RNA–Protein interactions for RNA: ENST00000587788.1

SDF2-206, Transcript of stromal cell derived factor 2, humanhuman

TSL 3

Gene SDF2, Length 444 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2-206ENST00000587788 FEZ2Q9UHY8 353 aaPredicted RBP6.11□□□□□ -1.43
SDF2-206ENST00000587788 PCDHB2Q9Y5E7 798 aa6.11□□□□□ -1.43
SDF2-206ENST00000587788 NR2E3Q9Y5X4 410 aa6.11□□□□□ -1.43
SDF2-206ENST00000587788 ALG6Q9Y672 507 aa6.11□□□□□ -1.43
SDF2-206ENST00000587788 MICAL3Q7RTP6 2002 aa6.1□□□□□ -1.43
SDF2-206ENST00000587788 GOLGA8IPA6NC78 632 aa6.1□□□□□ -1.43
SDF2-206ENST00000587788 A6NHS1 94 aa6.1□□□□□ -1.43
SDF2-206ENST00000587788 GOLGA8JA6NMD2 632 aa6.1□□□□□ -1.43
SDF2-206ENST00000587788 CYP26A1O43174 497 aa6.1□□□□□ -1.43
SDF2-206ENST00000587788 PQBP1O60828 265 aaKnown RBP6.1□□□□□ -1.43
SDF2-206ENST00000587788 PHF2O75151 1096 aa6.1□□□□□ -1.43
SDF2-206ENST00000587788 PHACTR2O75167 634 aa6.1□□□□□ -1.43
SDF2-206ENST00000587788 MMP3P08254 477 aa6.1□□□□□ -1.43
SDF2-206ENST00000587788 ZNF286BP0CG31 522 aa6.1□□□□□ -1.43
SDF2-206ENST00000587788 EPB42P16452 691 aa6.1□□□□□ -1.43
SDF2-206ENST00000587788 CHRNB2P17787 502 aa6.1□□□□□ -1.43
SDF2-206ENST00000587788 MAN1A1P33908 653 aa6.1□□□□□ -1.43
SDF2-206ENST00000587788 CTNNA1P35221 906 aaKnown RBP6.1□□□□□ -1.43
SDF2-206ENST00000587788 MAGEA10P43363 369 aaPredicted RBP6.1□□□□□ -1.43
SDF2-206ENST00000587788 CDK7P50613 346 aa6.1□□□□□ -1.43
SDF2-206ENST00000587788 DNA2P51530 1060 aa6.1□□□□□ -1.43
SDF2-206ENST00000587788 HNRNPH2P55795 449 aaKnown RBP6.1□□□□□ -1.43
SDF2-206ENST00000587788 DR1Q01658 176 aa6.1□□□□□ -1.43
SDF2-206ENST00000587788 FAAP100Q0VG06 881 aa6.1□□□□□ -1.43
SDF2-206ENST00000587788 LAMTOR4Q0VGL1 99 aa6.1□□□□□ -1.43
SDF2-206ENST00000587788 PTP4A2Q12974 167 aa6.1□□□□□ -1.43
SDF2-206ENST00000587788 ITGA7Q13683 1181 aa6.1□□□□□ -1.43
SDF2-206ENST00000587788 MAPK6Q16659 721 aa6.1□□□□□ -1.43
SDF2-206ENST00000587788 KYAT1Q16773 422 aa6.1□□□□□ -1.43
SDF2-206ENST00000587788 CLEC16AQ2KHT3 1053 aa6.1□□□□□ -1.43
SDF2-206ENST00000587788 ZACNQ401N2 412 aa6.1□□□□□ -1.43
SDF2-206ENST00000587788 EFHC2Q5JST6 749 aa6.1□□□□□ -1.43
SDF2-206ENST00000587788 PDE12Q6L8Q7 609 aaKnown RBP6.1□□□□□ -1.43
SDF2-206ENST00000587788 MTHFD1LQ6UB35 978 aa6.1□□□□□ -1.43
SDF2-206ENST00000587788 ZPBP2Q6X784 338 aa6.1□□□□□ -1.43
SDF2-206ENST00000587788 C15orf39Q6ZRI6 1047 aa6.1□□□□□ -1.43
SDF2-206ENST00000587788 SYDE1Q6ZW31 735 aaPredicted RBP6.1□□□□□ -1.43
SDF2-206ENST00000587788 ANKRD33Q7Z3H0 272 aa6.1□□□□□ -1.43
SDF2-206ENST00000587788 APBB1IPQ7Z5R6 666 aaPredicted RBP6.1□□□□□ -1.43
SDF2-206ENST00000587788 NOP9Q86U38 636 aaKnown RBP6.1□□□□□ -1.43
SDF2-206ENST00000587788 SPATS2Q86XZ4 545 aaKnown RBP6.1□□□□□ -1.43
SDF2-206ENST00000587788 ZBTB8OSQ8IWT0 167 aa6.1□□□□□ -1.43
SDF2-206ENST00000587788 FAM126BQ8IXS8 530 aa6.1□□□□□ -1.43
SDF2-206ENST00000587788 PGBD3Q8N328 593 aa6.1□□□□□ -1.43
SDF2-206ENST00000587788 SLC43A3Q8NBI5 491 aa6.1□□□□□ -1.43
SDF2-206ENST00000587788 PLEKHO2Q8TD55 490 aa6.1□□□□□ -1.43
SDF2-206ENST00000587788 BSNDQ8WZ55 320 aa6.1□□□□□ -1.43
SDF2-206ENST00000587788 TMEM143Q96AN5 459 aa6.1□□□□□ -1.43
SDF2-206ENST00000587788 CCDC127Q96BQ5 260 aa6.1□□□□□ -1.43
SDF2-206ENST00000587788 ARHGEF26Q96DR7 871 aa6.1□□□□□ -1.43
SDF2-206ENST00000587788 FAXDC2Q96IV6 333 aa6.1□□□□□ -1.43
SDF2-206ENST00000587788 KREMEN1Q96MU8 473 aa6.1□□□□□ -1.43
SDF2-206ENST00000587788 GDF15Q99988 308 aa6.1□□□□□ -1.43
SDF2-206ENST00000587788 FAM213AQ9BRX8 229 aa6.1□□□□□ -1.43
SDF2-206ENST00000587788 ERP44Q9BS26 406 aa6.1□□□□□ -1.43
SDF2-206ENST00000587788 MTG1Q9BT17 334 aaPredicted RBP6.1□□□□□ -1.43
SDF2-206ENST00000587788 NIF3L1Q9GZT8 377 aa6.1□□□□□ -1.43
SDF2-206ENST00000587788 MRPL47Q9HD33 250 aaKnown RBP6.1□□□□□ -1.43
SDF2-206ENST00000587788 OSGEPQ9NPF4 335 aa6.1□□□□□ -1.43
SDF2-206ENST00000587788 PRDM5Q9NQX1 630 aaPredicted RBP6.1□□□□□ -1.43
SDF2-206ENST00000587788 CUEDC1Q9NWM3 386 aaPredicted RBP6.1□□□□□ -1.43
SDF2-206ENST00000587788 EHD2Q9NZN4 543 aa6.1□□□□□ -1.43
SDF2-206ENST00000587788 PCYOX1Q9UHG3 505 aa6.1□□□□□ -1.43
SDF2-206ENST00000587788 AGO2Q9UKV8 859 aaKnown RBP6.1□□□□□ -1.43
SDF2-206ENST00000587788 HCN2Q9UL51 889 aa6.1□□□□□ -1.43
SDF2-206ENST00000587788 PACSIN2Q9UNF0 486 aaPredicted RBP6.1□□□□□ -1.43
SDF2-206ENST00000587788 SBDSQ9Y3A5 250 aaKnown RBP eCLIP6.1□□□□□ -1.43
SDF2-206ENST00000587788 PCDHA3Q9Y5H8 950 aa6.1□□□□□ -1.43
SDF2-206ENST00000587788 CEP290O15078 2479 aa6.1□□□□□ -1.43
SDF2-206ENST00000587788 UMODL1Q5DID0 1318 aa6.09□□□□□ -1.43
SDF2-206ENST00000587788 A0A0B4J269 797 aa6.09□□□□□ -1.43
SDF2-206ENST00000587788 SMIM35A0A1B0GVV1 85 aa6.09□□□□□ -1.43
SDF2-206ENST00000587788 ERICH4A6NGS2 130 aa6.09□□□□□ -1.43
SDF2-206ENST00000587788 ZBTB42B2RXF5 422 aa6.09□□□□□ -1.43
SDF2-206ENST00000587788 TISP43B9A030 160 aa6.09□□□□□ -1.43
SDF2-206ENST00000587788 ARVCFO00192 962 aa6.09□□□□□ -1.43
SDF2-206ENST00000587788 HAS3O00219 553 aa6.09□□□□□ -1.43
SDF2-206ENST00000587788 ACKR2O00590 384 aa6.09□□□□□ -1.43
SDF2-206ENST00000587788 CLDN3O15551 220 aa6.09□□□□□ -1.43
SDF2-206ENST00000587788 SPOPO43791 374 aa6.09□□□□□ -1.43
SDF2-206ENST00000587788 B4GALT4O60513 344 aa6.09□□□□□ -1.43
SDF2-206ENST00000587788 F2P00734 622 aa6.09□□□□□ -1.43
SDF2-206ENST00000587788 CD4P01730 458 aa6.09□□□□□ -1.43
SDF2-206ENST00000587788 C4BPAP04003 597 aaKnown RBP6.09□□□□□ -1.43
SDF2-206ENST00000587788 CLTBP09497 229 aa6.09□□□□□ -1.43
SDF2-206ENST00000587788 MYZAPP0CAP1 466 aa6.09□□□□□ -1.43
SDF2-206ENST00000587788 SRGAP2CP0DJJ0 459 aa6.09□□□□□ -1.43
SDF2-206ENST00000587788 DLATP10515 647 aaKnown RBP6.09□□□□□ -1.43
SDF2-206ENST00000587788 KRT5P13647 590 aa6.09□□□□□ -1.43
SDF2-206ENST00000587788 GLRA2P23416 452 aa6.09□□□□□ -1.43
SDF2-206ENST00000587788 MARK3P27448 753 aa6.09□□□□□ -1.43
SDF2-206ENST00000587788 CETN2P41208 172 aa6.09□□□□□ -1.43
SDF2-206ENST00000587788 FNTAP49354 379 aa6.09□□□□□ -1.43
SDF2-206ENST00000587788 PEX5P50542 639 aa6.09□□□□□ -1.43
SDF2-206ENST00000587788 RWDD2BP57060 319 aa6.09□□□□□ -1.43
SDF2-206ENST00000587788 RNASE9P60153 205 aaKnown RBP6.09□□□□□ -1.43
SDF2-206ENST00000587788 YWHAEP62258 255 aaKnown RBP6.09□□□□□ -1.43
SDF2-206ENST00000587788 FMO1Q01740 532 aa6.09□□□□□ -1.43
SDF2-206ENST00000587788 PTPN11Q06124 597 aaPredicted RBP6.09□□□□□ -1.43
SDF2-206ENST00000587788 MRPL58Q14197 206 aaKnown RBP6.09□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms