RNA–Protein interactions for RNA: ENST00000591126.5

SMAD4-212, Transcript of SMAD family member 4, humanhuman

TSL 1 (best)

Gene SMAD4, Length 4,970 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-212ENST00000591126 IFRD1O00458 451 aaPredicted RBP6.58□□□□□ -1.36
SMAD4-212ENST00000591126 FGF10O15520 208 aaPredicted RBP6.58□□□□□ -1.36
SMAD4-212ENST00000591126 GLI1P08151 1106 aa6.58□□□□□ -1.36
SMAD4-212ENST00000591126 PYGMP11217 842 aa6.58□□□□□ -1.36
SMAD4-212ENST00000591126 GJA8P48165 433 aa6.58□□□□□ -1.36
SMAD4-212ENST00000591126 APBA1Q02410 837 aa6.58□□□□□ -1.36
SMAD4-212ENST00000591126 SLC20A2Q08357 652 aa6.58□□□□□ -1.36
SMAD4-212ENST00000591126 ADCY1Q08828 1119 aa6.58□□□□□ -1.36
SMAD4-212ENST00000591126 USP39Q53GS9 565 aaKnown RBP6.58□□□□□ -1.36
SMAD4-212ENST00000591126 NAPEPLDQ6IQ20 393 aa6.58□□□□□ -1.36
SMAD4-212ENST00000591126 CCDC25Q86WR0 208 aa6.58□□□□□ -1.36
SMAD4-212ENST00000591126 MFN1Q8IWA4 741 aa6.58□□□□□ -1.36
SMAD4-212ENST00000591126 CTAGE3PQ8IX95 158 aa6.58□□□□□ -1.36
SMAD4-212ENST00000591126 NUP93Q8N1F7 819 aa6.58□□□□□ -1.36
SMAD4-212ENST00000591126 CYFIP2Q96F07 1278 aa6.58□□□□□ -1.36
SMAD4-212ENST00000591126 BORCS6Q96GS4 357 aa6.58□□□□□ -1.36
SMAD4-212ENST00000591126 TMEM176AQ96HP8 235 aa6.58□□□□□ -1.36
SMAD4-212ENST00000591126 GAD1Q99259 594 aa6.58□□□□□ -1.36
SMAD4-212ENST00000591126 DHX35Q9H5Z1 703 aaKnown RBP6.58□□□□□ -1.36
SMAD4-212ENST00000591126 KLK14Q9P0G3 267 aa6.58□□□□□ -1.36
SMAD4-212ENST00000591126 KRIT1O00522 736 aa6.57□□□□□ -1.36
SMAD4-212ENST00000591126 BUB1O43683 1085 aa6.57□□□□□ -1.36
SMAD4-212ENST00000591126 RECQL4O94761 1208 aa6.57□□□□□ -1.36
SMAD4-212ENST00000591126 INHBAP08476 426 aa6.57□□□□□ -1.36
SMAD4-212ENST00000591126 NMT1P30419 496 aaKnown RBP6.57□□□□□ -1.36
SMAD4-212ENST00000591126 ANXA11P50995 505 aaKnown RBP6.57□□□□□ -1.36
SMAD4-212ENST00000591126 FAM193AP78312 1265 aa6.57□□□□□ -1.36
SMAD4-212ENST00000591126 FBXO43Q4G163 708 aa6.57□□□□□ -1.36
SMAD4-212ENST00000591126 ALKBH5Q6P6C2 394 aaKnown RBP6.57□□□□□ -1.36
SMAD4-212ENST00000591126 CCNJLQ8IV13 435 aa6.57□□□□□ -1.36
SMAD4-212ENST00000591126 MAP4K3Q8IVH8 894 aa6.57□□□□□ -1.36
SMAD4-212ENST00000591126 BEND7Q8N7W2 519 aaPredicted RBP6.57□□□□□ -1.36
SMAD4-212ENST00000591126 SLC22A17Q8WUG5 538 aa6.57□□□□□ -1.36
SMAD4-212ENST00000591126 EPSTI1Q96J88 318 aa6.57□□□□□ -1.36
SMAD4-212ENST00000591126 SCYL1Q96KG9 808 aa6.57□□□□□ -1.36
SMAD4-212ENST00000591126 FOXP3Q9BZS1 431 aa6.57□□□□□ -1.36
SMAD4-212ENST00000591126 RNPEPQ9H4A4 650 aa6.57□□□□□ -1.36
SMAD4-212ENST00000591126 PPCSQ9HAB8 311 aa6.57□□□□□ -1.36
SMAD4-212ENST00000591126 KRT82Q9NSB4 513 aa6.57□□□□□ -1.36
SMAD4-212ENST00000591126 CD207Q9UJ71 328 aa6.57□□□□□ -1.36
SMAD4-212ENST00000591126 EPN1Q9Y6I3 576 aaPredicted RBP6.57□□□□□ -1.36
SMAD4-212ENST00000591126 C4AP0C0L4 1744 aa6.57□□□□□ -1.36
SMAD4-212ENST00000591126 INPP4BO15327 924 aa6.57□□□□□ -1.36
SMAD4-212ENST00000591126 LAMTOR5O43504 91 aa6.57□□□□□ -1.36
SMAD4-212ENST00000591126 DNAJC6O75061 913 aa6.57□□□□□ -1.36
SMAD4-212ENST00000591126 MTA2O94776 668 aa6.57□□□□□ -1.36
SMAD4-212ENST00000591126 ACO1P21399 889 aaKnown RBP6.57□□□□□ -1.36
SMAD4-212ENST00000591126 AKT1P31749 480 aa6.57□□□□□ -1.36
SMAD4-212ENST00000591126 NUDT1P36639 197 aa6.57□□□□□ -1.36
SMAD4-212ENST00000591126 NPY2RP49146 381 aa6.57□□□□□ -1.36
SMAD4-212ENST00000591126 UAP1Q16222 522 aaPredicted RBP6.57□□□□□ -1.36
SMAD4-212ENST00000591126 ZSCAN1Q8NBB4 408 aa6.57□□□□□ -1.36
SMAD4-212ENST00000591126 KREMEN2Q8NCW0 462 aa6.57□□□□□ -1.36
SMAD4-212ENST00000591126 SYN2Q92777 582 aaPredicted RBP6.57□□□□□ -1.36
SMAD4-212ENST00000591126 HAPLN3Q96S86 360 aa6.57□□□□□ -1.36
SMAD4-212ENST00000591126 ZBTB18Q99592 522 aa6.57□□□□□ -1.36
SMAD4-212ENST00000591126 SLTMQ9NWH9 1034 aaKnown RBP eCLIP6.57□□□□□ -1.36
SMAD4-212ENST00000591126 AFF4Q9UHB7 1163 aaKnown RBP6.57□□□□□ -1.36
SMAD4-212ENST00000591126 PRR5-ARHGAP8B1AHC4 643 aa6.57□□□□□ -1.36
SMAD4-212ENST00000591126 KIF3CO14782 793 aa6.57□□□□□ -1.36
SMAD4-212ENST00000591126 SLMAPQ14BN4 828 aa6.57□□□□□ -1.36
SMAD4-212ENST00000591126 TRADDQ15628 312 aa6.57□□□□□ -1.36
SMAD4-212ENST00000591126 HSP90AA4PQ58FG1 418 aa6.57□□□□□ -1.36
SMAD4-212ENST00000591126 DGKKQ5KSL6 1271 aa6.57□□□□□ -1.36
SMAD4-212ENST00000591126 TMEM164Q5U3C3 297 aa6.57□□□□□ -1.36
SMAD4-212ENST00000591126 CENPUQ71F23 418 aa6.57□□□□□ -1.36
SMAD4-212ENST00000591126 HS6ST3Q8IZP7 471 aa6.57□□□□□ -1.36
SMAD4-212ENST00000591126 FAM9CQ8IZT9 166 aa6.57□□□□□ -1.36
SMAD4-212ENST00000591126 CARNMT1Q8N4J0 409 aa6.57□□□□□ -1.36
SMAD4-212ENST00000591126 CXorf40AQ8TE69 158 aa6.57□□□□□ -1.36
SMAD4-212ENST00000591126 KCTD13Q8WZ19 329 aa6.57□□□□□ -1.36
SMAD4-212ENST00000591126 TRMT61BQ9BVS5 477 aaKnown RBP6.57□□□□□ -1.36
SMAD4-212ENST00000591126 GPR63Q9BZJ6 419 aa6.57□□□□□ -1.36
SMAD4-212ENST00000591126 CBX8Q9HC52 389 aa6.57□□□□□ -1.36
SMAD4-212ENST00000591126 CYLDQ9NQC7 956 aa6.57□□□□□ -1.36
SMAD4-212ENST00000591126 IL17RBQ9NRM6 502 aa6.57□□□□□ -1.36
SMAD4-212ENST00000591126 KLHL11Q9NVR0 708 aa6.57□□□□□ -1.36
SMAD4-212ENST00000591126 PKD2L2Q9NZM6 624 aa6.57□□□□□ -1.36
SMAD4-212ENST00000591126 KIAA1522Q9P206 1035 aaPredicted RBP6.57□□□□□ -1.36
SMAD4-212ENST00000591126 INTUQ9ULD6 942 aa6.57□□□□□ -1.36
SMAD4-212ENST00000591126 TMX2-CTNND1H3BSU7 103 aa6.57□□□□□ -1.36
SMAD4-212ENST00000591126 O00370 1275 aa6.57□□□□□ -1.36
SMAD4-212ENST00000591126 CRTAMO95727 393 aa6.57□□□□□ -1.36
SMAD4-212ENST00000591126 ITGALP20701 1170 aa6.57□□□□□ -1.36
SMAD4-212ENST00000591126 CDH8P55286 799 aa6.57□□□□□ -1.36
SMAD4-212ENST00000591126 ANTXR2P58335 489 aa6.57□□□□□ -1.36
SMAD4-212ENST00000591126 STX1BP61266 288 aa6.57□□□□□ -1.36
SMAD4-212ENST00000591126 ERVK-21P61565 698 aa6.57□□□□□ -1.36
SMAD4-212ENST00000591126 RHOAP61586 193 aa6.57□□□□□ -1.36
SMAD4-212ENST00000591126 ELP6Q0PNE2 266 aa6.57□□□□□ -1.36
SMAD4-212ENST00000591126 PTK6Q13882 451 aa6.57□□□□□ -1.36
SMAD4-212ENST00000591126 DMC1Q14565 340 aa6.57□□□□□ -1.36
SMAD4-212ENST00000591126 TMTC4Q5T4D3 741 aa6.57□□□□□ -1.36
SMAD4-212ENST00000591126 HHATQ5VTY9 493 aa6.57□□□□□ -1.36
SMAD4-212ENST00000591126 FUT10Q6P4F1 479 aa6.57□□□□□ -1.36
SMAD4-212ENST00000591126 EFL1Q7Z2Z2 1120 aaKnown RBP6.57□□□□□ -1.36
SMAD4-212ENST00000591126 ARMC2Q8NEN0 867 aa6.57□□□□□ -1.36
SMAD4-212ENST00000591126 DENND1AQ8TEH3 1009 aa6.57□□□□□ -1.36
SMAD4-212ENST00000591126 IRGQQ8WZA9 623 aa6.57□□□□□ -1.36
SMAD4-212ENST00000591126 ABCG4Q9H172 646 aa6.57□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 53.9 ms