RNA–Protein interactions for RNA: YCL005W

LDB16, Transcript of Protein of unknown function, yeastyeast

Gene LDB16, Length 771 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
LDB16YCL005W YHR022CP38763 256 aa4.92□□□□□ -1.62
LDB16YCL005W YHR140WP38842 239 aa4.92□□□□□ -1.62
LDB16YCL005W MRPL49P40858 161 aaPredicted RBP4.92□□□□□ -1.62
LDB16YCL005W CCW12Q12127 133 aa4.92□□□□□ -1.62
LDB16YCL005W ERG27Q12452 347 aaKnown RBP4.92□□□□□ -1.62
LDB16YCL005W YFL068WP0CX99 160 aa4.91□□□□□ -1.62
LDB16YCL005W YLL066W-AP0CY00 160 aa4.91□□□□□ -1.62
LDB16YCL005W YLL067W-AP0CY01 160 aa4.91□□□□□ -1.62
LDB16YCL005W TEM1P38987 245 aa4.91□□□□□ -1.62
LDB16YCL005W YER135CP40082 130 aa4.91□□□□□ -1.62
LDB16YCL005W SIM1P40472 476 aa4.91□□□□□ -1.62
LDB16YCL005W ERV14P53173 138 aa4.91□□□□□ -1.62
LDB16YCL005W YHR212W-AP0CX91 67 aa4.9□□□□□ -1.63
LDB16YCL005W UTR5P32630 166 aa4.9□□□□□ -1.63
LDB16YCL005W GSP1P32835 219 aaKnown RBP4.9□□□□□ -1.63
LDB16YCL005W GSP2P32836 220 aaKnown RBP4.9□□□□□ -1.63
LDB16YCL005W CDC40P40968 455 aaPredicted RBP4.9□□□□□ -1.63
LDB16YCL005W KEG1P43614 200 aa4.9□□□□□ -1.63
LDB16YCL005W MSA1Q08471 629 aa4.9□□□□□ -1.63
LDB16YCL005W YGR035W-AQ45U48 73 aa4.9□□□□□ -1.63
LDB16YCL005W FUN14P18411 198 aa4.89□□□□□ -1.63
LDB16YCL005W ALG13P53178 202 aa4.89□□□□□ -1.63
LDB16YCL005W YMR244WQ04018 355 aa4.89□□□□□ -1.63
LDB16YCL005W AGA1P32323 725 aa4.88□□□□□ -1.63
LDB16YCL005W YBR144CP34215 104 aa4.88□□□□□ -1.63
LDB16YCL005W YKL102CP34249 101 aa4.88□□□□□ -1.63
LDB16YCL005W PAU16P35994 123 aa4.88□□□□□ -1.63
LDB16YCL005W MPC2P38857 129 aa4.88□□□□□ -1.63
LDB16YCL005W YNL200CP40165 246 aaKnown RBP4.88□□□□□ -1.63
LDB16YCL005W BRP1P53194 125 aa4.88□□□□□ -1.63
LDB16YCL005W CNL1Q06333 122 aa4.88□□□□□ -1.63
LDB16YCL005W TAR1Q8TGM6 124 aa4.88□□□□□ -1.63
LDB16YCL005W YOL085CQ99345 113 aa4.88□□□□□ -1.63
LDB16YCL005W HTL1Q9URQ5 78 aa4.88□□□□□ -1.63
LDB16YCL005W VAR1P02381 398 aa4.87□□□□□ -1.63
LDB16YCL005W MRPL44P19956 98 aa4.87□□□□□ -1.63
LDB16YCL005W ECM33P38248 429 aaKnown RBP4.87□□□□□ -1.63
LDB16YCL005W MIG3P39943 394 aa4.87□□□□□ -1.63
LDB16YCL005W YJL028WP47062 111 aa4.87□□□□□ -1.63
LDB16YCL005W MIC26P50087 233 aa4.87□□□□□ -1.63
LDB16YCL005W MRPS8Q03799 155 aa4.87□□□□□ -1.63
LDB16YCL005W TVP18Q04767 167 aa4.87□□□□□ -1.63
LDB16YCL005W LSO2Q3E772 92 aaKnown RBP4.87□□□□□ -1.63
LDB16YCL005W YKR032WP36127 104 aa4.86□□□□□ -1.63
LDB16YCL005W FYV7Q12247 151 aa4.86□□□□□ -1.63
LDB16YCL005W YBR200W-AQ3E755 54 aa4.86□□□□□ -1.63
LDB16YCL005W Q0255P03881 472 aa4.85□□□□□ -1.63
LDB16YCL005W AQY1P0CD91 305 aa4.85□□□□□ -1.63
LDB16YCL005W SCM4P32564 187 aa4.85□□□□□ -1.63
LDB16YCL005W PET8P38921 284 aa4.85□□□□□ -1.63
LDB16YCL005W POP3P53833 195 aaPredicted RBP4.85□□□□□ -1.63
LDB16YCL005W YDR366CP87287 132 aa4.85□□□□□ -1.63
LDB16YCL005W YPR014CQ6B0W2 109 aa4.85□□□□□ -1.63
LDB16YCL005W UTP20P35194 2493 aaKnown RBP4.84□□□□□ -1.63
LDB16YCL005W YCR023CP25351 611 aa4.84□□□□□ -1.63
LDB16YCL005W KTI12P34253 313 aaKnown RBP4.84□□□□□ -1.63
LDB16YCL005W YER076CP40049 302 aa4.84□□□□□ -1.63
LDB16YCL005W AGE2P40529 298 aa4.84□□□□□ -1.63
LDB16YCL005W DUO1P53168 247 aaKnown RBP4.84□□□□□ -1.63
LDB16YCL005W YIL014C-AQ02598 104 aa4.84□□□□□ -1.63
LDB16YCL005W GRH1Q04410 372 aaKnown RBP4.84□□□□□ -1.63
LDB16YCL005W DPP1Q05521 289 aa4.84□□□□□ -1.63
LDB16YCL005W TPT1Q12272 230 aaKnown RBP4.84□□□□□ -1.63
LDB16YCL005W SAL1D6W196 494 aa4.83□□□□□ -1.64
LDB16YCL005W PFY1P07274 126 aa4.83□□□□□ -1.64
LDB16YCL005W RPL42AP0CX27 106 aaKnown RBP4.83□□□□□ -1.64
LDB16YCL005W RPL42BP0CX28 106 aaKnown RBP4.83□□□□□ -1.64
LDB16YCL005W HOT13P36078 116 aa4.83□□□□□ -1.64
LDB16YCL005W ATP23P53722 227 aa4.83□□□□□ -1.64
LDB16YCL005W YLR050CQ12155 161 aaKnown RBP4.83□□□□□ -1.64
LDB16YCL005W ATP5P09457 212 aa4.82□□□□□ -1.64
LDB16YCL005W RPL2AP0CX45 254 aaKnown RBP4.82□□□□□ -1.64
LDB16YCL005W RPL2BP0CX46 254 aaKnown RBP4.82□□□□□ -1.64
LDB16YCL005W RPS11AP0CX47 156 aaKnown RBP4.82□□□□□ -1.64
LDB16YCL005W RPS11BP0CX48 156 aaKnown RBP4.82□□□□□ -1.64
LDB16YCL005W RPL16BP26785 198 aaKnown RBP4.82□□□□□ -1.64
LDB16YCL005W HAC1P41546 238 aa4.82□□□□□ -1.64
LDB16YCL005W YDR274CP87283 123 aa4.82□□□□□ -1.64
LDB16YCL005W MGR2Q02889 113 aa4.82□□□□□ -1.64
LDB16YCL005W PKR1Q03880 122 aaKnown RBP4.82□□□□□ -1.64
LDB16YCL005W MSC3Q05812 728 aa4.82□□□□□ -1.64
LDB16YCL005W YNL162W-AQ3E7A8 72 aa4.82□□□□□ -1.64
LDB16YCL005W RPL27BP0C2H7 136 aaKnown RBP4.81□□□□□ -1.64
LDB16YCL005W YCH1P42937 148 aa4.81□□□□□ -1.64
LDB16YCL005W SAE3P89114 91 aa4.81□□□□□ -1.64
LDB16YCL005W YDR042CQ03205 200 aa4.81□□□□□ -1.64
LDB16YCL005W AIM34Q03673 198 aa4.81□□□□□ -1.64
LDB16YCL005W NAT5Q08689 176 aa4.81□□□□□ -1.64
LDB16YCL005W YDL085C-AQ3E7B7 68 aaKnown RBP4.81□□□□□ -1.64
LDB16YCL005W SEC11P15367 167 aa4.8□□□□□ -1.64
LDB16YCL005W PRE1P22141 198 aaKnown RBP4.8□□□□□ -1.64
LDB16YCL005W YCR007CP25354 239 aa4.8□□□□□ -1.64
LDB16YCL005W MIG1P27705 504 aa4.8□□□□□ -1.64
LDB16YCL005W APS1P35181 156 aa4.8□□□□□ -1.64
LDB16YCL005W FYV4P38783 130 aaPredicted RBP4.8□□□□□ -1.64
LDB16YCL005W MSL1P40567 111 aaPredicted RBP4.8□□□□□ -1.64
LDB16YCL005W YFR035CP43608 114 aa4.8□□□□□ -1.64
LDB16YCL005W GLO1P50107 326 aa4.8□□□□□ -1.64
LDB16YCL005W YGL230CP53074 147 aa4.8□□□□□ -1.64
LDB16YCL005W FCF1Q05498 189 aaPredicted RBP4.8□□□□□ -1.64
Retrieved 100 of 5,963 RNA–protein pairs in 50.1 ms