q05498 189 aaPredicted RBP3.68□□□□□ -1.82
SCM3YDL139C POM33Q12164 279 aa3.68□□□□□ -1.82
SCM3YDL139C YOR097CQ12274 175 aaPredicted RBP3.68□□□□□ -1.82
SCM3YDL139C AUA1P32450 94 aa3.67□□□□□ -1.82
SCM3YDL139C YNR077CP53758 84 aa3.67□□□□□ -1.82
SCM3YDL139C DIA1P54005 336 aa3.67□□□□□ -1.82
SCM3YDL139C AIM34Q03673 198 aa3.67□□□□□ -1.82
SCM3YDL139C PRM3Q08931 133 aa3.67□□□□□ -1.82
SCM3YDL139C PFY1P07274 126 aa3.66□□□□□ -1.82
SCM3YDL139C HMRA2P0CY13 119 aa3.66□□□□□ -1.82
SCM3YDL139C YCR001WP25347 104 aa3.66□□□□□ -1.82
Retrieved 100 of 5,963 RNA–protein pairs in 17.4 ms