RNA–Protein interactions for RNA: ENST00000554891.5

HNRNPC-213, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

TSL 5

Gene HNRNPC, Length 644 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-213ENST00000554891 NAIF1Q69YI7 327 aaPredicted RBP11.34□□□□□ -0.59
HNRNPC-213ENST00000554891 MON1AQ86VX9 555 aa11.34□□□□□ -0.59
HNRNPC-213ENST00000554891 CELF5Q8N6W0 485 aaKnown RBP11.34□□□□□ -0.59
HNRNPC-213ENST00000554891 ARL14EPQ8N8R7 260 aaPredicted RBP11.34□□□□□ -0.59
HNRNPC-213ENST00000554891 OR6B3Q8NGW1 331 aa11.34□□□□□ -0.59
HNRNPC-213ENST00000554891 SPATA18Q8TC71 538 aa11.34□□□□□ -0.59
HNRNPC-213ENST00000554891 NELL1Q92832 810 aa11.34□□□□□ -0.59
HNRNPC-213ENST00000554891 GCNAQ96QF7 691 aa11.34□□□□□ -0.59
HNRNPC-213ENST00000554891 FAM83CQ9BQN1 747 aa11.34□□□□□ -0.59
HNRNPC-213ENST00000554891 SDCBP2Q9H190 292 aa11.34□□□□□ -0.59
HNRNPC-213ENST00000554891 EBF3Q9H4W6 596 aa11.34□□□□□ -0.59
HNRNPC-213ENST00000554891 PRMT8Q9NR22 394 aaPredicted RBP11.34□□□□□ -0.59
HNRNPC-213ENST00000554891 TDP1Q9NUW8 608 aa11.34□□□□□ -0.59
HNRNPC-213ENST00000554891 EXOC1Q9NV70 894 aa11.34□□□□□ -0.59
HNRNPC-213ENST00000554891 MAGEC2Q9UBF1 373 aaPredicted RBP11.34□□□□□ -0.59
HNRNPC-213ENST00000554891 NXF1Q9UBU9 619 aaKnown RBP11.34□□□□□ -0.59
HNRNPC-213ENST00000554891 FBXO4Q9UKT5 387 aa11.34□□□□□ -0.59
HNRNPC-213ENST00000554891 CDH9Q9ULB4 789 aa11.34□□□□□ -0.59
HNRNPC-213ENST00000554891 MAPK8IP1Q9UQF2 711 aa11.34□□□□□ -0.59
HNRNPC-213ENST00000554891 R3HCC1Q9Y3T6 440 aaKnown RBP11.34□□□□□ -0.59
HNRNPC-213ENST00000554891 MYO16Q9Y6X6 1858 aa11.34□□□□□ -0.59
HNRNPC-213ENST00000554891 ZNF292O60281 2723 aa11.33□□□□□ -0.6
HNRNPC-213ENST00000554891 FAM237AA0A1B0GTK4 181 aa11.33□□□□□ -0.6
HNRNPC-213ENST00000554891 TACC1O75410 805 aa11.33□□□□□ -0.6
HNRNPC-213ENST00000554891 C4BPAP04003 597 aaKnown RBP11.33□□□□□ -0.6
HNRNPC-213ENST00000554891 RPN1P04843 607 aaKnown RBP11.33□□□□□ -0.6
HNRNPC-213ENST00000554891 ARSAP15289 507 aa11.33□□□□□ -0.6
HNRNPC-213ENST00000554891 PTPN1P18031 435 aaKnown RBP11.33□□□□□ -0.6
HNRNPC-213ENST00000554891 AVPR1AP37288 418 aa11.33□□□□□ -0.6
HNRNPC-213ENST00000554891 GRIK1P39086 918 aa11.33□□□□□ -0.6
HNRNPC-213ENST00000554891 MAGEA9P43362 315 aa11.33□□□□□ -0.6
HNRNPC-213ENST00000554891 MAGEA11P43364 429 aa11.33□□□□□ -0.6
HNRNPC-213ENST00000554891 SYKP43405 635 aa11.33□□□□□ -0.6
HNRNPC-213ENST00000554891 RAP1GAPP47736 663 aa11.33□□□□□ -0.6
HNRNPC-213ENST00000554891 SATB1Q01826 763 aa11.33□□□□□ -0.6
HNRNPC-213ENST00000554891 DMWDQ09019 674 aa11.33□□□□□ -0.6
HNRNPC-213ENST00000554891 ZNF528Q3MIS6 628 aa11.33□□□□□ -0.6
HNRNPC-213ENST00000554891 PKN3Q6P5Z2 889 aa11.33□□□□□ -0.6
HNRNPC-213ENST00000554891 FSIP1Q8NA03 581 aa11.33□□□□□ -0.6
HNRNPC-213ENST00000554891 ZBTB44Q8NCP5 570 aa11.33□□□□□ -0.6
HNRNPC-213ENST00000554891 TTC16Q8NEE8 873 aa11.33□□□□□ -0.6
HNRNPC-213ENST00000554891 MYCBPAPQ8TBZ2 947 aa11.33□□□□□ -0.6
HNRNPC-213ENST00000554891 MRPS31Q92665 395 aaKnown RBP11.33□□□□□ -0.6
HNRNPC-213ENST00000554891 TRMT2BQ96GJ1 504 aaKnown RBP11.33□□□□□ -0.6
HNRNPC-213ENST00000554891 FUBP3Q96I24 572 aaKnown RBP eCLIP11.33□□□□□ -0.69e-8■■□□□ 14.1
HNRNPC-213ENST00000554891 B3GNT5Q9BYG0 378 aa11.33□□□□□ -0.6
HNRNPC-213ENST00000554891 SMYD3Q9H7B4 428 aa11.33□□□□□ -0.6
HNRNPC-213ENST00000554891 FBRSL1Q9HCM7 1045 aaKnown RBP11.33□□□□□ -0.6
HNRNPC-213ENST00000554891 TRPC7Q9HCX4 862 aa11.33□□□□□ -0.6
HNRNPC-213ENST00000554891 UTP3Q9NQZ2 479 aaKnown RBP eCLIP11.33□□□□□ -0.63e-7■■■■■ 34.8
HNRNPC-213ENST00000554891 POLR3BQ9NW08 1133 aaPredicted RBP11.33□□□□□ -0.6
HNRNPC-213ENST00000554891 GCNT4Q9P109 453 aa11.33□□□□□ -0.6
HNRNPC-213ENST00000554891 SDK1Q7Z5N4 2213 aa11.32□□□□□ -0.6
HNRNPC-213ENST00000554891 F8VP50 259 aa11.32□□□□□ -0.6
HNRNPC-213ENST00000554891 LILRB5O75023 590 aa11.32□□□□□ -0.6
HNRNPC-213ENST00000554891 MLLT6P55198 1093 aaPredicted RBP11.32□□□□□ -0.6
HNRNPC-213ENST00000554891 CLDN10P78369 228 aa11.32□□□□□ -0.6
HNRNPC-213ENST00000554891 DPYDQ12882 1025 aa11.32□□□□□ -0.6
HNRNPC-213ENST00000554891 PSMD2Q13200 908 aa11.32□□□□□ -0.6
HNRNPC-213ENST00000554891 TRPC3Q13507 836 aa11.32□□□□□ -0.6
HNRNPC-213ENST00000554891 RUNX3Q13761 415 aa11.32□□□□□ -0.6
HNRNPC-213ENST00000554891 ITPRIPL2Q3MIP1 535 aa11.32□□□□□ -0.6
HNRNPC-213ENST00000554891 SPOPLQ6IQ16 392 aa11.32□□□□□ -0.6
HNRNPC-213ENST00000554891 SCARA5Q6ZMJ2 495 aa11.32□□□□□ -0.6
HNRNPC-213ENST00000554891 KRBA2Q6ZNG9 492 aa11.32□□□□□ -0.6
HNRNPC-213ENST00000554891 C4orf50Q6ZRC1 276 aa11.32□□□□□ -0.6
HNRNPC-213ENST00000554891 PAQR9Q6ZVX9 377 aa11.32□□□□□ -0.6
HNRNPC-213ENST00000554891 SLC9A9Q8IVB4 645 aa11.32□□□□□ -0.6
HNRNPC-213ENST00000554891 ZNF518BQ9C0D4 1074 aa11.32□□□□□ -0.6
HNRNPC-213ENST00000554891 LINC00597Q9H2U6 94 aa11.32□□□□□ -0.6
HNRNPC-213ENST00000554891 SNX25Q9H3E2 840 aa11.32□□□□□ -0.6
HNRNPC-213ENST00000554891 SEMA4AQ9H3S1 761 aa11.32□□□□□ -0.6
HNRNPC-213ENST00000554891 C8orf33Q9H7E9 229 aaPredicted RBP11.32□□□□□ -0.6
HNRNPC-213ENST00000554891 ZSCAN32Q9NX65 697 aa11.32□□□□□ -0.6
HNRNPC-213ENST00000554891 CGNQ9P2M7 1197 aaKnown RBP11.32□□□□□ -0.6
HNRNPC-213ENST00000554891 DMXL1Q9Y485 3027 aa11.32□□□□□ -0.6
HNRNPC-213ENST00000554891 EML5Q05BV3 1969 aa11.32□□□□□ -0.6
HNRNPC-213ENST00000554891 RALGAPA1Q6GYQ0 2036 aa11.31□□□□□ -0.6
HNRNPC-213ENST00000554891 ANTXRLA6NF34 631 aa11.31□□□□□ -0.6
HNRNPC-213ENST00000554891 A8MXQ7 604 aa11.31□□□□□ -0.6
HNRNPC-213ENST00000554891 PDXKO00764 312 aa11.31□□□□□ -0.6
HNRNPC-213ENST00000554891 KINO60870 393 aaKnown RBP11.31□□□□□ -0.6
HNRNPC-213ENST00000554891 PHACTR2O75167 634 aa11.31□□□□□ -0.6
HNRNPC-213ENST00000554891 RHOBTB3O94955 611 aa11.31□□□□□ -0.6
HNRNPC-213ENST00000554891 ZNF202O95125 648 aa11.31□□□□□ -0.6
HNRNPC-213ENST00000554891 STAU1O95793 577 aaKnown RBP11.31□□□□□ -0.6
HNRNPC-213ENST00000554891 NR3C1P04150 777 aa11.31□□□□□ -0.6
HNRNPC-213ENST00000554891 DDX6P26196 483 aaKnown RBP eCLIP11.31□□□□□ -0.6
HNRNPC-213ENST00000554891 TNNC1P63316 161 aa11.31□□□□□ -0.6
HNRNPC-213ENST00000554891 SRSF5Q13243 272 aaKnown RBP11.31□□□□□ -0.6
HNRNPC-213ENST00000554891 ORC1Q13415 861 aa11.31□□□□□ -0.6
HNRNPC-213ENST00000554891 BIRC3Q13489 604 aa11.31□□□□□ -0.6
HNRNPC-213ENST00000554891 NCOA4Q13772 614 aa11.31□□□□□ -0.6
HNRNPC-213ENST00000554891 CCINQ13939 588 aa11.31□□□□□ -0.6
HNRNPC-213ENST00000554891 ZNF77Q15935 545 aa11.31□□□□□ -0.6
HNRNPC-213ENST00000554891 CEP135Q66GS9 1140 aa11.31□□□□□ -0.6
HNRNPC-213ENST00000554891 FSTL4Q6MZW2 842 aa11.31□□□□□ -0.6
HNRNPC-213ENST00000554891 ZC3H14Q6PJT7 736 aaKnown RBP11.31□□□□□ -0.6
HNRNPC-213ENST00000554891 VSTM1Q6UX27 236 aa11.31□□□□□ -0.6
HNRNPC-213ENST00000554891 MAMSTRQ6ZN01 415 aa11.31□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms