RNA–Protein interactions for RNA: YBR082C

UBC4, Transcript of Ubiquitin-conjugating enzyme (E2), yeast

Gene UBC4, Length 447 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
UBC4	YBR082C	MIG3	P39943	394 aa		4.12	□□□□□ -1.75
UBC4	YBR082C	YER134C	P40081	178 aa		4.12	□□□□□ -1.75
UBC4	YBR082C	ERG27	Q12452	347 aa	Known RBP	4.12	□□□□□ -1.75
UBC4	YBR082C	VAR1	P02381	398 aa		4.11	□□□□□ -1.75
UBC4	YBR082C	Q0255	P03881	472 aa		4.11	□□□□□ -1.75
UBC4	YBR082C	MIG1	P27705	504 aa		4.11	□□□□□ -1.75
UBC4	YBR082C	GSP1	P32835	219 aa	Known RBP	4.1	□□□□□ -1.75
UBC4	YBR082C	GSP2	P32836	220 aa	Known RBP	4.1	□□□□□ -1.75
UBC4	YBR082C	ELF1	P36053	145 aa		4.1	□□□□□ -1.75
UBC4	YBR082C	TEM1	P38987	245 aa		4.1	□□□□□ -1.75
UBC4	YBR082C	YNL200C	P40165	246 aa	Known RBP	4.1	□□□□□ -1.75
UBC4	YBR082C	DUO1	P53168	247 aa	Known RBP	4.1	□□□□□ -1.75
UBC4	YBR082C	YDR274C	P87283	123 aa		4.1	□□□□□ -1.75
UBC4	YBR082C	GRH1	Q04410	372 aa	Known RBP	4.1	□□□□□ -1.75
UBC4	YBR082C	TVP18	Q04767	167 aa		4.1	□□□□□ -1.75
UBC4	YBR082C	YKR032W	P36127	104 aa		4.09	□□□□□ -1.75
UBC4	YBR082C	CDC40	P40968	455 aa	Predicted RBP	4.09	□□□□□ -1.75
UBC4	YBR082C	BRP1	P53194	125 aa		4.09	□□□□□ -1.75
UBC4	YBR082C	YDR366C	P87287	132 aa		4.09	□□□□□ -1.75
UBC4	YBR082C	YBR200W-A	Q3E755	54 aa		4.09	□□□□□ -1.75
UBC4	YBR082C	YPR014C	Q6B0W2	109 aa		4.09	□□□□□ -1.75
UBC4	YBR082C	YPR053C	Q6Q5F3	151 aa		4.09	□□□□□ -1.75
UBC4	YBR082C	HTL1	Q9URQ5	78 aa		4.09	□□□□□ -1.75
UBC4	YBR082C	RPL2A	P0CX45	254 aa	Known RBP	4.08	□□□□□ -1.76
UBC4	YBR082C	RPL2B	P0CX46	254 aa	Known RBP	4.08	□□□□□ -1.76
UBC4	YBR082C	RPS11A	P0CX47	156 aa	Known RBP	4.08	□□□□□ -1.76
UBC4	YBR082C	RPS11B	P0CX48	156 aa	Known RBP	4.08	□□□□□ -1.76
UBC4	YBR082C	RPL16B	P26785	198 aa	Known RBP	4.08	□□□□□ -1.76
UBC4	YBR082C	KTI12	P34253	313 aa	Known RBP	4.08	□□□□□ -1.76
UBC4	YBR082C	PAU16	P35994	123 aa		4.08	□□□□□ -1.76
UBC4	YBR082C	PET8	P38921	284 aa		4.08	□□□□□ -1.76
UBC4	YBR082C	SAL1	D6W196	494 aa		4.07	□□□□□ -1.76
UBC4	YBR082C	RPL42A	P0CX27	106 aa	Known RBP	4.07	□□□□□ -1.76
UBC4	YBR082C	RPL42B	P0CX28	106 aa	Known RBP	4.07	□□□□□ -1.76
UBC4	YBR082C	FUN14	P18411	198 aa		4.07	□□□□□ -1.76
UBC4	YBR082C	YCR023C	P25351	611 aa		4.07	□□□□□ -1.76
UBC4	YBR082C	YER076C	P40049	302 aa		4.07	□□□□□ -1.76
UBC4	YBR082C	VHS2	P40463	436 aa		4.07	□□□□□ -1.76
UBC4	YBR082C	YFR035C	P43608	114 aa		4.07	□□□□□ -1.76
UBC4	YBR082C	YJL028W	P47062	111 aa		4.07	□□□□□ -1.76
UBC4	YBR082C	ERV14	P53173	138 aa		4.07	□□□□□ -1.76
UBC4	YBR082C	ATP23	P53722	227 aa		4.07	□□□□□ -1.76
UBC4	YBR082C	YIL014C-A	Q02598	104 aa		4.07	□□□□□ -1.76
UBC4	YBR082C	AIM34	Q03673	198 aa		4.07	□□□□□ -1.76
UBC4	YBR082C	MSC3	Q05812	728 aa		4.07	□□□□□ -1.76
UBC4	YBR082C	CNL1	Q06333	122 aa		4.07	□□□□□ -1.76
UBC4	YBR082C	ISU2	Q12056	156 aa		4.07	□□□□□ -1.76
UBC4	YBR082C	POP3	P53833	195 aa	Predicted RBP	4.06	□□□□□ -1.76
UBC4	YBR082C	DPP1	Q05521	289 aa		4.06	□□□□□ -1.76
UBC4	YBR082C	PFY1	P07274	126 aa		4.05	□□□□□ -1.76
UBC4	YBR082C	RRT13	P40042	185 aa		4.05	□□□□□ -1.76
UBC4	YBR082C	YCH1	P42937	148 aa		4.05	□□□□□ -1.76
UBC4	YBR082C	GLO1	P50107	326 aa		4.05	□□□□□ -1.76
UBC4	YBR082C	COX12	Q01519	83 aa		4.05	□□□□□ -1.76
UBC4	YBR082C	MGR2	Q02889	113 aa		4.05	□□□□□ -1.76
UBC4	YBR082C	YLR042C	Q07990	161 aa		4.05	□□□□□ -1.76
UBC4	YBR082C	RPL27B	P0C2H7	136 aa	Known RBP	4.04	□□□□□ -1.76
UBC4	YBR082C	AQY1	P0CD91	305 aa		4.04	□□□□□ -1.76
UBC4	YBR082C	MRPL44	P19956	98 aa		4.04	□□□□□ -1.76
UBC4	YBR082C	PRE1	P22141	198 aa	Known RBP	4.04	□□□□□ -1.76
UBC4	YBR082C	PCL2	P25693	308 aa		4.04	□□□□□ -1.76
UBC4	YBR082C	MLF3	P32047	452 aa		4.04	□□□□□ -1.76
UBC4	YBR082C	PKR1	Q03880	122 aa	Known RBP	4.04	□□□□□ -1.76
UBC4	YBR082C	FYV7	Q12247	151 aa		4.04	□□□□□ -1.76
UBC4	YBR082C	TPT1	Q12272	230 aa	Known RBP	4.04	□□□□□ -1.76
UBC4	YBR082C	YLR122C	Q12312	125 aa		4.04	□□□□□ -1.76
UBC4	YBR082C	YCR075W-A	Q3E830	75 aa		4.04	□□□□□ -1.76
UBC4	YBR082C	YBR126W-A	Q8TGU7	68 aa		4.04	□□□□□ -1.76
UBC4	YBR082C	CYC7	P00045	113 aa		4.03	□□□□□ -1.76
UBC4	YBR082C	SCM4	P32564	187 aa		4.03	□□□□□ -1.76
UBC4	YBR082C	APS1	P35181	156 aa		4.03	□□□□□ -1.76
UBC4	YBR082C	YKR070W	P36151	352 aa	Known RBP	4.03	□□□□□ -1.76
UBC4	YBR082C	FYV4	P38783	130 aa	Predicted RBP	4.03	□□□□□ -1.76
UBC4	YBR082C	HAC1	P41546	238 aa		4.03	□□□□□ -1.76
UBC4	YBR082C	DCV1	P43595	202 aa		4.03	□□□□□ -1.76
UBC4	YBR082C	YPS5	P53057	165 aa		4.03	□□□□□ -1.76
UBC4	YBR082C	YDR042C	Q03205	200 aa		4.03	□□□□□ -1.76
UBC4	YBR082C	VPS71	Q03433	280 aa		4.03	□□□□□ -1.76
UBC4	YBR082C	FCF1	Q05498	189 aa	Predicted RBP	4.03	□□□□□ -1.76
UBC4	YBR082C	YLR281C	Q05863	155 aa		4.03	□□□□□ -1.76
UBC4	YBR082C	YLR050C	Q12155	161 aa	Known RBP	4.03	□□□□□ -1.76
UBC4	YBR082C	HMRA2	P0CY13	119 aa		4.02	□□□□□ -1.77
UBC4	YBR082C	YCR001W	P25347	104 aa		4.02	□□□□□ -1.77
UBC4	YBR082C	YNL217W	P40152	326 aa		4.02	□□□□□ -1.77
UBC4	YBR082C	TOS6	P48560	102 aa		4.02	□□□□□ -1.77
UBC4	YBR082C	DGA1	Q08650	418 aa		4.02	□□□□□ -1.77
UBC4	YBR082C	SCS22	Q6Q595	175 aa		4.02	□□□□□ -1.77
UBC4	YBR082C	ATP5	P09457	212 aa		4.01	□□□□□ -1.77
UBC4	YBR082C	URM1	P40554	99 aa	Predicted RBP	4.01	□□□□□ -1.77
UBC4	YBR082C	MSL1	P40567	111 aa	Predicted RBP	4.01	□□□□□ -1.77
UBC4	YBR082C	PMP3	P87284	55 aa		4.01	□□□□□ -1.77
UBC4	YBR082C	NAT5	Q08689	176 aa		4.01	□□□□□ -1.77
UBC4	YBR082C	LSO2	Q3E772	92 aa	Known RBP	4.01	□□□□□ -1.77
UBC4	YBR082C	YOR008C-A	Q3E7B9	74 aa		4.01	□□□□□ -1.77
UBC4	YBR082C	SEC11	P15367	167 aa		4	□□□□□ -1.77
UBC4	YBR082C	NRG2	P38082	220 aa		4	□□□□□ -1.77
UBC4	YBR082C	YBR209W	P38311	105 aa		4	□□□□□ -1.77
UBC4	YBR082C	YGL230C	P53074	147 aa		4	□□□□□ -1.77
UBC4	YBR082C	SAE3	P89114	91 aa		4	□□□□□ -1.77
UBC4	YBR082C	YMR103C	Q04436	120 aa		4	□□□□□ -1.77

Retrieved 100 of 5,963 RNA–protein pairs in 49.6 ms