RNA–Protein interactions for RNA: ENST00000636012.1

CACNA1A-221, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CACNA1A, Length 7,500 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-221ENST00000636012 IMPAD1Q9NX62 359 aa16.58■□□□□ 0.25
CACNA1A-221ENST00000636012 RRN3P2A6NIE6 340 aa16.58■□□□□ 0.24
CACNA1A-221ENST00000636012 STAG3L1P0CL83 205 aa16.58■□□□□ 0.24
CACNA1A-221ENST00000636012 TCF7P36402 384 aaPredicted RBP16.58■□□□□ 0.24
CACNA1A-221ENST00000636012 MCCD1P59942 119 aaPredicted RBP16.58■□□□□ 0.24
CACNA1A-221ENST00000636012 USP39Q53GS9 565 aaKnown RBP16.58■□□□□ 0.24
CACNA1A-221ENST00000636012 STX12Q86Y82 276 aa16.58■□□□□ 0.24
CACNA1A-221ENST00000636012 IQCF2Q8IXL9 164 aa16.58■□□□□ 0.24
CACNA1A-221ENST00000636012 EPN3Q9H201 632 aa16.58■□□□□ 0.24
CACNA1A-221ENST00000636012 APPL1Q9UKG1 709 aa16.58■□□□□ 0.24
CACNA1A-221ENST00000636012 PDXKO00764 312 aa16.58■□□□□ 0.24
CACNA1A-221ENST00000636012 SRP72O76094 671 aaKnown RBP16.58■□□□□ 0.24
CACNA1A-221ENST00000636012 ZNF543Q08ER8 600 aa16.58■□□□□ 0.24
CACNA1A-221ENST00000636012 EFHC1Q5JVL4 640 aa16.58■□□□□ 0.24
CACNA1A-221ENST00000636012 FAM71DQ8N9W8 422 aa16.58■□□□□ 0.24
CACNA1A-221ENST00000636012 DISP1Q96F81 1524 aa16.58■□□□□ 0.24
CACNA1A-221ENST00000636012 KDM6BO15054 1643 aa16.58■□□□□ 0.24
CACNA1A-221ENST00000636012 F5H5T6 163 aa16.58■□□□□ 0.24
CACNA1A-221ENST00000636012 VTNP04004 478 aa16.58■□□□□ 0.24
CACNA1A-221ENST00000636012 PARP9Q8IXQ6 854 aa16.58■□□□□ 0.24
CACNA1A-221ENST00000636012 PRPF18Q99633 342 aaKnown RBP16.58■□□□□ 0.24
CACNA1A-221ENST00000636012 CHST12Q9NRB3 414 aa16.58■□□□□ 0.24
CACNA1A-221ENST00000636012 CLTCQ00610 1675 aaKnown RBP16.58■□□□□ 0.24
CACNA1A-221ENST00000636012 VWA5AO00534 786 aa16.58■□□□□ 0.24
CACNA1A-221ENST00000636012 EXTL3O43909 919 aa16.58■□□□□ 0.24
CACNA1A-221ENST00000636012 HLA-DRAP01903 254 aa16.58■□□□□ 0.24
CACNA1A-221ENST00000636012 CKMP06732 381 aa16.58■□□□□ 0.24
CACNA1A-221ENST00000636012 SPRP35270 261 aaPredicted RBP16.58■□□□□ 0.24
CACNA1A-221ENST00000636012 SERPINB4P48594 390 aa16.58■□□□□ 0.24
CACNA1A-221ENST00000636012 CLK1P49759 484 aaKnown RBP16.58■□□□□ 0.24
CACNA1A-221ENST00000636012 RUNX1T1Q06455 604 aa16.58■□□□□ 0.24
CACNA1A-221ENST00000636012 SCFD2Q8WU76 684 aa16.58■□□□□ 0.24
CACNA1A-221ENST00000636012 H7C4K7 107 aa16.57■□□□□ 0.24
CACNA1A-221ENST00000636012 EPHB2P29323 1055 aa16.57■□□□□ 0.24
CACNA1A-221ENST00000636012 SEZ6Q53EL9 994 aa16.57■□□□□ 0.24
CACNA1A-221ENST00000636012 MED8Q96G25 268 aa16.57■□□□□ 0.24
CACNA1A-221ENST00000636012 CHP1Q99653 195 aa16.57■□□□□ 0.24
CACNA1A-221ENST00000636012 CCDC3Q9BQI4 270 aa16.57■□□□□ 0.24
CACNA1A-221ENST00000636012 TRIM51Q9BSJ1 452 aa16.57■□□□□ 0.24
CACNA1A-221ENST00000636012 CKBP12277 381 aa16.57■□□□□ 0.24
CACNA1A-221ENST00000636012 KRT35Q92764 455 aa16.57■□□□□ 0.24
CACNA1A-221ENST00000636012 NSUN4Q96CB9 384 aaKnown RBP16.57■□□□□ 0.24
CACNA1A-221ENST00000636012 MPP4Q96JB8 637 aa16.57■□□□□ 0.24
CACNA1A-221ENST00000636012 THUMPD3Q9BV44 507 aaKnown RBP16.57■□□□□ 0.24
CACNA1A-221ENST00000636012 HNRNPRO43390 633 aaKnown RBP16.57■□□□□ 0.24
CACNA1A-221ENST00000636012 SLC25A27O95847 323 aa16.57■□□□□ 0.24
CACNA1A-221ENST00000636012 HNRNPH2P55795 449 aaKnown RBP16.57■□□□□ 0.24
CACNA1A-221ENST00000636012 RPS7P62081 194 aaKnown RBP16.57■□□□□ 0.24
CACNA1A-221ENST00000636012 DPYDQ12882 1025 aa16.57■□□□□ 0.24
CACNA1A-221ENST00000636012 RCN1Q15293 331 aa16.57■□□□□ 0.24
CACNA1A-221ENST00000636012 SPATA4Q8NEY3 305 aa16.57■□□□□ 0.24
CACNA1A-221ENST00000636012 UCMAQ8WVF2 138 aa16.57■□□□□ 0.24
CACNA1A-221ENST00000636012 SCN3BQ9NY72 215 aa16.57■□□□□ 0.24
CACNA1A-221ENST00000636012 PSMC3IPQ9P2W1 217 aaPredicted RBP16.57■□□□□ 0.24
CACNA1A-221ENST00000636012 DCDC2CA8MYV0 355 aa16.57■□□□□ 0.24
CACNA1A-221ENST00000636012 RFC5P40937 340 aa16.57■□□□□ 0.24
CACNA1A-221ENST00000636012 SHC4Q6S5L8 630 aa16.57■□□□□ 0.24
CACNA1A-221ENST00000636012 MIB1Q86YT6 1006 aa16.57■□□□□ 0.24
CACNA1A-221ENST00000636012 DEFB129Q9H1M3 183 aa16.57■□□□□ 0.24
CACNA1A-221ENST00000636012 NSMCE4AQ9NXX6 385 aa16.57■□□□□ 0.24
CACNA1A-221ENST00000636012 PADI4Q9UM07 663 aa16.57■□□□□ 0.24
CACNA1A-221ENST00000636012 IPPQ9Y573 584 aa16.57■□□□□ 0.24
CACNA1A-221ENST00000636012 KIAA0391O15091 583 aaKnown RBP16.57■□□□□ 0.24
CACNA1A-221ENST00000636012 MAP3K6O95382 1288 aa16.57■□□□□ 0.24
CACNA1A-221ENST00000636012 TMED8Q6PL24 325 aaPredicted RBP16.57■□□□□ 0.24
CACNA1A-221ENST00000636012 NEDD1Q8NHV4 660 aa16.57■□□□□ 0.24
CACNA1A-221ENST00000636012 KIF2CQ99661 725 aa16.57■□□□□ 0.24
CACNA1A-221ENST00000636012 DDIT4Q9NX09 232 aa16.57■□□□□ 0.24
CACNA1A-221ENST00000636012 GPR182O15218 404 aa16.57■□□□□ 0.24
CACNA1A-221ENST00000636012 TRIM13O60858 407 aa16.57■□□□□ 0.24
CACNA1A-221ENST00000636012 PSMA3P25788 255 aa16.57■□□□□ 0.24
CACNA1A-221ENST00000636012 ARF3P61204 181 aaPredicted RBP16.57■□□□□ 0.24
CACNA1A-221ENST00000636012 ARF1P84077 181 aaKnown RBP16.57■□□□□ 0.24
CACNA1A-221ENST00000636012 NFIL3Q16649 462 aa16.57■□□□□ 0.24
CACNA1A-221ENST00000636012 TKFCQ3LXA3 575 aa16.57■□□□□ 0.24
CACNA1A-221ENST00000636012 MB21D2Q8IYB1 491 aaPredicted RBP16.57■□□□□ 0.24
CACNA1A-221ENST00000636012 GINS4Q9BRT9 223 aa16.57■□□□□ 0.24
CACNA1A-221ENST00000636012 RPS6KB2Q9UBS0 482 aa16.57■□□□□ 0.24
CACNA1A-221ENST00000636012 AXIN2Q9Y2T1 843 aa16.57■□□□□ 0.24
CACNA1A-221ENST00000636012 AP1G2O75843 785 aa16.56■□□□□ 0.24
CACNA1A-221ENST00000636012 FGFR1P11362 822 aa16.56■□□□□ 0.24
CACNA1A-221ENST00000636012 PSMC6P62333 389 aa16.56■□□□□ 0.24
CACNA1A-221ENST00000636012 EPC2Q52LR7 807 aa16.56■□□□□ 0.24
CACNA1A-221ENST00000636012 LRRC1Q9BTT6 524 aa16.56■□□□□ 0.24
CACNA1A-221ENST00000636012 CHORDC1Q9UHD1 332 aaPredicted RBP16.56■□□□□ 0.24
CACNA1A-221ENST00000636012 PREX2Q70Z35 1606 aa16.56■□□□□ 0.24
CACNA1A-221ENST00000636012 GALCP54803 685 aa16.56■□□□□ 0.24
CACNA1A-221ENST00000636012 SFSWAPQ12872 951 aaKnown RBP16.56■□□□□ 0.24
CACNA1A-221ENST00000636012 DDI1Q8WTU0 396 aa16.56■□□□□ 0.24
CACNA1A-221ENST00000636012 RPRD1AQ96P16 312 aaPredicted RBP16.56■□□□□ 0.24
CACNA1A-221ENST00000636012 CIPCQ9C0C6 399 aa16.56■□□□□ 0.24
CACNA1A-221ENST00000636012 SNX8Q9Y5X2 465 aa16.56■□□□□ 0.24
CACNA1A-221ENST00000636012 WDR19Q8NEZ3 1342 aa16.56■□□□□ 0.24
CACNA1A-221ENST00000636012 IGSF9BQ9UPX0 1349 aa16.56■□□□□ 0.24
CACNA1A-221ENST00000636012 MTF1Q14872 753 aa16.56■□□□□ 0.24
CACNA1A-221ENST00000636012 TTLL9Q3SXZ7 439 aa16.56■□□□□ 0.24
CACNA1A-221ENST00000636012 NMRK1Q9NWW6 199 aa16.56■□□□□ 0.24
CACNA1A-221ENST00000636012 PAK5Q9P286 719 aa16.56■□□□□ 0.24
CACNA1A-221ENST00000636012 SLC16A3O15427 465 aaKnown RBP16.56■□□□□ 0.24
CACNA1A-221ENST00000636012 PRUNE1Q86TP1 453 aa16.56■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms