RNA–Protein interactions for RNA: ENST00000558190.5

ATXN3-248, Transcript of ataxin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATXN3, Length 26,812 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-248ENST00000558190 CRNNQ9UBG3 495 aaPredicted RBP3.83□□□□□ -1.8
ATXN3-248ENST00000558190 CCRL2O00421 344 aa3.83□□□□□ -1.8
ATXN3-248ENST00000558190 SRP54P61011 504 aaKnown RBP3.83□□□□□ -1.8
ATXN3-248ENST00000558190 SKA1Q96BD8 255 aa3.83□□□□□ -1.8
ATXN3-248ENST00000558190 RNF145Q96MT1 663 aa3.83□□□□□ -1.8
ATXN3-248ENST00000558190 TOR3AQ9H497 397 aa3.83□□□□□ -1.8
ATXN3-248ENST00000558190 JMJD4Q9H9V9 463 aa3.83□□□□□ -1.8
ATXN3-248ENST00000558190 PPCSQ9HAB8 311 aa3.83□□□□□ -1.8
ATXN3-248ENST00000558190 KLHL11Q9NVR0 708 aa3.83□□□□□ -1.8
ATXN3-248ENST00000558190 SYNPO2Q9UMS6 1093 aa3.83□□□□□ -1.8
ATXN3-248ENST00000558190 STARD13Q9Y3M8 1113 aa3.83□□□□□ -1.8
ATXN3-248ENST00000558190 PRR23D1E9PI22 279 aaPredicted RBP3.83□□□□□ -1.8
ATXN3-248ENST00000558190 CST8O60676 142 aa3.83□□□□□ -1.8
ATXN3-248ENST00000558190 PRR23D2P0DMB1 279 aaPredicted RBP3.83□□□□□ -1.8
ATXN3-248ENST00000558190 PRKACBP22694 351 aa3.83□□□□□ -1.8
ATXN3-248ENST00000558190 DMP1Q13316 513 aaPredicted RBP3.83□□□□□ -1.8
ATXN3-248ENST00000558190 PLEKHM3Q6ZWE6 761 aa3.83□□□□□ -1.8
ATXN3-248ENST00000558190 BTN2A2Q8WVV5 523 aa3.83□□□□□ -1.8
ATXN3-248ENST00000558190 TRNAU1APQ9NX07 287 aaKnown RBP3.83□□□□□ -1.8
ATXN3-248ENST00000558190 FAM86B2P0C5J1 330 aa3.83□□□□□ -1.8
ATXN3-248ENST00000558190 YWHABP31946 246 aaKnown RBP3.83□□□□□ -1.8
ATXN3-248ENST00000558190 TMEM214Q6NUQ4 689 aaKnown RBP3.83□□□□□ -1.8
ATXN3-248ENST00000558190 AAGABQ6PD74 315 aa3.83□□□□□ -1.8
ATXN3-248ENST00000558190 BNC2Q6ZN30 1099 aaPredicted RBP3.83□□□□□ -1.8
ATXN3-248ENST00000558190 STOX1Q6ZVD7 989 aa3.83□□□□□ -1.8
ATXN3-248ENST00000558190 NET1Q7Z628 596 aaPredicted RBP3.83□□□□□ -1.8
ATXN3-248ENST00000558190 MYDGFQ969H8 173 aa3.83□□□□□ -1.8
ATXN3-248ENST00000558190 APBA2Q99767 749 aa3.83□□□□□ -1.8
ATXN3-248ENST00000558190 PNPOQ9NVS9 261 aa3.83□□□□□ -1.8
ATXN3-248ENST00000558190 ACOT9Q9Y305 439 aa3.83□□□□□ -1.8
ATXN3-248ENST00000558190 ARPC4-TTLL3A0A0A6YYG9 625 aa3.83□□□□□ -1.8
ATXN3-248ENST00000558190 PGLSO95336 258 aa3.83□□□□□ -1.8
ATXN3-248ENST00000558190 TRIM71Q2Q1W2 868 aaKnown RBP3.83□□□□□ -1.8
ATXN3-248ENST00000558190 DUPD1Q68J44 220 aa3.83□□□□□ -1.8
ATXN3-248ENST00000558190 CYP2R1Q6VVX0 501 aa3.83□□□□□ -1.8
ATXN3-248ENST00000558190 ASAP3Q8TDY4 903 aa3.83□□□□□ -1.8
ATXN3-248ENST00000558190 NSMCE3Q96MG7 304 aa3.83□□□□□ -1.8
ATXN3-248ENST00000558190 CCDC28BQ9BUN5 200 aa3.83□□□□□ -1.8
ATXN3-248ENST00000558190 SPATA16Q9BXB7 569 aa3.83□□□□□ -1.8
ATXN3-248ENST00000558190 TIMMDC1Q9NPL8 285 aa3.83□□□□□ -1.8
ATXN3-248ENST00000558190 INPP4BO15327 924 aa3.83□□□□□ -1.8
ATXN3-248ENST00000558190 PIAS1O75925 651 aa3.83□□□□□ -1.8
ATXN3-248ENST00000558190 CPSF4O95639 269 aaKnown RBP3.83□□□□□ -1.8
ATXN3-248ENST00000558190 ATXN8OSP0DMR3 200 aa3.83□□□□□ -1.8
ATXN3-248ENST00000558190 GARTP22102 1010 aa3.83□□□□□ -1.8
ATXN3-248ENST00000558190 DUOXA2Q1HG44 320 aa3.83□□□□□ -1.8
ATXN3-248ENST00000558190 ECHDC2Q86YB7 292 aa3.83□□□□□ -1.8
ATXN3-248ENST00000558190 EVPLLA8MZ36 301 aa3.83□□□□□ -1.8
ATXN3-248ENST00000558190 MYCLP1P12525 358 aaPredicted RBP3.83□□□□□ -1.8
ATXN3-248ENST00000558190 GSTM5P46439 218 aa3.83□□□□□ -1.8
ATXN3-248ENST00000558190 MXD4Q14582 209 aaPredicted RBP3.83□□□□□ -1.8
ATXN3-248ENST00000558190 ALLCQ8N6M5 410 aa3.83□□□□□ -1.8
ATXN3-248ENST00000558190 ZNF577Q9BSK1 485 aa3.83□□□□□ -1.8
ATXN3-248ENST00000558190 KATNAL1Q9BW62 490 aa3.83□□□□□ -1.8
ATXN3-248ENST00000558190 MRPL39Q9NYK5 338 aaKnown RBP3.83□□□□□ -1.8
ATXN3-248ENST00000558190 CDYLQ9Y232 598 aa3.83□□□□□ -1.8
ATXN3-248ENST00000558190 KCNN4O15554 427 aa3.83□□□□□ -1.8
ATXN3-248ENST00000558190 PDE8BO95263 885 aa3.83□□□□□ -1.8
ATXN3-248ENST00000558190 ETS1P14921 441 aa3.83□□□□□ -1.8
ATXN3-248ENST00000558190 FOSL2P15408 326 aa3.83□□□□□ -1.8
ATXN3-248ENST00000558190 ZNF829Q3KNS6 432 aaPredicted RBP3.83□□□□□ -1.8
ATXN3-248ENST00000558190 PPP4R4Q6NUP7 873 aa3.83□□□□□ -1.8
ATXN3-248ENST00000558190 PNMA1Q8ND90 353 aa3.83□□□□□ -1.8
ATXN3-248ENST00000558190 ENTPD7Q9NQZ7 604 aa3.83□□□□□ -1.8
ATXN3-248ENST00000558190 RCCD1A6NED2 376 aa3.83□□□□□ -1.8
ATXN3-248ENST00000558190 E9PBE3 544 aa3.83□□□□□ -1.8
ATXN3-248ENST00000558190 CDC40O60508 579 aaKnown RBP eCLIP3.83□□□□□ -1.8
ATXN3-248ENST00000558190 COX4I1P13073 169 aa3.83□□□□□ -1.8
ATXN3-248ENST00000558190 SEPHS1P49903 392 aa3.83□□□□□ -1.8
ATXN3-248ENST00000558190 FAM69CQ0P6D2 419 aa3.83□□□□□ -1.8
ATXN3-248ENST00000558190 MTFR1Q15390 333 aa3.83□□□□□ -1.8
ATXN3-248ENST00000558190 ZC2HC1CQ53FD0 456 aaPredicted RBP3.83□□□□□ -1.8
ATXN3-248ENST00000558190 LRRC47Q8N1G4 583 aaKnown RBP3.83□□□□□ -1.8
ATXN3-248ENST00000558190 PPP1R14AQ96A00 147 aa3.83□□□□□ -1.8
ATXN3-248ENST00000558190 SH3KBP1Q96B97 665 aa3.83□□□□□ -1.8
ATXN3-248ENST00000558190 SPRTNQ9H040 489 aaPredicted RBP3.83□□□□□ -1.8
ATXN3-248ENST00000558190 CCDC130P13994 396 aa3.82□□□□□ -1.8
ATXN3-248ENST00000558190 PDGFRAP16234 1089 aa3.82□□□□□ -1.8
ATXN3-248ENST00000558190 TFDP1Q14186 410 aa3.82□□□□□ -1.8
ATXN3-248ENST00000558190 TAF8Q7Z7C8 310 aa3.82□□□□□ -1.8
ATXN3-248ENST00000558190 CLPTM1LQ96KA5 538 aa3.82□□□□□ -1.8
ATXN3-248ENST00000558190 C11orf70Q9BRQ4 267 aa3.82□□□□□ -1.8
ATXN3-248ENST00000558190 TEX13BQ9BXU2 312 aa3.82□□□□□ -1.8
ATXN3-248ENST00000558190 NAGPAQ9UK23 515 aa3.82□□□□□ -1.8
ATXN3-248ENST00000558190 KRT87PA6NCN2 255 aa3.82□□□□□ -1.8
ATXN3-248ENST00000558190 CDK8P49336 464 aa3.82□□□□□ -1.8
ATXN3-248ENST00000558190 STARP49675 285 aa3.82□□□□□ -1.8
ATXN3-248ENST00000558190 SWI5Q1ZZU3 235 aa3.82□□□□□ -1.8
ATXN3-248ENST00000558190 CENPLQ8N0S6 344 aaPredicted RBP3.82□□□□□ -1.8
ATXN3-248ENST00000558190 FNIP1Q8TF40 1166 aa3.82□□□□□ -1.8
ATXN3-248ENST00000558190 FIG4Q92562 907 aa3.82□□□□□ -1.8
ATXN3-248ENST00000558190 RBM17Q96I25 401 aaKnown RBP3.82□□□□□ -1.8
ATXN3-248ENST00000558190 OSBPL11Q9BXB4 747 aa3.82□□□□□ -1.8
ATXN3-248ENST00000558190 ZNF222Q9UK12 451 aa3.82□□□□□ -1.8
ATXN3-248ENST00000558190 RALBP11234 206 aa3.82□□□□□ -1.8
ATXN3-248ENST00000558190 ATF4P18848 351 aaPredicted RBP3.82□□□□□ -1.8
ATXN3-248ENST00000558190 PLEKHA8Q96JA3 519 aa3.82□□□□□ -1.8
ATXN3-248ENST00000558190 FAR2Q96K12 515 aa3.82□□□□□ -1.8
ATXN3-248ENST00000558190 PRDM11Q9NQV5 511 aa3.82□□□□□ -1.8
ATXN3-248ENST00000558190 CCNA2P20248 432 aa3.82□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 97.3 ms