RNA–Protein interactions for RNA: ENST00000635120.1

CSMD1-218, Transcript of CUB and Sushi multiple domains 1, humanhuman

APPRIS P2 TSL 5 BASIC

Gene CSMD1, Length 11,737 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-218ENST00000635120 EDRF1Q3B7T1 1238 aa9.46□□□□□ -0.9
CSMD1-218ENST00000635120 CLEC10AQ8IUN9 316 aa9.46□□□□□ -0.9
CSMD1-218ENST00000635120 CENPLQ8N0S6 344 aaPredicted RBP9.46□□□□□ -0.9
CSMD1-218ENST00000635120 CASKIN2Q8WXE0 1202 aa9.46□□□□□ -0.9
CSMD1-218ENST00000635120 ISCUQ9H1K1 167 aa9.46□□□□□ -0.9
CSMD1-218ENST00000635120 SLC38A7Q9NVC3 462 aa9.46□□□□□ -0.9
CSMD1-218ENST00000635120 PNPLA7Q6ZV29 1317 aa9.46□□□□□ -0.9
CSMD1-218ENST00000635120 NCF1BA6NI72 391 aaPredicted RBP9.46□□□□□ -0.9
CSMD1-218ENST00000635120 ASB14A6NK59 587 aa9.46□□□□□ -0.9
CSMD1-218ENST00000635120 NCF1CA8MVU1 366 aaPredicted RBP9.46□□□□□ -0.9
CSMD1-218ENST00000635120 TSC22D2O75157 780 aa9.46□□□□□ -0.9
CSMD1-218ENST00000635120 RHOBTB1O94844 696 aa9.46□□□□□ -0.9
CSMD1-218ENST00000635120 APOA4P06727 396 aa9.46□□□□□ -0.9
CSMD1-218ENST00000635120 NCF1P14598 390 aaPredicted RBP9.46□□□□□ -0.9
CSMD1-218ENST00000635120 SERPINB8P50452 374 aa9.46□□□□□ -0.9
CSMD1-218ENST00000635120 OTUD4Q01804 1114 aaKnown RBP9.46□□□□□ -0.9
CSMD1-218ENST00000635120 STK4Q13043 487 aa9.46□□□□□ -0.9
CSMD1-218ENST00000635120 STILQ15468 1287 aa9.46□□□□□ -0.9
CSMD1-218ENST00000635120 KBTBD12Q3ZCT8 623 aa9.46□□□□□ -0.9
CSMD1-218ENST00000635120 OTOAQ7RTW8 1153 aa9.46□□□□□ -0.9
CSMD1-218ENST00000635120 SCUBE1Q8IWY4 988 aa9.46□□□□□ -0.9
CSMD1-218ENST00000635120 LRRIQ3A6PVS8 624 aaPredicted RBP9.45□□□□□ -0.9
CSMD1-218ENST00000635120 DDHD2O94830 711 aa9.45□□□□□ -0.9
CSMD1-218ENST00000635120 RFX3P48380 749 aa9.45□□□□□ -0.9
CSMD1-218ENST00000635120 ZNF543Q08ER8 600 aa9.45□□□□□ -0.9
CSMD1-218ENST00000635120 ALFQ53S48 1182 aa9.45□□□□□ -0.9
CSMD1-218ENST00000635120 UNC45BQ8IWX7 931 aa9.45□□□□□ -0.9
CSMD1-218ENST00000635120 ANKRD7Q92527 254 aa9.45□□□□□ -0.9
CSMD1-218ENST00000635120 GRID1Q9ULK0 1009 aa9.45□□□□□ -0.9
CSMD1-218ENST00000635120 GTF2A1LQ9UNN4 478 aa9.45□□□□□ -0.9
CSMD1-218ENST00000635120 DOLKQ9UPQ8 538 aa9.45□□□□□ -0.9
CSMD1-218ENST00000635120 TFE3P19532 575 aaPredicted RBP9.45□□□□□ -0.9
CSMD1-218ENST00000635120 C10orf120Q5SQS8 335 aa9.45□□□□□ -0.9
CSMD1-218ENST00000635120 ATF7IP2Q5U623 682 aa9.45□□□□□ -0.9
CSMD1-218ENST00000635120 DDHD1Q8NEL9 900 aa9.45□□□□□ -0.9
CSMD1-218ENST00000635120 CRLS1Q9UJA2 301 aa9.45□□□□□ -0.9
CSMD1-218ENST00000635120 APPL1Q9UKG1 709 aa9.45□□□□□ -0.9
CSMD1-218ENST00000635120 SH3BP1Q9Y3L3 701 aa9.45□□□□□ -0.9
CSMD1-218ENST00000635120 ZCCHC18P0CG32 403 aa9.45□□□□□ -0.9
CSMD1-218ENST00000635120 C12orf60Q5U649 245 aa9.45□□□□□ -0.9
CSMD1-218ENST00000635120 PODNQ7Z5L7 613 aa9.45□□□□□ -0.9
CSMD1-218ENST00000635120 HEATR4Q86WZ0 1026 aa9.45□□□□□ -0.9
CSMD1-218ENST00000635120 UBAP1Q9NZ09 502 aa9.45□□□□□ -0.9
CSMD1-218ENST00000635120 DLG5Q8TDM6 1919 aa9.45□□□□□ -0.9
CSMD1-218ENST00000635120 PDZK1P1A8MUH7 402 aa9.45□□□□□ -0.9
CSMD1-218ENST00000635120 NCAM1P13591 858 aa9.45□□□□□ -0.9
CSMD1-218ENST00000635120 RAD9BQ6WBX8 426 aa9.45□□□□□ -0.9
CSMD1-218ENST00000635120 TPCN2Q8NHX9 752 aa9.45□□□□□ -0.9
CSMD1-218ENST00000635120 TRMT6Q9UJA5 497 aaKnown RBP9.45□□□□□ -0.9
CSMD1-218ENST00000635120 NAGPAQ9UK23 515 aa9.45□□□□□ -0.9
CSMD1-218ENST00000635120 SLC26A4O43511 780 aa9.45□□□□□ -0.9
CSMD1-218ENST00000635120 HNRNPH1P31943 449 aaKnown RBP9.45□□□□□ -0.9
CSMD1-218ENST00000635120 COILP38432 576 aaPredicted RBP9.45□□□□□ -0.9
CSMD1-218ENST00000635120 NCKAP1LP55160 1127 aa9.45□□□□□ -0.9
CSMD1-218ENST00000635120 PSMC6P62333 389 aa9.45□□□□□ -0.9
CSMD1-218ENST00000635120 SHROOM1Q2M3G4 852 aaPredicted RBP9.45□□□□□ -0.9
CSMD1-218ENST00000635120 OR8H2Q8N162 312 aa9.45□□□□□ -0.9
CSMD1-218ENST00000635120 PGBD3Q8N328 593 aa9.45□□□□□ -0.9
CSMD1-218ENST00000635120 SKIV2LQ15477 1246 aaKnown RBP9.45□□□□□ -0.9
CSMD1-218ENST00000635120 DHX30Q7L2E3 1194 aaKnown RBP eCLIP9.45□□□□□ -0.9
CSMD1-218ENST00000635120 TC2NQ8N9U0 490 aa9.45□□□□□ -0.9
CSMD1-218ENST00000635120 TERB1Q8NA31 727 aa9.45□□□□□ -0.9
CSMD1-218ENST00000635120 PHF20Q9BVI0 1012 aa9.45□□□□□ -0.9
CSMD1-218ENST00000635120 KLHL4Q9C0H6 718 aa9.45□□□□□ -0.9
CSMD1-218ENST00000635120 KRCC1Q9NPI7 259 aaPredicted RBP9.45□□□□□ -0.9
CSMD1-218ENST00000635120 CHORDC1Q9UHD1 332 aaPredicted RBP9.45□□□□□ -0.9
CSMD1-218ENST00000635120 PCDHB2Q9Y5E7 798 aa9.45□□□□□ -0.9
CSMD1-218ENST00000635120 NQO1P15559 274 aaKnown RBP9.45□□□□□ -0.9
CSMD1-218ENST00000635120 SEPT12Q8IYM1 358 aa9.45□□□□□ -0.9
CSMD1-218ENST00000635120 C1orf131Q8NDD1 294 aaKnown RBP9.45□□□□□ -0.9
CSMD1-218ENST00000635120 STKLD1Q8NE28 680 aa9.45□□□□□ -0.9
CSMD1-218ENST00000635120 BLOC1S5Q8TDH9 187 aa9.45□□□□□ -0.9
CSMD1-218ENST00000635120 PNKPQ96T60 521 aa9.45□□□□□ -0.9
CSMD1-218ENST00000635120 ARHGEF3Q9NR81 526 aa9.45□□□□□ -0.9
CSMD1-218ENST00000635120 FLT1P17948 1338 aa9.45□□□□□ -0.9
CSMD1-218ENST00000635120 F8W810 466 aa9.45□□□□□ -0.9
CSMD1-218ENST00000635120 CYP27B1O15528 508 aa9.45□□□□□ -0.9
CSMD1-218ENST00000635120 EXTL3O43909 919 aa9.45□□□□□ -0.9
CSMD1-218ENST00000635120 ZNF682O95780 498 aa9.45□□□□□ -0.9
CSMD1-218ENST00000635120 GRK2P25098 689 aa9.45□□□□□ -0.9
CSMD1-218ENST00000635120 FEN1P39748 380 aaKnown RBP9.45□□□□□ -0.9
CSMD1-218ENST00000635120 SCTRP47872 440 aa9.45□□□□□ -0.9
CSMD1-218ENST00000635120 ZNF333Q96JL9 665 aa9.45□□□□□ -0.9
CSMD1-218ENST00000635120 MAGEB18Q96M61 343 aa9.45□□□□□ -0.9
CSMD1-218ENST00000635120 PDE5AO76074 875 aa9.45□□□□□ -0.9
CSMD1-218ENST00000635120 GSTM1P09488 218 aa9.45□□□□□ -0.9
CSMD1-218ENST00000635120 PTGER2P43116 358 aa9.45□□□□□ -0.9
CSMD1-218ENST00000635120 SNX17Q15036 470 aa9.45□□□□□ -0.9
CSMD1-218ENST00000635120 RPS6KL1Q9Y6S9 549 aa9.45□□□□□ -0.9
CSMD1-218ENST00000635120 CHRM3P20309 590 aa9.44□□□□□ -0.9
CSMD1-218ENST00000635120 PCSK1P29120 753 aa9.44□□□□□ -0.9
CSMD1-218ENST00000635120 ACADSBP45954 432 aa9.44□□□□□ -0.9
CSMD1-218ENST00000635120 EXOSC10Q01780 885 aaKnown RBP9.44□□□□□ -0.9
CSMD1-218ENST00000635120 CDH18Q13634 790 aa9.44□□□□□ -0.9
CSMD1-218ENST00000635120 ITIH4Q14624 930 aa9.44□□□□□ -0.9
CSMD1-218ENST00000635120 ZCWPW2Q504Y3 356 aa9.44□□□□□ -0.9
CSMD1-218ENST00000635120 SUGP1Q8IWZ8 645 aaKnown RBP9.44□□□□□ -0.9
CSMD1-218ENST00000635120 KCTD17Q8N5Z5 321 aa9.44□□□□□ -0.9
CSMD1-218ENST00000635120 VPS33BQ9H267 617 aa9.44□□□□□ -0.9
CSMD1-218ENST00000635120 EIF4ENIF1Q9NRA8 985 aaKnown RBP9.44□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms