RNA–Protein interactions for RNA: ENST00000590339.5

VPS25-205, Transcript of vacuolar protein sorting 25 homolog, humanhuman

TSL 2

Gene VPS25, Length 668 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS25-205ENST00000590339 TMEM110-MUSTN1A8MSY1 372 aa9.95□□□□□ -0.82
VPS25-205ENST00000590339 O00370 1275 aa9.95□□□□□ -0.82
VPS25-205ENST00000590339 PIRO00625 290 aa9.95□□□□□ -0.82
VPS25-205ENST00000590339 LINC00271P0C7V0 271 aa9.95□□□□□ -0.82
VPS25-205ENST00000590339 VDRP11473 427 aa9.95□□□□□ -0.82
VPS25-205ENST00000590339 KCNA5P22460 613 aa9.95□□□□□ -0.82
VPS25-205ENST00000590339 SLC1A1P43005 524 aa9.95□□□□□ -0.82
VPS25-205ENST00000590339 CDH8P55286 799 aa9.95□□□□□ -0.82
VPS25-205ENST00000590339 MYO1EQ12965 1108 aa9.95□□□□□ -0.82
VPS25-205ENST00000590339 MAMLD1Q13495 774 aa9.95□□□□□ -0.82
VPS25-205ENST00000590339 DSC3Q14574 896 aa9.95□□□□□ -0.82
VPS25-205ENST00000590339 ZNF394Q53GI3 561 aa9.95□□□□□ -0.82
VPS25-205ENST00000590339 C9orf57Q5W0N0 161 aa9.95□□□□□ -0.82
VPS25-205ENST00000590339 LIMS2Q7Z4I7 341 aa9.95□□□□□ -0.82
VPS25-205ENST00000590339 KLHL23Q8NBE8 558 aa9.95□□□□□ -0.82
VPS25-205ENST00000590339 CLP1Q92989 425 aaKnown RBP9.95□□□□□ -0.82
VPS25-205ENST00000590339 C18orf25Q96B23 403 aaPredicted RBP9.95□□□□□ -0.82
VPS25-205ENST00000590339 TMEM176AQ96HP8 235 aa9.95□□□□□ -0.82
VPS25-205ENST00000590339 UHRF1Q96T88 793 aaPredicted RBP9.95□□□□□ -0.82
VPS25-205ENST00000590339 C11orf84Q9BUA3 381 aaPredicted RBP9.95□□□□□ -0.82
VPS25-205ENST00000590339 FUT8Q9BYC5 575 aa9.95□□□□□ -0.82
VPS25-205ENST00000590339 TRIM7Q9C029 511 aa9.95□□□□□ -0.82
VPS25-205ENST00000590339 TRIM6Q9C030 488 aaPredicted RBP9.95□□□□□ -0.82
VPS25-205ENST00000590339 SLITRK6Q9H5Y7 841 aa9.95□□□□□ -0.82
VPS25-205ENST00000590339 IGFLR1Q9H665 355 aa9.95□□□□□ -0.82
VPS25-205ENST00000590339 RC3H2Q9HBD1 1191 aaKnown RBP9.95□□□□□ -0.82
VPS25-205ENST00000590339 MRPL47Q9HD33 250 aaKnown RBP9.95□□□□□ -0.82
VPS25-205ENST00000590339 GDF3Q9NR23 364 aa9.95□□□□□ -0.82
VPS25-205ENST00000590339 HCSTQ9UBK5 93 aa9.95□□□□□ -0.82
VPS25-205ENST00000590339 CYTH4Q9UIA0 394 aa9.95□□□□□ -0.82
VPS25-205ENST00000590339 LCMT1Q9UIC8 334 aa9.95□□□□□ -0.82
VPS25-205ENST00000590339 WDR3Q9UNX4 943 aaKnown RBP eCLIP9.95□□□□□ -0.82
VPS25-205ENST00000590339 RWDD3Q9Y3V2 267 aa9.95□□□□□ -0.82
VPS25-205ENST00000590339 SMIM28A0A1B0GU29 152 aa9.94□□□□□ -0.82
VPS25-205ENST00000590339 C5orf67F2Z3F1 127 aa9.94□□□□□ -0.82
VPS25-205ENST00000590339 PTGESO14684 152 aa9.94□□□□□ -0.82
VPS25-205ENST00000590339 MAP2K7O14733 419 aa9.94□□□□□ -0.82
VPS25-205ENST00000590339 RAD51CO43502 376 aa9.94□□□□□ -0.82
VPS25-205ENST00000590339 PSTPIP1O43586 416 aa9.94□□□□□ -0.82
VPS25-205ENST00000590339 XPOTO43592 962 aaKnown RBP9.94□□□□□ -0.82
VPS25-205ENST00000590339 SPOPO43791 374 aa9.94□□□□□ -0.82
VPS25-205ENST00000590339 SASH3O75995 380 aa9.94□□□□□ -0.82
VPS25-205ENST00000590339 FGGP02679 453 aa9.94□□□□□ -0.82
VPS25-205ENST00000590339 MYBL2P10244 700 aa9.94□□□□□ -0.82
VPS25-205ENST00000590339 CD19P15391 556 aa9.94□□□□□ -0.82
VPS25-205ENST00000590339 LRPAP1P30533 357 aa9.94□□□□□ -0.82
VPS25-205ENST00000590339 SSTR3P32745 418 aaPredicted RBP9.94□□□□□ -0.82
VPS25-205ENST00000590339 FAM189BP81408 668 aa9.94□□□□□ -0.82
VPS25-205ENST00000590339 ZNF252P-AS1Q0IIN9 211 aa9.94□□□□□ -0.82
VPS25-205ENST00000590339 PTPN20Q4JDL3 420 aa9.94□□□□□ -0.82
VPS25-205ENST00000590339 C2CD6Q53TS8 623 aa9.94□□□□□ -0.82
VPS25-205ENST00000590339 GLRA4Q5JXX5 417 aa9.94□□□□□ -0.82
VPS25-205ENST00000590339 NIPA2Q8N8Q9 360 aa9.94□□□□□ -0.82
VPS25-205ENST00000590339 C3orf20Q8ND61 904 aa9.94□□□□□ -0.82
VPS25-205ENST00000590339 FEZF2Q8TBJ5 459 aa9.94□□□□□ -0.82
VPS25-205ENST00000590339 MICAL1Q8TDZ2 1067 aa9.94□□□□□ -0.82
VPS25-205ENST00000590339 AENQ8WTP8 325 aaKnown RBP9.94□□□□□ -0.82
VPS25-205ENST00000590339 HDAC7Q8WUI4 952 aa9.94□□□□□ -0.82
VPS25-205ENST00000590339 ZNF560Q96MR9 790 aa9.94□□□□□ -0.82
VPS25-205ENST00000590339 PPP1R10Q96QC0 940 aaKnown RBP9.94□□□□□ -0.82
VPS25-205ENST00000590339 KRT12Q99456 494 aa9.94□□□□□ -0.82
VPS25-205ENST00000590339 NAP1L3Q99457 506 aaPredicted RBP9.94□□□□□ -0.82
VPS25-205ENST00000590339 RNF39Q9H2S5 420 aa9.94□□□□□ -0.82
VPS25-205ENST00000590339 NSUN3Q9H649 340 aaKnown RBP9.94□□□□□ -0.82
VPS25-205ENST00000590339 UBE2ZQ9H832 354 aaPredicted RBP9.94□□□□□ -0.82
VPS25-205ENST00000590339 CHST12Q9NRB3 414 aa9.94□□□□□ -0.82
VPS25-205ENST00000590339 PARVAQ9NVD7 372 aa9.94□□□□□ -0.82
VPS25-205ENST00000590339 SLTMQ9NWH9 1034 aaKnown RBP eCLIP9.94□□□□□ -0.82
VPS25-205ENST00000590339 TMEM161AQ9NX61 479 aa9.94□□□□□ -0.82
VPS25-205ENST00000590339 GDAP2Q9NXN4 497 aa9.94□□□□□ -0.82
VPS25-205ENST00000590339 KIAA1257Q9ULG3 409 aa9.94□□□□□ -0.82
VPS25-205ENST00000590339 L1RE1Q9UN81 338 aa9.94□□□□□ -0.82
VPS25-205ENST00000590339 CEP83Q9Y592 693 aa9.94□□□□□ -0.82
VPS25-205ENST00000590339 NME7Q9Y5B8 376 aa9.94□□□□□ -0.82
VPS25-205ENST00000590339 CHD9Q3L8U1 2897 aa9.94□□□□□ -0.82
VPS25-205ENST00000590339 PRRC2BQ5JSZ5 2229 aaKnown RBP9.94□□□□□ -0.82
VPS25-205ENST00000590339 EYSQ5T1H1 3165 aa9.93□□□□□ -0.82
VPS25-205ENST00000590339 TMEM191CA6NGB0 347 aa9.93□□□□□ -0.82
VPS25-205ENST00000590339 H3BQ06 376 aaPredicted RBP9.93□□□□□ -0.82
VPS25-205ENST00000590339 MYO1FO00160 1098 aa9.93□□□□□ -0.82
VPS25-205ENST00000590339 TNFRSF10AO00220 468 aa9.93□□□□□ -0.82
VPS25-205ENST00000590339 KRIT1O00522 736 aa9.93□□□□□ -0.82
VPS25-205ENST00000590339 MICAL2O94851 1124 aa9.93□□□□□ -0.82
VPS25-205ENST00000590339 ITGB1P05556 798 aa9.93□□□□□ -0.82
VPS25-205ENST00000590339 ITGA4P13612 1032 aa9.93□□□□□ -0.82
VPS25-205ENST00000590339 AKAP5P24588 427 aa9.93□□□□□ -0.82
VPS25-205ENST00000590339 DNAJB1P25685 340 aa9.93□□□□□ -0.82
VPS25-205ENST00000590339 PNPLA4P41247 253 aa9.93□□□□□ -0.82
VPS25-205ENST00000590339 GABRB2P47870 512 aa9.93□□□□□ -0.82
VPS25-205ENST00000590339 NDST1P52848 882 aa9.93□□□□□ -0.82
VPS25-205ENST00000590339 RWDD2BP57060 319 aa9.93□□□□□ -0.82
VPS25-205ENST00000590339 SOX4Q06945 474 aaPredicted RBP9.93□□□□□ -0.82
VPS25-205ENST00000590339 ZNF211Q13398 564 aaPredicted RBP9.93□□□□□ -0.82
VPS25-205ENST00000590339 STILQ15468 1287 aa9.93□□□□□ -0.82
VPS25-205ENST00000590339 SIX1Q15475 284 aaPredicted RBP9.93□□□□□ -0.82
VPS25-205ENST00000590339 CNGA2Q16280 664 aa9.93□□□□□ -0.82
VPS25-205ENST00000590339 PPP2R5EQ16537 467 aa9.93□□□□□ -0.82
VPS25-205ENST00000590339 CYP1B1Q16678 543 aa9.93□□□□□ -0.82
VPS25-205ENST00000590339 MAP9Q49MG5 647 aa9.93□□□□□ -0.82
VPS25-205ENST00000590339 PKDCCQ504Y2 493 aa9.93□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms