RNA–Protein interactions for RNA: ENST00000588423.1

RETREG3-206, Transcript of reticulophagy regulator family member 3, humanhuman

TSL 4

Gene RETREG3, Length 559 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG3-206ENST00000588423 TANGO2Q6ICL3 276 aa17.08■□□□□ 0.32
RETREG3-206ENST00000588423 TMEM150AQ86TG1 271 aa17.08■□□□□ 0.32
RETREG3-206ENST00000588423 ACOT1Q86TX2 421 aa17.08■□□□□ 0.32
RETREG3-206ENST00000588423 PBXIP1Q96AQ6 731 aa17.08■□□□□ 0.32
RETREG3-206ENST00000588423 KXD1Q9BQD3 176 aa17.08■□□□□ 0.32
RETREG3-206ENST00000588423 NT5C1AQ9BXI3 368 aa17.08■□□□□ 0.32
RETREG3-206ENST00000588423 ZNF518BQ9C0D4 1074 aa17.08■□□□□ 0.32
RETREG3-206ENST00000588423 SLITRK6Q9H5Y7 841 aa17.08■□□□□ 0.32
RETREG3-206ENST00000588423 TASP1Q9H6P5 420 aa17.08■□□□□ 0.32
RETREG3-206ENST00000588423 DACH1Q9UI36 760 aa17.08■□□□□ 0.32
RETREG3-206ENST00000588423 F8VP50 259 aa17.07■□□□□ 0.32
RETREG3-206ENST00000588423 MBD3O95983 291 aa17.07■□□□□ 0.32
RETREG3-206ENST00000588423 ERCC5P28715 1186 aaPredicted RBP17.07■□□□□ 0.32
RETREG3-206ENST00000588423 PFKPQ01813 784 aa17.07■□□□□ 0.32
RETREG3-206ENST00000588423 CETN1Q12798 172 aa17.07■□□□□ 0.32
RETREG3-206ENST00000588423 STXBP5Q5T5C0 1151 aa17.07■□□□□ 0.32
RETREG3-206ENST00000588423 GPR158Q5T848 1215 aa17.07■□□□□ 0.32
RETREG3-206ENST00000588423 RBM43Q6ZSC3 357 aaKnown RBP17.07■□□□□ 0.32
RETREG3-206ENST00000588423 DENND5BQ6ZUT9 1274 aa17.07■□□□□ 0.32
RETREG3-206ENST00000588423 FAM35AQ86V20 835 aa17.07■□□□□ 0.32
RETREG3-206ENST00000588423 ST13P5Q8NFI4 369 aaPredicted RBP17.07■□□□□ 0.32
RETREG3-206ENST00000588423 DEPDC1BQ8WUY9 529 aa17.07■□□□□ 0.32
RETREG3-206ENST00000588423 SMARCD1Q96GM5 515 aa17.07■□□□□ 0.32
RETREG3-206ENST00000588423 MED15Q96RN5 788 aa17.07■□□□□ 0.32
RETREG3-206ENST00000588423 TTLL2Q9BWV7 592 aa17.07■□□□□ 0.32
RETREG3-206ENST00000588423 UTP3Q9NQZ2 479 aaKnown RBP eCLIP17.07■□□□□ 0.32
RETREG3-206ENST00000588423 OBP2AQ9NY56 170 aa17.07■□□□□ 0.32
RETREG3-206ENST00000588423 HMGXB4Q9UGU5 601 aa17.07■□□□□ 0.32
RETREG3-206ENST00000588423 MAGED2Q9UNF1 606 aaPredicted RBP17.07■□□□□ 0.32
RETREG3-206ENST00000588423 CLDN5O00501 218 aa17.06■□□□□ 0.32
RETREG3-206ENST00000588423 CFHP08603 1231 aa17.06■□□□□ 0.32
RETREG3-206ENST00000588423 GPC5P78333 572 aa17.06■□□□□ 0.32
RETREG3-206ENST00000588423 CYP4F8P98187 520 aa17.06■□□□□ 0.32
RETREG3-206ENST00000588423 KCNH2Q12809 1159 aa17.06■□□□□ 0.32
RETREG3-206ENST00000588423 PAQR9Q6ZVX9 377 aa17.06■□□□□ 0.32
RETREG3-206ENST00000588423 FUKQ8N0W3 1084 aa17.06■□□□□ 0.32
RETREG3-206ENST00000588423 FBXL6Q8N531 539 aa17.06■□□□□ 0.32
RETREG3-206ENST00000588423 WHAMMQ8TF30 809 aa17.06■□□□□ 0.32
RETREG3-206ENST00000588423 MRPS31Q92665 395 aaKnown RBP17.06■□□□□ 0.32
RETREG3-206ENST00000588423 TWNKQ96RR1 684 aa17.06■□□□□ 0.32
RETREG3-206ENST00000588423 MED10Q9BTT4 135 aa17.06■□□□□ 0.32
RETREG3-206ENST00000588423 PLA2G2FQ9BZM2 168 aa17.06■□□□□ 0.32
RETREG3-206ENST00000588423 CSNK1G1Q9HCP0 422 aa17.06■□□□□ 0.32
RETREG3-206ENST00000588423 FBXL21Q9UKT6 434 aa17.06■□□□□ 0.32
RETREG3-206ENST00000588423 UTP18Q9Y5J1 556 aaKnown RBP eCLIP17.06■□□□□ 0.32
RETREG3-206ENST00000588423 PTPRDP23468 1912 aa17.06■□□□□ 0.32
RETREG3-206ENST00000588423 TECTAO75443 2155 aa17.05■□□□□ 0.32
RETREG3-206ENST00000588423 TADA3O75528 432 aa17.05■□□□□ 0.32
RETREG3-206ENST00000588423 PSMC3P17980 439 aa17.05■□□□□ 0.32
RETREG3-206ENST00000588423 CD58P19256 250 aa17.05■□□□□ 0.32
RETREG3-206ENST00000588423 TBXAS1P24557 533 aaPredicted RBP17.05■□□□□ 0.32
RETREG3-206ENST00000588423 PPP3CCP48454 512 aa17.05■□□□□ 0.32
RETREG3-206ENST00000588423 CACNA2D1P54289 1103 aa17.05■□□□□ 0.32
RETREG3-206ENST00000588423 YWHAEP62258 255 aaKnown RBP17.05■□□□□ 0.32
RETREG3-206ENST00000588423 CUL2Q13617 745 aa17.05■□□□□ 0.32
RETREG3-206ENST00000588423 DPCR1Q3MIW9 517 aa17.05■□□□□ 0.32
RETREG3-206ENST00000588423 VITQ6UXI7 678 aa17.05■□□□□ 0.32
RETREG3-206ENST00000588423 ARID3BQ8IVW6 561 aaPredicted RBP17.05■□□□□ 0.32
RETREG3-206ENST00000588423 MFSD6LQ8IWD5 586 aa17.05■□□□□ 0.32
RETREG3-206ENST00000588423 SUGP1Q8IWZ8 645 aaKnown RBP17.05■□□□□ 0.32
RETREG3-206ENST00000588423 STKLD1Q8NE28 680 aa17.05■□□□□ 0.32
RETREG3-206ENST00000588423 TATDN2Q93075 761 aa17.05■□□□□ 0.32
RETREG3-206ENST00000588423 HNRNPABQ99729 332 aaKnown RBP17.05■□□□□ 0.32
RETREG3-206ENST00000588423 SLC46A2Q9BY10 475 aa17.05■□□□□ 0.32
RETREG3-206ENST00000588423 DMAP1Q9NPF5 467 aaPredicted RBP17.05■□□□□ 0.32
RETREG3-206ENST00000588423 CISHQ9NSE2 258 aa17.05■□□□□ 0.32
RETREG3-206ENST00000588423 TMEM30AQ9NV96 361 aa17.05■□□□□ 0.32
RETREG3-206ENST00000588423 MYO10Q9HD67 2058 aa17.05■□□□□ 0.32
RETREG3-206ENST00000588423 HEPACAM2A8MVW5 462 aa17.04■□□□□ 0.32
RETREG3-206ENST00000588423 AP1G2O75843 785 aa17.04■□□□□ 0.32
RETREG3-206ENST00000588423 AFPP02771 609 aaKnown RBP17.04■□□□□ 0.32
RETREG3-206ENST00000588423 PFKLP17858 780 aa17.04■□□□□ 0.32
RETREG3-206ENST00000588423 VIPR2P41587 438 aa17.04■□□□□ 0.32
RETREG3-206ENST00000588423 ORC1Q13415 861 aa17.04■□□□□ 0.32
RETREG3-206ENST00000588423 MON1AQ86VX9 555 aa17.04■□□□□ 0.32
RETREG3-206ENST00000588423 CMTM8Q8IZV2 173 aa17.04■□□□□ 0.32
RETREG3-206ENST00000588423 SIX5Q8N196 739 aa17.04■□□□□ 0.32
RETREG3-206ENST00000588423 NUP93Q8N1F7 819 aa17.04■□□□□ 0.32
RETREG3-206ENST00000588423 C12orf29Q8N999 325 aa17.04■□□□□ 0.32
RETREG3-206ENST00000588423 LMO3Q8TAP4 145 aa17.04■□□□□ 0.32
RETREG3-206ENST00000588423 SLC2A14Q8TDB8 520 aa17.04■□□□□ 0.32
RETREG3-206ENST00000588423 DNASE1L2Q92874 299 aa17.04■□□□□ 0.32
RETREG3-206ENST00000588423 CNOT6LQ96LI5 555 aaKnown RBP17.04■□□□□ 0.32
RETREG3-206ENST00000588423 TRMT61BQ9BVS5 477 aaKnown RBP17.04■□□□□ 0.32
RETREG3-206ENST00000588423 THAP9Q9H5L6 903 aa17.04■□□□□ 0.32
RETREG3-206ENST00000588423 TRPV5Q9NQA5 729 aa17.04■□□□□ 0.32
RETREG3-206ENST00000588423 COMMD8Q9NX08 183 aa17.04■□□□□ 0.32
RETREG3-206ENST00000588423 KRBA1A5PL33 1030 aa17.03■□□□□ 0.32
RETREG3-206ENST00000588423 DPYSL4O14531 572 aa17.03■□□□□ 0.32
RETREG3-206ENST00000588423 RTN3O95197 1032 aaPredicted RBP17.03■□□□□ 0.32
RETREG3-206ENST00000588423 PDGFBP01127 241 aaPredicted RBP17.03■□□□□ 0.32
RETREG3-206ENST00000588423 CCDC130P13994 396 aa17.03■□□□□ 0.32
RETREG3-206ENST00000588423 AVPR1AP37288 418 aa17.03■□□□□ 0.32
RETREG3-206ENST00000588423 USP46P62068 366 aa17.03■□□□□ 0.32
RETREG3-206ENST00000588423 FCHO2Q0JRZ9 810 aa17.03■□□□□ 0.32
RETREG3-206ENST00000588423 PHLDB3Q6NSJ2 640 aa17.03■□□□□ 0.32
RETREG3-206ENST00000588423 IRF2BP1Q8IU81 584 aa17.03■□□□□ 0.32
RETREG3-206ENST00000588423 OVCA2Q8WZ82 227 aa17.03■□□□□ 0.32
RETREG3-206ENST00000588423 IRF7Q92985 503 aa17.03■□□□□ 0.32
RETREG3-206ENST00000588423 CYFIP2Q96F07 1278 aa17.03■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 61.5 ms