RNA–Protein interactions for RNA: ENST00000568605.5

CLK3-224, Transcript of CDC like kinase 3, humanhuman

TSL 2

Gene CLK3, Length 1,047 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-224ENST00000568605 CRYBG2Q8N1P7 616 aa13.8□□□□□ -0.2
CLK3-224ENST00000568605 PPM1KQ8N3J5 372 aa13.8□□□□□ -0.2
CLK3-224ENST00000568605 MRPS31Q92665 395 aaKnown RBP13.8□□□□□ -0.2
CLK3-224ENST00000568605 EDAQ92838 391 aa13.8□□□□□ -0.2
CLK3-224ENST00000568605 KHSRPQ92945 711 aaKnown RBP eCLIP13.8□□□□□ -0.2
CLK3-224ENST00000568605 E2F7Q96AV8 911 aa13.8□□□□□ -0.2
CLK3-224ENST00000568605 TCEAL4Q96EI5 215 aa13.8□□□□□ -0.2
CLK3-224ENST00000568605 MCRS1Q96EZ8 462 aa13.8□□□□□ -0.2
CLK3-224ENST00000568605 FAM81BQ96LP2 452 aa13.8□□□□□ -0.2
CLK3-224ENST00000568605 LRRC3Q9BY71 257 aa13.8□□□□□ -0.2
CLK3-224ENST00000568605 ZNF518BQ9C0D4 1074 aa13.8□□□□□ -0.2
CLK3-224ENST00000568605 NAT10Q9H0A0 1025 aaKnown RBP13.8□□□□□ -0.2
CLK3-224ENST00000568605 ZNF334Q9HCZ1 680 aaPredicted RBP13.8□□□□□ -0.2
CLK3-224ENST00000568605 CISHQ9NSE2 258 aa13.8□□□□□ -0.2
CLK3-224ENST00000568605 HMGXB4Q9UGU5 601 aa13.8□□□□□ -0.2
CLK3-224ENST00000568605 NUMBLQ9Y6R0 609 aa13.8□□□□□ -0.2
CLK3-224ENST00000568605 SOBPA7XYQ1 873 aa13.79□□□□□ -0.2
CLK3-224ENST00000568605 F8VP50 259 aa13.79□□□□□ -0.2
CLK3-224ENST00000568605 RTN3O95197 1032 aaPredicted RBP13.79□□□□□ -0.2
CLK3-224ENST00000568605 FAM200BP0CF97 657 aa13.79□□□□□ -0.2
CLK3-224ENST00000568605 EEF1GP26641 437 aaKnown RBP13.79□□□□□ -0.2
CLK3-224ENST00000568605 GPR15P49685 360 aa13.79□□□□□ -0.2
CLK3-224ENST00000568605 PDE6CP51160 858 aa13.79□□□□□ -0.2
CLK3-224ENST00000568605 KLHL40Q2TBA0 621 aa13.79□□□□□ -0.2
CLK3-224ENST00000568605 GPR158Q5T848 1215 aa13.79□□□□□ -0.2
CLK3-224ENST00000568605 CAVIN1Q6NZI2 390 aaKnown RBP13.79□□□□□ -0.2
CLK3-224ENST00000568605 ANKRD20A12PQ8NF67 263 aa13.79□□□□□ -0.2
CLK3-224ENST00000568605 ZSCAN18Q8TBC5 510 aaPredicted RBP13.79□□□□□ -0.2
CLK3-224ENST00000568605 ENOX1Q8TC92 643 aaKnown RBP13.79□□□□□ -0.2
CLK3-224ENST00000568605 SLC2A14Q8TDB8 520 aa13.79□□□□□ -0.2
CLK3-224ENST00000568605 GPR152Q8TDT2 470 aa13.79□□□□□ -0.2
CLK3-224ENST00000568605 SMARCD2Q92925 531 aa13.79□□□□□ -0.2
CLK3-224ENST00000568605 ELSPBP1Q96BH3 223 aa13.79□□□□□ -0.2
CLK3-224ENST00000568605 MYRFLQ96LU7 910 aa13.79□□□□□ -0.2
CLK3-224ENST00000568605 SLITRK1Q96PX8 696 aa13.79□□□□□ -0.2
CLK3-224ENST00000568605 B3GNT5Q9BYG0 378 aa13.79□□□□□ -0.2
CLK3-224ENST00000568605 ZFP14Q9HCL3 533 aa13.79□□□□□ -0.2
CLK3-224ENST00000568605 FAM49BQ9NUQ9 324 aa13.79□□□□□ -0.2
CLK3-224ENST00000568605 NFE2L3Q9Y4A8 694 aa13.79□□□□□ -0.2
CLK3-224ENST00000568605 GTPBP10A4D1E9 387 aaKnown RBP13.78□□□□□ -0.2
CLK3-224ENST00000568605 KCNJ18B7U540 433 aa13.78□□□□□ -0.2
CLK3-224ENST00000568605 LRRN2O75325 713 aa13.78□□□□□ -0.2
CLK3-224ENST00000568605 ECI2O75521 394 aa13.78□□□□□ -0.2
CLK3-224ENST00000568605 AP1G2O75843 785 aa13.78□□□□□ -0.2
CLK3-224ENST00000568605 LETM1O95202 739 aaPredicted RBP13.78□□□□□ -0.2
CLK3-224ENST00000568605 SRFP11831 508 aa13.78□□□□□ -0.2
CLK3-224ENST00000568605 CCDC130P13994 396 aa13.78□□□□□ -0.2
CLK3-224ENST00000568605 HMGA1P17096 107 aaKnown RBP13.78□□□□□ -0.2
CLK3-224ENST00000568605 GJA1P17302 382 aa13.78□□□□□ -0.2
CLK3-224ENST00000568605 PPP3CCP48454 512 aa13.78□□□□□ -0.2
CLK3-224ENST00000568605 SLC8A3P57103 927 aa13.78□□□□□ -0.2
CLK3-224ENST00000568605 GCNT1Q02742 428 aa13.78□□□□□ -0.2
CLK3-224ENST00000568605 LRMPQ12912 555 aa13.78□□□□□ -0.2
CLK3-224ENST00000568605 ORC1Q13415 861 aa13.78□□□□□ -0.2
CLK3-224ENST00000568605 KCNJ12Q14500 433 aa13.78□□□□□ -0.2
CLK3-224ENST00000568605 TMEM31Q5JXX7 168 aa13.78□□□□□ -0.2
CLK3-224ENST00000568605 SDHAF4Q5VUM1 108 aa13.78□□□□□ -0.2
CLK3-224ENST00000568605 PARM1Q6UWI2 310 aa13.78□□□□□ -0.2
CLK3-224ENST00000568605 GBP6Q6ZN66 633 aa13.78□□□□□ -0.2
CLK3-224ENST00000568605 GAREM2Q75VX8 874 aa13.78□□□□□ -0.2
CLK3-224ENST00000568605 FUKQ8N0W3 1084 aa13.78□□□□□ -0.2
CLK3-224ENST00000568605 DEPDC1BQ8WUY9 529 aa13.78□□□□□ -0.2
CLK3-224ENST00000568605 FGF14Q92915 247 aa13.78□□□□□ -0.2
CLK3-224ENST00000568605 TATDN2Q93075 761 aa13.78□□□□□ -0.2
CLK3-224ENST00000568605 CYFIP2Q96F07 1278 aa13.78□□□□□ -0.2
CLK3-224ENST00000568605 ASB16Q96NS5 453 aa13.78□□□□□ -0.2
CLK3-224ENST00000568605 MED15Q96RN5 788 aa13.78□□□□□ -0.2
CLK3-224ENST00000568605 HNRNPABQ99729 332 aaKnown RBP13.78□□□□□ -0.2
CLK3-224ENST00000568605 ARID3AQ99856 593 aa13.78□□□□□ -0.2
CLK3-224ENST00000568605 KXD1Q9BQD3 176 aa13.78□□□□□ -0.2
CLK3-224ENST00000568605 INTS2Q9H0H0 1204 aaKnown RBP13.78□□□□□ -0.2
CLK3-224ENST00000568605 EPHX3Q9H6B9 360 aa13.78□□□□□ -0.2
CLK3-224ENST00000568605 TASP1Q9H6P5 420 aa13.78□□□□□ -0.2
CLK3-224ENST00000568605 IL21Q9HBE4 155 aa13.78□□□□□ -0.2
CLK3-224ENST00000568605 TMEM63CQ9P1W3 806 aa13.78□□□□□ -0.2
CLK3-224ENST00000568605 CLDN5O00501 218 aa13.77□□□□□ -0.21
CLK3-224ENST00000568605 PES1O00541 588 aaKnown RBP13.77□□□□□ -0.21
CLK3-224ENST00000568605 DPYSL4O14531 572 aa13.77□□□□□ -0.21
CLK3-224ENST00000568605 MOSPD3O75425 235 aa13.77□□□□□ -0.21
CLK3-224ENST00000568605 ADORA2BP29275 332 aa13.77□□□□□ -0.21
CLK3-224ENST00000568605 AVPR1AP37288 418 aa13.77□□□□□ -0.21
CLK3-224ENST00000568605 CYP4F8P98187 520 aa13.77□□□□□ -0.21
CLK3-224ENST00000568605 PFKPQ01813 784 aa13.77□□□□□ -0.21
CLK3-224ENST00000568605 MYL5Q02045 173 aa13.77□□□□□ -0.21
CLK3-224ENST00000568605 TYRO3Q06418 890 aa13.77□□□□□ -0.21
CLK3-224ENST00000568605 ZNF394Q53GI3 561 aa13.77□□□□□ -0.21
CLK3-224ENST00000568605 FAM78AQ5JUQ0 283 aa13.77□□□□□ -0.21
CLK3-224ENST00000568605 ZNF318Q5VUA4 2279 aa13.77□□□□□ -0.21
CLK3-224ENST00000568605 TRIM67Q6ZTA4 783 aa13.77□□□□□ -0.21
CLK3-224ENST00000568605 ENOSF1Q7L5Y1 443 aa13.77□□□□□ -0.21
CLK3-224ENST00000568605 NUP93Q8N1F7 819 aa13.77□□□□□ -0.21
CLK3-224ENST00000568605 EHBP1Q8NDI1 1231 aa13.77□□□□□ -0.21
CLK3-224ENST00000568605 STKLD1Q8NE28 680 aa13.77□□□□□ -0.21
CLK3-224ENST00000568605 PDZD8Q8NEN9 1154 aa13.77□□□□□ -0.21
CLK3-224ENST00000568605 TMEM176AQ96HP8 235 aa13.77□□□□□ -0.21
CLK3-224ENST00000568605 HEXIM2Q96MH2 286 aaKnown RBP13.77□□□□□ -0.21
CLK3-224ENST00000568605 TWNKQ96RR1 684 aa13.77□□□□□ -0.21
CLK3-224ENST00000568605 TUBGCP2Q9BSJ2 902 aa13.77□□□□□ -0.21
CLK3-224ENST00000568605 TTLL2Q9BWV7 592 aa13.77□□□□□ -0.21
CLK3-224ENST00000568605 KIF9Q9HAQ2 790 aa13.77□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms