RNA–Protein interactions for RNA: ENST00000597209.1

CHMP2A-203, Transcript of charged multivesicular body protein 2A, humanhuman

TSL 2

Gene CHMP2A, Length 662 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2A-203ENST00000597209 STKLD1Q8NE28 680 aa19.14■□□□□ 0.65
CHMP2A-203ENST00000597209 OR6B3Q8NGW1 331 aa19.14■□□□□ 0.65
CHMP2A-203ENST00000597209 USP13Q92995 863 aaPredicted RBP19.14■□□□□ 0.65
CHMP2A-203ENST00000597209 PCED1BQ96HM7 432 aa19.14■□□□□ 0.65
CHMP2A-203ENST00000597209 LMAN1LQ9HAT1 526 aa19.14■□□□□ 0.65
CHMP2A-203ENST00000597209 PRMT8Q9NR22 394 aaPredicted RBP19.14■□□□□ 0.65
CHMP2A-203ENST00000597209 CACNA1IQ9P0X4 2223 aa19.14■□□□□ 0.65
CHMP2A-203ENST00000597209 IKBKBO14920 756 aa19.13■□□□□ 0.65
CHMP2A-203ENST00000597209 TRIM66O15016 1216 aa19.13■□□□□ 0.65
CHMP2A-203ENST00000597209 LMNAP02545 664 aaKnown RBP19.13■□□□□ 0.65
CHMP2A-203ENST00000597209 CHRNB1P11230 501 aa19.13■□□□□ 0.65
CHMP2A-203ENST00000597209 PTPN1P18031 435 aaKnown RBP19.13■□□□□ 0.65
CHMP2A-203ENST00000597209 BDNFP23560 247 aa19.13■□□□□ 0.65
CHMP2A-203ENST00000597209 GRIK1P39086 918 aa19.13■□□□□ 0.65
CHMP2A-203ENST00000597209 CYP27A1Q02318 531 aa19.13■□□□□ 0.65
CHMP2A-203ENST00000597209 ENPEPQ07075 957 aa19.13■□□□□ 0.65
CHMP2A-203ENST00000597209 BIRC3Q13489 604 aa19.13■□□□□ 0.65
CHMP2A-203ENST00000597209 GUF1Q8N442 669 aaKnown RBP19.13■□□□□ 0.65
CHMP2A-203ENST00000597209 NELL1Q92832 810 aa19.13■□□□□ 0.65
CHMP2A-203ENST00000597209 CCDC34Q96HJ3 373 aa19.13■□□□□ 0.65
CHMP2A-203ENST00000597209 ZFYVE19Q96K21 471 aa19.13■□□□□ 0.65
CHMP2A-203ENST00000597209 C8orf48Q96LL4 319 aa19.13■□□□□ 0.65
CHMP2A-203ENST00000597209 FAM83CQ9BQN1 747 aa19.13■□□□□ 0.65
CHMP2A-203ENST00000597209 SMG9Q9H0W8 520 aaKnown RBP19.13■□□□□ 0.65
CHMP2A-203ENST00000597209 GTSE1Q9NYZ3 720 aa19.13■□□□□ 0.65
CHMP2A-203ENST00000597209 EHD2Q9NZN4 543 aa19.13■□□□□ 0.65
CHMP2A-203ENST00000597209 NXF1Q9UBU9 619 aaKnown RBP19.13■□□□□ 0.65
CHMP2A-203ENST00000597209 FRMD4BQ9Y2L6 1034 aa19.13■□□□□ 0.65
CHMP2A-203ENST00000597209 R4GN57 208 aa19.13■□□□□ 0.65
CHMP2A-203ENST00000597209 PTPRDP23468 1912 aa19.13■□□□□ 0.65
CHMP2A-203ENST00000597209 USP34Q70CQ2 3546 aa19.13■□□□□ 0.65
CHMP2A-203ENST00000597209 F5P12259 2224 aa19.12■□□□□ 0.65
CHMP2A-203ENST00000597209 GREB1Q4ZG55 1949 aa19.12■□□□□ 0.65
CHMP2A-203ENST00000597209 A8MXQ7 604 aa19.12■□□□□ 0.65
CHMP2A-203ENST00000597209 SPECC1L-ADORA2AF8WAN1 911 aa19.12■□□□□ 0.65
CHMP2A-203ENST00000597209 VNN1O95497 513 aa19.12■□□□□ 0.65
CHMP2A-203ENST00000597209 PFKLP17858 780 aa19.12■□□□□ 0.65
CHMP2A-203ENST00000597209 ANXA13P27216 316 aa19.12■□□□□ 0.65
CHMP2A-203ENST00000597209 CTHP32929 405 aa19.12■□□□□ 0.65
CHMP2A-203ENST00000597209 DLG4P78352 724 aa19.12■□□□□ 0.65
CHMP2A-203ENST00000597209 NUCB2P80303 420 aa19.12■□□□□ 0.65
CHMP2A-203ENST00000597209 CSTF1Q05048 431 aaKnown RBP19.12■□□□□ 0.65
CHMP2A-203ENST00000597209 MTAPQ13126 283 aa19.12■□□□□ 0.65
CHMP2A-203ENST00000597209 NCOA4Q13772 614 aa19.12■□□□□ 0.65
CHMP2A-203ENST00000597209 LRRC32Q14392 662 aa19.12■□□□□ 0.65
CHMP2A-203ENST00000597209 ZNF699Q32M78 642 aa19.12■□□□□ 0.65
CHMP2A-203ENST00000597209 ZACNQ401N2 412 aa19.12■□□□□ 0.65
CHMP2A-203ENST00000597209 ZNF667Q5HYK9 610 aa19.12■□□□□ 0.65
CHMP2A-203ENST00000597209 MDH1BQ5I0G3 518 aa19.12■□□□□ 0.65
CHMP2A-203ENST00000597209 TAF4BQ92750 862 aa19.12■□□□□ 0.65
CHMP2A-203ENST00000597209 TTLL2Q9BWV7 592 aa19.12■□□□□ 0.65
CHMP2A-203ENST00000597209 FAM126AQ9BYI3 521 aaPredicted RBP19.12■□□□□ 0.65
CHMP2A-203ENST00000597209 GKN1Q9NS71 199 aa19.12■□□□□ 0.65
CHMP2A-203ENST00000597209 CCL26Q9Y258 94 aa19.12■□□□□ 0.65
CHMP2A-203ENST00000597209 USP17L7P0C7H9 530 aa19.11■□□□□ 0.65
CHMP2A-203ENST00000597209 TCF3P15923 654 aa19.11■□□□□ 0.65
CHMP2A-203ENST00000597209 SOX9P48436 509 aa19.11■□□□□ 0.65
CHMP2A-203ENST00000597209 PPP3CCP48454 512 aa19.11■□□□□ 0.65
CHMP2A-203ENST00000597209 MCCD1P59942 119 aaPredicted RBP19.11■□□□□ 0.65
CHMP2A-203ENST00000597209 NOP14P78316 857 aaKnown RBP19.11■□□□□ 0.65
CHMP2A-203ENST00000597209 FAM160A1Q05DH4 1040 aa19.11■□□□□ 0.65
CHMP2A-203ENST00000597209 SGSM1Q2NKQ1 1148 aa19.11■□□□□ 0.65
CHMP2A-203ENST00000597209 ITPRIPL2Q3MIP1 535 aa19.11■□□□□ 0.65
CHMP2A-203ENST00000597209 DGKKQ5KSL6 1271 aa19.11■□□□□ 0.65
CHMP2A-203ENST00000597209 DENND5BQ6ZUT9 1274 aa19.11■□□□□ 0.65
CHMP2A-203ENST00000597209 ZBTB44Q8NCP5 570 aa19.11■□□□□ 0.65
CHMP2A-203ENST00000597209 B3GALNT2Q8NCR0 500 aa19.11■□□□□ 0.65
CHMP2A-203ENST00000597209 ELOVL4Q9GZR5 314 aa19.11■□□□□ 0.65
CHMP2A-203ENST00000597209 GDPD2Q9HCC8 539 aa19.11■□□□□ 0.65
CHMP2A-203ENST00000597209 GCNT4Q9P109 453 aa19.11■□□□□ 0.65
CHMP2A-203ENST00000597209 PCDHGA2Q9Y5H1 932 aa19.11■□□□□ 0.65
CHMP2A-203ENST00000597209 MYO15AQ9UKN7 3530 aa19.11■□□□□ 0.65
CHMP2A-203ENST00000597209 TRAV19A0A0A6YYK7 116 aa19.1■□□□□ 0.65
CHMP2A-203ENST00000597209 P4HA1P13674 534 aa19.1■□□□□ 0.65
CHMP2A-203ENST00000597209 RPL13P26373 211 aaKnown RBP19.1■□□□□ 0.65
CHMP2A-203ENST00000597209 PDE6CP51160 858 aa19.1■□□□□ 0.65
CHMP2A-203ENST00000597209 CCR3P51677 355 aa19.1■□□□□ 0.65
CHMP2A-203ENST00000597209 TNK2Q07912 1038 aa19.1■□□□□ 0.65
CHMP2A-203ENST00000597209 RUNX3Q13761 415 aa19.1■□□□□ 0.65
CHMP2A-203ENST00000597209 CEP135Q66GS9 1140 aa19.1■□□□□ 0.65
CHMP2A-203ENST00000597209 TXNDC11Q6PKC3 985 aa19.1■□□□□ 0.65
CHMP2A-203ENST00000597209 SV2AQ7L0J3 742 aa19.1■□□□□ 0.65
CHMP2A-203ENST00000597209 ADSSL1Q8N142 457 aa19.1■□□□□ 0.65
CHMP2A-203ENST00000597209 SYNPOQ8N3V7 929 aa19.1■□□□□ 0.65
CHMP2A-203ENST00000597209 B3GNT5Q9BYG0 378 aa19.1■□□□□ 0.65
CHMP2A-203ENST00000597209 DPEP3Q9H4B8 488 aa19.1■□□□□ 0.65
CHMP2A-203ENST00000597209 SMYD3Q9H7B4 428 aa19.1■□□□□ 0.65
CHMP2A-203ENST00000597209 ZSCAN32Q9NX65 697 aa19.1■□□□□ 0.65
CHMP2A-203ENST00000597209 F8VP50 259 aa19.09■□□□□ 0.65
CHMP2A-203ENST00000597209 KINO60870 393 aaKnown RBP19.09■□□□□ 0.65
CHMP2A-203ENST00000597209 TDGF1P13385 188 aa19.09■□□□□ 0.65
CHMP2A-203ENST00000597209 NR2F2P24468 414 aa19.09■□□□□ 0.65
CHMP2A-203ENST00000597209 VAMP7P51809 220 aa19.09■□□□□ 0.65
CHMP2A-203ENST00000597209 CDH8P55286 799 aa19.09■□□□□ 0.65
CHMP2A-203ENST00000597209 PPP2R5DQ14738 602 aa19.09■□□□□ 0.65
CHMP2A-203ENST00000597209 PDGFRLQ15198 375 aa19.09■□□□□ 0.65
CHMP2A-203ENST00000597209 C1orf220Q5T0J3 134 aa19.09■□□□□ 0.65
CHMP2A-203ENST00000597209 CC2D1AQ6P1N0 951 aaPredicted RBP19.09■□□□□ 0.65
CHMP2A-203ENST00000597209 INTS8Q75QN2 995 aaKnown RBP19.09■□□□□ 0.65
CHMP2A-203ENST00000597209 SPEM1Q8N4L4 309 aa19.09■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 163.1 ms