RNA–Protein interactions for RNA: ENST00000548825.6

PRPF40B-209, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

APPRIS P2 TSL 5 BASIC

Gene PRPF40B, Length 3,307 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-209ENST00000548825 BHMG1C9JSJ3 638 aaPredicted RBP14.33□□□□□ -0.12
PRPF40B-209ENST00000548825 E5RJQ4 531 aa14.33□□□□□ -0.12
PRPF40B-209ENST00000548825 RASSF9O75901 435 aa14.33□□□□□ -0.12
PRPF40B-209ENST00000548825 INSRRP14616 1297 aa14.33□□□□□ -0.12
PRPF40B-209ENST00000548825 CLNS1AP54105 237 aaKnown RBP14.33□□□□□ -0.12
PRPF40B-209ENST00000548825 ATXN1P54253 815 aaKnown RBP14.33□□□□□ -0.12
PRPF40B-209ENST00000548825 ZC3H12AQ5D1E8 599 aaKnown RBP14.33□□□□□ -0.12
PRPF40B-209ENST00000548825 XRRA1Q6P2D8 792 aa14.33□□□□□ -0.12
PRPF40B-209ENST00000548825 METTL7BQ6UX53 244 aa14.33□□□□□ -0.12
PRPF40B-209ENST00000548825 PHF13Q86YI8 300 aaPredicted RBP14.33□□□□□ -0.12
PRPF40B-209ENST00000548825 APOBEC3FQ8IUX4 373 aaKnown RBP14.33□□□□□ -0.12
PRPF40B-209ENST00000548825 C12orf50Q8NA57 414 aaPredicted RBP14.33□□□□□ -0.12
PRPF40B-209ENST00000548825 SLC17A7Q9P2U7 560 aa14.33□□□□□ -0.12
PRPF40B-209ENST00000548825 ASAP2O43150 1006 aa14.33□□□□□ -0.12
PRPF40B-209ENST00000548825 PRPSAP2O60256 369 aa14.33□□□□□ -0.12
PRPF40B-209ENST00000548825 DIAPH2O60879 1101 aa14.33□□□□□ -0.12
PRPF40B-209ENST00000548825 USP2O75604 605 aaPredicted RBP14.33□□□□□ -0.12
PRPF40B-209ENST00000548825 ATP6V1G2O95670 118 aa14.33□□□□□ -0.12
PRPF40B-209ENST00000548825 RPL22P35268 128 aaKnown RBP14.33□□□□□ -0.12
PRPF40B-209ENST00000548825 RABGGTBP53611 331 aa14.33□□□□□ -0.12
PRPF40B-209ENST00000548825 ZNF280AP59817 542 aaPredicted RBP14.33□□□□□ -0.12
PRPF40B-209ENST00000548825 LMNB2Q03252 620 aa14.33□□□□□ -0.12
PRPF40B-209ENST00000548825 EMC10Q5UCC4 262 aa14.33□□□□□ -0.12
PRPF40B-209ENST00000548825 CKAP2Q8WWK9 683 aa14.33□□□□□ -0.12
PRPF40B-209ENST00000548825 P3H4Q92791 437 aa14.33□□□□□ -0.12
PRPF40B-209ENST00000548825 ATXN7L3BQ96GX2 97 aa14.33□□□□□ -0.12
PRPF40B-209ENST00000548825 LRRC37BQ96QE4 947 aa14.33□□□□□ -0.12
PRPF40B-209ENST00000548825 CDT1Q9H211 546 aa14.33□□□□□ -0.12
PRPF40B-209ENST00000548825 KDM4CQ9H3R0 1056 aa14.33□□□□□ -0.12
PRPF40B-209ENST00000548825 LAMA3Q16787 3333 aa14.32□□□□□ -0.12
PRPF40B-209ENST00000548825 C5orf60A6NFR6 353 aa14.32□□□□□ -0.12
PRPF40B-209ENST00000548825 NPTXRO95502 500 aa14.32□□□□□ -0.12
PRPF40B-209ENST00000548825 MT-ND3P03897 115 aa14.32□□□□□ -0.12
PRPF40B-209ENST00000548825 INHBAP08476 426 aa14.32□□□□□ -0.12
PRPF40B-209ENST00000548825 LCP1P13796 627 aa14.32□□□□□ -0.12
PRPF40B-209ENST00000548825 CDKN2BP42772 138 aa14.32□□□□□ -0.12
PRPF40B-209ENST00000548825 ARL4CP56559 192 aa14.32□□□□□ -0.12
PRPF40B-209ENST00000548825 CRADDP78560 199 aa14.32□□□□□ -0.12
PRPF40B-209ENST00000548825 PIGWQ7Z7B1 504 aa14.32□□□□□ -0.12
PRPF40B-209ENST00000548825 ECHDC2Q86YB7 292 aa14.32□□□□□ -0.12
PRPF40B-209ENST00000548825 WDR49Q8IV35 697 aa14.32□□□□□ -0.12
PRPF40B-209ENST00000548825 ZCCHC9Q8N567 271 aaKnown RBP14.32□□□□□ -0.12
PRPF40B-209ENST00000548825 C1orf127Q8N9H9 656 aa14.32□□□□□ -0.12
PRPF40B-209ENST00000548825 MAML1Q92585 1016 aa14.32□□□□□ -0.12
PRPF40B-209ENST00000548825 NDRG1Q92597 394 aaKnown RBP14.32□□□□□ -0.12
PRPF40B-209ENST00000548825 HPDLQ96IR7 371 aa14.32□□□□□ -0.12
PRPF40B-209ENST00000548825 FAM111AQ96PZ2 611 aa14.32□□□□□ -0.12
PRPF40B-209ENST00000548825 PAFAH2Q99487 392 aa14.32□□□□□ -0.12
PRPF40B-209ENST00000548825 MMP19Q99542 508 aa14.32□□□□□ -0.12
PRPF40B-209ENST00000548825 SDCBP2Q9H190 292 aa14.32□□□□□ -0.12
PRPF40B-209ENST00000548825 CLEC11AQ9Y240 323 aa14.32□□□□□ -0.12
PRPF40B-209ENST00000548825 SKAP2O75563 359 aaPredicted RBP14.32□□□□□ -0.12
PRPF40B-209ENST00000548825 ELK3P41970 407 aa14.32□□□□□ -0.12
PRPF40B-209ENST00000548825 NDST1P52848 882 aa14.32□□□□□ -0.12
PRPF40B-209ENST00000548825 RCN2Q14257 317 aa14.32□□□□□ -0.12
PRPF40B-209ENST00000548825 PIGHQ14442 188 aaPredicted RBP14.32□□□□□ -0.12
PRPF40B-209ENST00000548825 MPZL3Q6UWV2 235 aa14.32□□□□□ -0.12
PRPF40B-209ENST00000548825 FAM228AQ86W67 206 aa14.32□□□□□ -0.12
PRPF40B-209ENST00000548825 ALLCQ8N6M5 410 aa14.32□□□□□ -0.12
PRPF40B-209ENST00000548825 CCDC110Q8TBZ0 833 aa14.32□□□□□ -0.12
PRPF40B-209ENST00000548825 TRIM6Q9C030 488 aaPredicted RBP14.32□□□□□ -0.12
PRPF40B-209ENST00000548825 MYLK2Q9H1R3 596 aa14.32□□□□□ -0.12
PRPF40B-209ENST00000548825 IL1RAPL1Q9NZN1 696 aa14.32□□□□□ -0.12
PRPF40B-209ENST00000548825 USP18Q9UMW8 372 aa14.32□□□□□ -0.12
PRPF40B-209ENST00000548825 MICAL2O94851 1124 aa14.31□□□□□ -0.12
PRPF40B-209ENST00000548825 TAC1P20366 129 aa14.31□□□□□ -0.12
PRPF40B-209ENST00000548825 EFNA5P52803 228 aa14.31□□□□□ -0.12
PRPF40B-209ENST00000548825 COPS2P61201 443 aa14.31□□□□□ -0.12
PRPF40B-209ENST00000548825 NCALDP61601 193 aa14.31□□□□□ -0.12
PRPF40B-209ENST00000548825 MAP3K10Q02779 954 aa14.31□□□□□ -0.12
PRPF40B-209ENST00000548825 CAV1Q03135 178 aa14.31□□□□□ -0.12
PRPF40B-209ENST00000548825 PTP4A2Q12974 167 aa14.31□□□□□ -0.12
PRPF40B-209ENST00000548825 IER5Q5VY09 327 aa14.31□□□□□ -0.12
PRPF40B-209ENST00000548825 TCP10LQ8TDR4 215 aa14.31□□□□□ -0.12
PRPF40B-209ENST00000548825 AGAP11Q8TF27 550 aa14.31□□□□□ -0.12
PRPF40B-209ENST00000548825 RXFP2Q8WXD0 754 aa14.31□□□□□ -0.12
PRPF40B-209ENST00000548825 CXCL16Q9H2A7 254 aa14.31□□□□□ -0.12
PRPF40B-209ENST00000548825 TTLL3Q9Y4R7 772 aa14.31□□□□□ -0.12
PRPF40B-209ENST00000548825 MAFO75444 373 aaPredicted RBP14.31□□□□□ -0.12
PRPF40B-209ENST00000548825 TMEM63AO94886 807 aa14.31□□□□□ -0.12
PRPF40B-209ENST00000548825 KLRC2P26717 231 aa14.31□□□□□ -0.12
PRPF40B-209ENST00000548825 PTPN11Q06124 597 aaPredicted RBP14.31□□□□□ -0.12
PRPF40B-209ENST00000548825 LRRC6Q86X45 466 aa14.31□□□□□ -0.12
PRPF40B-209ENST00000548825 AFG1LQ8WV93 481 aa14.31□□□□□ -0.12
PRPF40B-209ENST00000548825 LAMA2P24043 3122 aaKnown RBP14.31□□□□□ -0.12
PRPF40B-209ENST00000548825 HOXC6P09630 235 aa14.31□□□□□ -0.12
PRPF40B-209ENST00000548825 NQO1P15559 274 aaKnown RBP14.31□□□□□ -0.12
PRPF40B-209ENST00000548825 RPS12P25398 132 aaKnown RBP14.31□□□□□ -0.12
PRPF40B-209ENST00000548825 YWHAEP62258 255 aaKnown RBP14.31□□□□□ -0.12
PRPF40B-209ENST00000548825 LBX2Q6XYB7 198 aa14.31□□□□□ -0.12
PRPF40B-209ENST00000548825 CENPTQ96BT3 561 aa14.31□□□□□ -0.12
PRPF40B-209ENST00000548825 PGLYRP2Q96PD5 576 aa14.31□□□□□ -0.12
PRPF40B-209ENST00000548825 ELOVL4Q9GZR5 314 aa14.31□□□□□ -0.12
PRPF40B-209ENST00000548825 DHX35Q9H5Z1 703 aaKnown RBP14.31□□□□□ -0.12
PRPF40B-209ENST00000548825 GPRC5DQ9NZD1 345 aa14.31□□□□□ -0.12
PRPF40B-209ENST00000548825 SNCAIPQ9Y6H5 919 aa14.31□□□□□ -0.12
PRPF40B-209ENST00000548825 NFASCO94856 1347 aa14.31□□□□□ -0.12
PRPF40B-209ENST00000548825 KDELR1P24390 212 aa14.3□□□□□ -0.12
PRPF40B-209ENST00000548825 RFC5P40937 340 aa14.3□□□□□ -0.12
PRPF40B-209ENST00000548825 ASPAP45381 313 aa14.3□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 51.1 ms