RNA–Protein interactions for RNA: ENST00000641272.1

PHGDH-213, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 758 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-213ENST00000641272 BDNFP23560 247 aa17.88■□□□□ 0.45
PHGDH-213ENST00000641272 IFNAR2P48551 515 aa17.88■□□□□ 0.45
PHGDH-213ENST00000641272 ARHGAP8P85298 464 aa17.88■□□□□ 0.45
PHGDH-213ENST00000641272 CYP27A1Q02318 531 aa17.88■□□□□ 0.45
PHGDH-213ENST00000641272 FAM160A1Q05DH4 1040 aa17.88■□□□□ 0.45
PHGDH-213ENST00000641272 KCNB1Q14721 858 aa17.88■□□□□ 0.45
PHGDH-213ENST00000641272 CFAP221Q4G0U5 840 aa17.88■□□□□ 0.45
PHGDH-213ENST00000641272 PRR23CQ6ZRP0 262 aa17.88■□□□□ 0.45
PHGDH-213ENST00000641272 WDR5BQ86VZ2 330 aa17.88■□□□□ 0.45
PHGDH-213ENST00000641272 MMS19Q96T76 1030 aa17.88■□□□□ 0.45
PHGDH-213ENST00000641272 AGPAT3Q9NRZ7 376 aa17.88■□□□□ 0.45
PHGDH-213ENST00000641272 KBTBD4Q9NVX7 518 aa17.88■□□□□ 0.45
PHGDH-213ENST00000641272 SPAG17Q6Q759 2223 aa17.88■□□□□ 0.45
PHGDH-213ENST00000641272 GDF9O60383 454 aa17.87■□□□□ 0.45
PHGDH-213ENST00000641272 CLSTN1O94985 981 aa17.87■□□□□ 0.45
PHGDH-213ENST00000641272 USP17L7P0C7H9 530 aa17.87■□□□□ 0.45
PHGDH-213ENST00000641272 GJA4P35212 333 aa17.87■□□□□ 0.45
PHGDH-213ENST00000641272 USP46P62068 366 aa17.87■□□□□ 0.45
PHGDH-213ENST00000641272 ZNF268Q14587 947 aaPredicted RBP17.87■□□□□ 0.45
PHGDH-213ENST00000641272 PDGFRLQ15198 375 aa17.87■□□□□ 0.45
PHGDH-213ENST00000641272 MDH1BQ5I0G3 518 aa17.87■□□□□ 0.45
PHGDH-213ENST00000641272 SHC4Q6S5L8 630 aa17.87■□□□□ 0.45
PHGDH-213ENST00000641272 C4orf50Q6ZRC1 276 aa17.87■□□□□ 0.45
PHGDH-213ENST00000641272 WDR49Q8IV35 697 aa17.87■□□□□ 0.45
PHGDH-213ENST00000641272 SYNPOQ8N3V7 929 aa17.87■□□□□ 0.45
PHGDH-213ENST00000641272 CPA6Q8N4T0 437 aa17.87■□□□□ 0.45
PHGDH-213ENST00000641272 SH3RF2Q8TEC5 729 aa17.87■□□□□ 0.45
PHGDH-213ENST00000641272 CCDC127Q96BQ5 260 aa17.87■□□□□ 0.45
PHGDH-213ENST00000641272 FUBP3Q96I24 572 aaKnown RBP eCLIP17.87■□□□□ 0.45
PHGDH-213ENST00000641272 MRPL45Q9BRJ2 306 aaKnown RBP17.87■□□□□ 0.45
PHGDH-213ENST00000641272 BLZF1Q9H2G9 400 aa17.87■□□□□ 0.45
PHGDH-213ENST00000641272 DUS2Q9NX74 493 aaKnown RBP17.87■□□□□ 0.45
PHGDH-213ENST00000641272 CDH9Q9ULB4 789 aa17.87■□□□□ 0.45
PHGDH-213ENST00000641272 NME7Q9Y5B8 376 aa17.87■□□□□ 0.45
PHGDH-213ENST00000641272 TRDMT1O14717 391 aaKnown RBP17.86■□□□□ 0.45
PHGDH-213ENST00000641272 SCAMP3O14828 347 aaKnown RBP17.86■□□□□ 0.45
PHGDH-213ENST00000641272 KIAA0391O15091 583 aaKnown RBP17.86■□□□□ 0.45
PHGDH-213ENST00000641272 EIF3DO15371 548 aaKnown RBP eCLIP17.86■□□□□ 0.45
PHGDH-213ENST00000641272 TGFB1I1O43294 461 aa17.86■□□□□ 0.45
PHGDH-213ENST00000641272 CCDC192P0DO97 292 aa17.86■□□□□ 0.45
PHGDH-213ENST00000641272 GRIK1P39086 918 aa17.86■□□□□ 0.45
PHGDH-213ENST00000641272 IFRD2Q12894 506 aaPredicted RBP17.86■□□□□ 0.45
PHGDH-213ENST00000641272 SNRNP35Q16560 246 aaKnown RBP17.86■□□□□ 0.45
PHGDH-213ENST00000641272 DUOXA2Q1HG44 320 aa17.86■□□□□ 0.45
PHGDH-213ENST00000641272 FAM171BQ6P995 826 aa17.86■□□□□ 0.45
PHGDH-213ENST00000641272 EPM2AIP1Q7L775 607 aaPredicted RBP17.86■□□□□ 0.45
PHGDH-213ENST00000641272 TRAPPC11Q7Z392 1133 aa17.86■□□□□ 0.45
PHGDH-213ENST00000641272 RPLP0P6Q8NHW5 317 aa17.86■□□□□ 0.45
PHGDH-213ENST00000641272 SPATA18Q8TC71 538 aa17.86■□□□□ 0.45
PHGDH-213ENST00000641272 OSCP1Q8WVF1 389 aa17.86■□□□□ 0.45
PHGDH-213ENST00000641272 PCED1BQ96HM7 432 aa17.86■□□□□ 0.45
PHGDH-213ENST00000641272 MYRFLQ96LU7 910 aa17.86■□□□□ 0.45
PHGDH-213ENST00000641272 ZNF396Q96N95 335 aaPredicted RBP17.86■□□□□ 0.45
PHGDH-213ENST00000641272 CGRRF1Q99675 332 aa17.86■□□□□ 0.45
PHGDH-213ENST00000641272 P2RY13Q9BPV8 354 aa17.86■□□□□ 0.45
PHGDH-213ENST00000641272 DPEP3Q9H4B8 488 aa17.86■□□□□ 0.45
PHGDH-213ENST00000641272 ECT2Q9H8V3 914 aa17.86■□□□□ 0.45
PHGDH-213ENST00000641272 MAGEC2Q9UBF1 373 aaPredicted RBP17.86■□□□□ 0.45
PHGDH-213ENST00000641272 SLC8A2Q9UPR5 921 aa17.86■□□□□ 0.45
PHGDH-213ENST00000641272 AXIN1O15169 862 aa17.85■□□□□ 0.45
PHGDH-213ENST00000641272 CUTAO60888 179 aa17.85■□□□□ 0.45
PHGDH-213ENST00000641272 PPP6R2O75170 966 aa17.85■□□□□ 0.45
PHGDH-213ENST00000641272 RPP40O75818 363 aaKnown RBP17.85■□□□□ 0.45
PHGDH-213ENST00000641272 TNNI1P19237 187 aa17.85■□□□□ 0.45
PHGDH-213ENST00000641272 SDHBP21912 280 aa17.85■□□□□ 0.45
PHGDH-213ENST00000641272 WARSP23381 471 aaKnown RBP17.85■□□□□ 0.45
PHGDH-213ENST00000641272 ANXA13P27216 316 aa17.85■□□□□ 0.45
PHGDH-213ENST00000641272 CNR2P34972 360 aa17.85■□□□□ 0.45
PHGDH-213ENST00000641272 MAGEA11P43364 429 aa17.85■□□□□ 0.45
PHGDH-213ENST00000641272 GALK1P51570 392 aa17.85■□□□□ 0.45
PHGDH-213ENST00000641272 CACNA2D1P54289 1103 aa17.85■□□□□ 0.45
PHGDH-213ENST00000641272 CYP24A1Q07973 514 aa17.85■□□□□ 0.45
PHGDH-213ENST00000641272 PSMD2Q13200 908 aa17.85■□□□□ 0.45
PHGDH-213ENST00000641272 SF3A2Q15428 464 aaKnown RBP17.85■□□□□ 0.45
PHGDH-213ENST00000641272 SURF1Q15526 300 aa17.85■□□□□ 0.45
PHGDH-213ENST00000641272 EML3Q32P44 896 aa17.85■□□□□ 0.45
PHGDH-213ENST00000641272 LIMS2Q7Z4I7 341 aa17.85■□□□□ 0.45
PHGDH-213ENST00000641272 SDK1Q7Z5N4 2213 aa17.85■□□□□ 0.45
PHGDH-213ENST00000641272 KBTBD6Q86V97 674 aa17.85■□□□□ 0.45
PHGDH-213ENST00000641272 GRAMD1CQ8IYS0 662 aa17.85■□□□□ 0.45
PHGDH-213ENST00000641272 NETO1Q8TDF5 533 aa17.85■□□□□ 0.45
PHGDH-213ENST00000641272 EZH1Q92800 747 aaPredicted RBP17.85■□□□□ 0.45
PHGDH-213ENST00000641272 FNBP1Q96RU3 617 aa17.85■□□□□ 0.45
PHGDH-213ENST00000641272 RTKNQ9BST9 563 aa17.85■□□□□ 0.45
PHGDH-213ENST00000641272 BACH2Q9BYV9 841 aa17.85■□□□□ 0.45
PHGDH-213ENST00000641272 LRRC27Q9C0I9 530 aa17.85■□□□□ 0.45
PHGDH-213ENST00000641272 SNX25Q9H3E2 840 aa17.85■□□□□ 0.45
PHGDH-213ENST00000641272 CUEDC2Q9H467 287 aa17.85■□□□□ 0.45
PHGDH-213ENST00000641272 GCNT4Q9P109 453 aa17.85■□□□□ 0.45
PHGDH-213ENST00000641272 F8VP50 259 aa17.84■□□□□ 0.45
PHGDH-213ENST00000641272 LRP3O75074 770 aa17.84■□□□□ 0.45
PHGDH-213ENST00000641272 YEATS4O95619 227 aa17.84■□□□□ 0.45
PHGDH-213ENST00000641272 AFMP43652 599 aa17.84■□□□□ 0.45
PHGDH-213ENST00000641272 TNNC1P63316 161 aa17.84■□□□□ 0.45
PHGDH-213ENST00000641272 CSRP2Q16527 193 aa17.84■□□□□ 0.45
PHGDH-213ENST00000641272 SCARA5Q6ZMJ2 495 aa17.84■□□□□ 0.45
PHGDH-213ENST00000641272 HS2ST1Q7LGA3 356 aa17.84■□□□□ 0.45
PHGDH-213ENST00000641272 FSIP1Q8NA03 581 aa17.84■□□□□ 0.45
PHGDH-213ENST00000641272 OR6B3Q8NGW1 331 aa17.84■□□□□ 0.45
PHGDH-213ENST00000641272 SCFD1Q8WVM8 642 aa17.84■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 105.3 ms