RNA–Protein interactions for RNA: ENST00000581021.5

SS18-218, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 4

Gene SS18, Length 588 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-218ENST00000581021 GREB1Q4ZG55 1949 aa21.41■■□□□ 1.02
SS18-218ENST00000581021 CILPO75339 1184 aa21.41■■□□□ 1.02
SS18-218ENST00000581021 PRAMEF12O95522 483 aa21.41■■□□□ 1.02
SS18-218ENST00000581021 CSH1P0DML2 217 aa21.41■■□□□ 1.02
SS18-218ENST00000581021 CSH2P0DML3 217 aa21.41■■□□□ 1.02
SS18-218ENST00000581021 MARSP56192 900 aaKnown RBP21.41■■□□□ 1.02
SS18-218ENST00000581021 GPR158Q5T848 1215 aa21.41■■□□□ 1.02
SS18-218ENST00000581021 BMP8AQ7Z5Y6 402 aa21.41■■□□□ 1.02
SS18-218ENST00000581021 FAM35AQ86V20 835 aa21.41■■□□□ 1.02
SS18-218ENST00000581021 CRYBG2Q8N1P7 616 aa21.41■■□□□ 1.02
SS18-218ENST00000581021 MLKLQ8NB16 471 aa21.41■■□□□ 1.02
SS18-218ENST00000581021 PBXIP1Q96AQ6 731 aa21.41■■□□□ 1.02
SS18-218ENST00000581021 ELSPBP1Q96BH3 223 aa21.41■■□□□ 1.02
SS18-218ENST00000581021 TRMT2BQ96GJ1 504 aaKnown RBP21.41■■□□□ 1.02
SS18-218ENST00000581021 LRRC3BQ96PB8 259 aa21.41■■□□□ 1.02
SS18-218ENST00000581021 SLITRK6Q9H5Y7 841 aa21.41■■□□□ 1.02
SS18-218ENST00000581021 TRPV4Q9HBA0 871 aa21.41■■□□□ 1.02
SS18-218ENST00000581021 SLC2A4RGQ9NR83 387 aa21.41■■□□□ 1.02
SS18-218ENST00000581021 FAM49BQ9NUQ9 324 aa21.41■■□□□ 1.02
SS18-218ENST00000581021 KRBA1A5PL33 1030 aa21.4■■□□□ 1.02
SS18-218ENST00000581021 GRIK1P39086 918 aa21.4■■□□□ 1.02
SS18-218ENST00000581021 GRM2Q14416 872 aa21.4■■□□□ 1.02
SS18-218ENST00000581021 TAF12Q16514 161 aa21.4■■□□□ 1.02
SS18-218ENST00000581021 VITQ6UXI7 678 aa21.4■■□□□ 1.02
SS18-218ENST00000581021 RBM43Q6ZSC3 357 aaKnown RBP21.4■■□□□ 1.02
SS18-218ENST00000581021 UNC93AQ86WB7 457 aa21.4■■□□□ 1.02
SS18-218ENST00000581021 LMO3Q8TAP4 145 aa21.4■■□□□ 1.02
SS18-218ENST00000581021 TNIP3Q96KP6 325 aa21.4■■□□□ 1.02
SS18-218ENST00000581021 SPATA17Q96L03 361 aa21.4■■□□□ 1.02
SS18-218ENST00000581021 C8orf48Q96LL4 319 aa21.4■■□□□ 1.02
SS18-218ENST00000581021 SLC46A2Q9BY10 475 aa21.4■■□□□ 1.02
SS18-218ENST00000581021 SMG9Q9H0W8 520 aaKnown RBP21.4■■□□□ 1.02
SS18-218ENST00000581021 FGF19O95750 216 aa21.39■■□□□ 1.01
SS18-218ENST00000581021 NPR3P17342 541 aa21.39■■□□□ 1.01
SS18-218ENST00000581021 CDC25CP30307 473 aa21.39■■□□□ 1.01
SS18-218ENST00000581021 VCPP55072 806 aaKnown RBP21.39■■□□□ 1.01
SS18-218ENST00000581021 SIX5Q8N196 739 aa21.39■■□□□ 1.01
SS18-218ENST00000581021 ZMIZ2Q8NF64 920 aa21.39■■□□□ 1.01
SS18-218ENST00000581021 SLC2A14Q8TDB8 520 aa21.39■■□□□ 1.01
SS18-218ENST00000581021 KCNK16Q96T55 309 aa21.39■■□□□ 1.01
SS18-218ENST00000581021 TASP1Q9H6P5 420 aa21.39■■□□□ 1.01
SS18-218ENST00000581021 ZFP14Q9HCL3 533 aa21.39■■□□□ 1.01
SS18-218ENST00000581021 KRT82Q9NSB4 513 aa21.39■■□□□ 1.01
SS18-218ENST00000581021 CA14Q9ULX7 337 aa21.39■■□□□ 1.01
SS18-218ENST00000581021 DENND4CQ5VZ89 1909 aa21.39■■□□□ 1.01
SS18-218ENST00000581021 COL4A2P08572 1712 aa21.38■■□□□ 1.01
SS18-218ENST00000581021 TRIM66O15016 1216 aa21.38■■□□□ 1.01
SS18-218ENST00000581021 PMM2O15305 246 aa21.38■■□□□ 1.01
SS18-218ENST00000581021 BEST1O76090 585 aa21.38■■□□□ 1.01
SS18-218ENST00000581021 LRMPQ12912 555 aa21.38■■□□□ 1.01
SS18-218ENST00000581021 CWF19L1Q69YN2 538 aaKnown RBP21.38■■□□□ 1.01
SS18-218ENST00000581021 TXNDC8Q6A555 127 aa21.38■■□□□ 1.01
SS18-218ENST00000581021 ARID3BQ8IVW6 561 aaPredicted RBP21.38■■□□□ 1.01
SS18-218ENST00000581021 FBXL6Q8N531 539 aa21.38■■□□□ 1.01
SS18-218ENST00000581021 UBR7Q8N806 425 aa21.38■■□□□ 1.01
SS18-218ENST00000581021 CCDC150Q8NCX0 1101 aa21.38■■□□□ 1.01
SS18-218ENST00000581021 RIN3Q8TB24 985 aa21.38■■□□□ 1.01
SS18-218ENST00000581021 CNOT6LQ96LI5 555 aaKnown RBP21.38■■□□□ 1.01
SS18-218ENST00000581021 TTLL2Q9BWV7 592 aa21.38■■□□□ 1.01
SS18-218ENST00000581021 CISHQ9NSE2 258 aa21.38■■□□□ 1.01
SS18-218ENST00000581021 WDFY4Q6ZS81 3184 aa21.38■■□□□ 1.01
SS18-218ENST00000581021 KMT2EQ8IZD2 1858 aa21.38■■□□□ 1.01
SS18-218ENST00000581021 NUP210Q8TEM1 1887 aaPredicted RBP21.37■■□□□ 1.01
SS18-218ENST00000581021 HEPACAM2A8MVW5 462 aa21.37■■□□□ 1.01
SS18-218ENST00000581021 GNA14O95837 355 aa21.37■■□□□ 1.01
SS18-218ENST00000581021 KCNH2Q12809 1159 aa21.37■■□□□ 1.01
SS18-218ENST00000581021 ZNF394Q53GI3 561 aa21.37■■□□□ 1.01
SS18-218ENST00000581021 WDR44Q5JSH3 913 aa21.37■■□□□ 1.01
SS18-218ENST00000581021 DENND5BQ6ZUT9 1274 aa21.37■■□□□ 1.01
SS18-218ENST00000581021 KAT5Q92993 513 aa21.37■■□□□ 1.01
SS18-218ENST00000581021 FAXDC2Q96IV6 333 aa21.37■■□□□ 1.01
SS18-218ENST00000581021 GCNAQ96QF7 691 aa21.37■■□□□ 1.01
SS18-218ENST00000581021 SLC22A12Q96S37 553 aa21.37■■□□□ 1.01
SS18-218ENST00000581021 SMOQ99835 787 aa21.37■■□□□ 1.01
SS18-218ENST00000581021 MED10Q9BTT4 135 aa21.37■■□□□ 1.01
SS18-218ENST00000581021 NT5C1AQ9BXI3 368 aa21.37■■□□□ 1.01
SS18-218ENST00000581021 GPR88Q9GZN0 384 aa21.37■■□□□ 1.01
SS18-218ENST00000581021 WNT16Q9UBV4 365 aa21.37■■□□□ 1.01
SS18-218ENST00000581021 FBXL21Q9UKT6 434 aa21.37■■□□□ 1.01
SS18-218ENST00000581021 TNFRSF10BO14763 440 aa21.36■■□□□ 1.01
SS18-218ENST00000581021 AP1G2O75843 785 aa21.36■■□□□ 1.01
SS18-218ENST00000581021 COL9A1P20849 921 aa21.36■■□□□ 1.01
SS18-218ENST00000581021 ANXA13P27216 316 aa21.36■■□□□ 1.01
SS18-218ENST00000581021 RAD23BP54727 409 aa21.36■■□□□ 1.01
SS18-218ENST00000581021 CUL2Q13617 745 aa21.36■■□□□ 1.01
SS18-218ENST00000581021 ARHGAP15Q53QZ3 475 aa21.36■■□□□ 1.01
SS18-218ENST00000581021 MAB21L3Q8N8X9 362 aa21.36■■□□□ 1.01
SS18-218ENST00000581021 SLC4A11Q8NBS3 891 aa21.36■■□□□ 1.01
SS18-218ENST00000581021 SMARCD1Q96GM5 515 aa21.36■■□□□ 1.01
SS18-218ENST00000581021 ARHGEF3Q9NR81 526 aa21.36■■□□□ 1.01
SS18-218ENST00000581021 CCL26Q9Y258 94 aa21.36■■□□□ 1.01
SS18-218ENST00000581021 MUC6Q6W4X9 2439 aa21.36■■□□□ 1.01
SS18-218ENST00000581021 C2orf78A6NCI8 922 aa21.35■■□□□ 1.01
SS18-218ENST00000581021 GOLGA6L22H0YM25 854 aa21.35■■□□□ 1.01
SS18-218ENST00000581021 ARNTLO00327 626 aa21.35■■□□□ 1.01
SS18-218ENST00000581021 AFPP02771 609 aaKnown RBP21.35■■□□□ 1.01
SS18-218ENST00000581021 ADORA2BP29275 332 aa21.35■■□□□ 1.01
SS18-218ENST00000581021 MON1AQ86VX9 555 aa21.35■■□□□ 1.01
SS18-218ENST00000581021 CMTM8Q8IZV2 173 aa21.35■■□□□ 1.01
SS18-218ENST00000581021 SCAMP5Q8TAC9 235 aa21.35■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms