RNA–Protein interactions for RNA: ENST00000596938.1

CCDC9-203, Transcript of coiled-coil domain containing 9, humanhuman

TSL 3

Gene CCDC9, Length 457 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC9-203ENST00000596938 CACNA1HO95180 2353 aa11.23□□□□□ -0.61
CCDC9-203ENST00000596938 A8MXQ7 604 aa11.22□□□□□ -0.61
CCDC9-203ENST00000596938 LRRN2O75325 713 aa11.22□□□□□ -0.61
CCDC9-203ENST00000596938 SMC2O95347 1197 aa11.22□□□□□ -0.61
CCDC9-203ENST00000596938 PRAMEF12O95522 483 aa11.22□□□□□ -0.61
CCDC9-203ENST00000596938 P4HA1P13674 534 aa11.22□□□□□ -0.61
CCDC9-203ENST00000596938 GTF2H1P32780 548 aa11.22□□□□□ -0.61
CCDC9-203ENST00000596938 PSMC2P35998 433 aaKnown RBP11.22□□□□□ -0.61
CCDC9-203ENST00000596938 AVPR1AP37288 418 aa11.22□□□□□ -0.61
CCDC9-203ENST00000596938 GRIK1P39086 918 aa11.22□□□□□ -0.61
CCDC9-203ENST00000596938 VAMP7P51809 220 aa11.22□□□□□ -0.61
CCDC9-203ENST00000596938 PLCB2Q00722 1185 aa11.22□□□□□ -0.61
CCDC9-203ENST00000596938 CYP27A1Q02318 531 aa11.22□□□□□ -0.61
CCDC9-203ENST00000596938 PNOCQ13519 176 aa11.22□□□□□ -0.61
CCDC9-203ENST00000596938 ZNF268Q14587 947 aaPredicted RBP11.22□□□□□ -0.61
CCDC9-203ENST00000596938 ZNF658Q5TYW1 1059 aaPredicted RBP11.22□□□□□ -0.61
CCDC9-203ENST00000596938 TXNDC8Q6A555 127 aa11.22□□□□□ -0.61
CCDC9-203ENST00000596938 GPIHBP1Q8IV16 184 aa11.22□□□□□ -0.61
CCDC9-203ENST00000596938 MAB21L3Q8N8X9 362 aa11.22□□□□□ -0.61
CCDC9-203ENST00000596938 B3GALNT2Q8NCR0 500 aa11.22□□□□□ -0.61
CCDC9-203ENST00000596938 CSGALNACT1Q8TDX6 532 aa11.22□□□□□ -0.61
CCDC9-203ENST00000596938 FAM3CQ92520 227 aa11.22□□□□□ -0.61
CCDC9-203ENST00000596938 TTLL2Q9BWV7 592 aa11.22□□□□□ -0.61
CCDC9-203ENST00000596938 KIF9Q9HAQ2 790 aa11.22□□□□□ -0.61
CCDC9-203ENST00000596938 TDP1Q9NUW8 608 aa11.22□□□□□ -0.61
CCDC9-203ENST00000596938 EHD2Q9NZN4 543 aa11.22□□□□□ -0.61
CCDC9-203ENST00000596938 HOOK1Q9UJC3 728 aaKnown RBP11.22□□□□□ -0.61
CCDC9-203ENST00000596938 PIAS3Q9Y6X2 628 aa11.22□□□□□ -0.61
CCDC9-203ENST00000596938 KMT2EQ8IZD2 1858 aa11.21□□□□□ -0.61
CCDC9-203ENST00000596938 TRIM66O15016 1216 aa11.21□□□□□ -0.61
CCDC9-203ENST00000596938 ASS1P00966 412 aaKnown RBP11.21□□□□□ -0.61
CCDC9-203ENST00000596938 KRT13P13646 458 aa11.21□□□□□ -0.61
CCDC9-203ENST00000596938 PFKLP17858 780 aa11.21□□□□□ -0.61
CCDC9-203ENST00000596938 TARSP26639 723 aaKnown RBP11.21□□□□□ -0.61
CCDC9-203ENST00000596938 ANXA13P27216 316 aa11.21□□□□□ -0.61
CCDC9-203ENST00000596938 PPP3CCP48454 512 aa11.21□□□□□ -0.61
CCDC9-203ENST00000596938 CDH8P55286 799 aa11.21□□□□□ -0.61
CCDC9-203ENST00000596938 NOP14P78316 857 aaKnown RBP11.21□□□□□ -0.61
CCDC9-203ENST00000596938 ZNF528Q3MIS6 628 aa11.21□□□□□ -0.61
CCDC9-203ENST00000596938 MDH1BQ5I0G3 518 aa11.21□□□□□ -0.61
CCDC9-203ENST00000596938 DENND5BQ6ZUT9 1274 aa11.21□□□□□ -0.61
CCDC9-203ENST00000596938 RALGPS2Q86X27 583 aaPredicted RBP11.21□□□□□ -0.61
CCDC9-203ENST00000596938 FAM186BQ8IYM0 893 aa11.21□□□□□ -0.61
CCDC9-203ENST00000596938 MAML2Q8IZL2 1156 aaPredicted RBP11.21□□□□□ -0.61
CCDC9-203ENST00000596938 CRYBG2Q8N1P7 616 aa11.21□□□□□ -0.61
CCDC9-203ENST00000596938 STKLD1Q8NE28 680 aa11.21□□□□□ -0.61
CCDC9-203ENST00000596938 USP13Q92995 863 aaPredicted RBP11.21□□□□□ -0.61
CCDC9-203ENST00000596938 TNIP3Q96KP6 325 aa11.21□□□□□ -0.61
CCDC9-203ENST00000596938 FAM83CQ9BQN1 747 aa11.21□□□□□ -0.61
CCDC9-203ENST00000596938 B3GNT5Q9BYG0 378 aa11.21□□□□□ -0.61
CCDC9-203ENST00000596938 ELOVL4Q9GZR5 314 aa11.21□□□□□ -0.61
CCDC9-203ENST00000596938 SEMA4AQ9H3S1 761 aa11.21□□□□□ -0.61
CCDC9-203ENST00000596938 DPEP3Q9H4B8 488 aa11.21□□□□□ -0.61
CCDC9-203ENST00000596938 FBXO4Q9UKT5 387 aa11.21□□□□□ -0.61
CCDC9-203ENST00000596938 PCDHA5Q9Y5H7 936 aa11.21□□□□□ -0.61
CCDC9-203ENST00000596938 ZFHX2Q9C0A1 2572 aaPredicted RBP11.2□□□□□ -0.62
CCDC9-203ENST00000596938 F8VP50 259 aa11.2□□□□□ -0.62
CCDC9-203ENST00000596938 CETN3O15182 167 aa11.2□□□□□ -0.62
CCDC9-203ENST00000596938 TADA3O75528 432 aa11.2□□□□□ -0.62
CCDC9-203ENST00000596938 HLA-DRAP01903 254 aa11.2□□□□□ -0.62
CCDC9-203ENST00000596938 SP9P0CG40 484 aa11.2□□□□□ -0.62
CCDC9-203ENST00000596938 PRCPP42785 496 aa11.2□□□□□ -0.62
CCDC9-203ENST00000596938 KPNA1P52294 538 aaPredicted RBP11.2□□□□□ -0.62
CCDC9-203ENST00000596938 PPP3CAQ08209 521 aa11.2□□□□□ -0.62
CCDC9-203ENST00000596938 UNC93AQ86WB7 457 aa11.2□□□□□ -0.62
CCDC9-203ENST00000596938 SMARCE1Q969G3 411 aa11.2□□□□□ -0.62
CCDC9-203ENST00000596938 FAXDC2Q96IV6 333 aa11.2□□□□□ -0.62
CCDC9-203ENST00000596938 IER2Q9BTL4 223 aa11.2□□□□□ -0.62
CCDC9-203ENST00000596938 SMG9Q9H0W8 520 aaKnown RBP11.2□□□□□ -0.62
CCDC9-203ENST00000596938 SDCBP2Q9H190 292 aa11.2□□□□□ -0.62
CCDC9-203ENST00000596938 SMYD3Q9H7B4 428 aa11.2□□□□□ -0.62
CCDC9-203ENST00000596938 LMAN1LQ9HAT1 526 aa11.2□□□□□ -0.62
CCDC9-203ENST00000596938 CYP3A43Q9HB55 503 aa11.2□□□□□ -0.62
CCDC9-203ENST00000596938 GKN1Q9NS71 199 aa11.2□□□□□ -0.62
CCDC9-203ENST00000596938 SPATA6Q9NWH7 488 aaPredicted RBP11.2□□□□□ -0.62
CCDC9-203ENST00000596938 GCNT4Q9P109 453 aa11.2□□□□□ -0.62
CCDC9-203ENST00000596938 CIZ1Q9ULV3 898 aaPredicted RBP11.2□□□□□ -0.62
CCDC9-203ENST00000596938 CCL26Q9Y258 94 aa11.2□□□□□ -0.62
CCDC9-203ENST00000596938 TSC2P49815 1807 aa11.2□□□□□ -0.62
CCDC9-203ENST00000596938 ATP8B3O60423 1300 aa11.19□□□□□ -0.62
CCDC9-203ENST00000596938 TRAV19A0A0A6YYK7 116 aa11.19□□□□□ -0.62
CCDC9-203ENST00000596938 ZNF840PA6NDX5 716 aa11.19□□□□□ -0.62
CCDC9-203ENST00000596938 LAMTOR5O43504 91 aa11.19□□□□□ -0.62
CCDC9-203ENST00000596938 GFRA3O60609 400 aa11.19□□□□□ -0.62
CCDC9-203ENST00000596938 USP17L7P0C7H9 530 aa11.19□□□□□ -0.62
CCDC9-203ENST00000596938 CHRNB1P11230 501 aa11.19□□□□□ -0.62
CCDC9-203ENST00000596938 TCF3P15923 654 aa11.19□□□□□ -0.62
CCDC9-203ENST00000596938 HDCP19113 662 aa11.19□□□□□ -0.62
CCDC9-203ENST00000596938 CCNE1P24864 410 aa11.19□□□□□ -0.62
CCDC9-203ENST00000596938 PIK3CAP42336 1068 aa11.19□□□□□ -0.62
CCDC9-203ENST00000596938 ASPAP45381 313 aa11.19□□□□□ -0.62
CCDC9-203ENST00000596938 GCLMP48507 274 aa11.19□□□□□ -0.62
CCDC9-203ENST00000596938 PDE6CP51160 858 aa11.19□□□□□ -0.62
CCDC9-203ENST00000596938 USP46P62068 366 aa11.19□□□□□ -0.62
CCDC9-203ENST00000596938 ITPRIPL2Q3MIP1 535 aa11.19□□□□□ -0.62
CCDC9-203ENST00000596938 PAQR9Q6ZVX9 377 aa11.19□□□□□ -0.62
CCDC9-203ENST00000596938 FRMD5Q7Z6J6 570 aa11.19□□□□□ -0.62
CCDC9-203ENST00000596938 ZC3H3Q8IXZ2 948 aaKnown RBP11.19□□□□□ -0.62
CCDC9-203ENST00000596938 SMYD4Q8IYR2 804 aaPredicted RBP11.19□□□□□ -0.62
CCDC9-203ENST00000596938 ADSSL1Q8N142 457 aa11.19□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 165.9 ms