RNA–Protein interactions for RNA: ENST00000543982.5

XRCC1-202, Transcript of X-ray repair cross complementing 1, humanhuman

TSL 2 BASIC

Gene XRCC1, Length 1,994 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC1-202ENST00000543982 SPG21Q9NZD8 308 aa16.86■□□□□ 0.29
XRCC1-202ENST00000543982 CNOT8Q9UFF9 292 aaKnown RBP16.86■□□□□ 0.29
XRCC1-202ENST00000543982 C2CD2LO14523 706 aa16.86■□□□□ 0.29
XRCC1-202ENST00000543982 LAG3P18627 525 aa16.86■□□□□ 0.29
XRCC1-202ENST00000543982 THEM5Q8N1Q8 247 aa16.86■□□□□ 0.29
XRCC1-202ENST00000543982 TTC9BQ8N6N2 239 aa16.86■□□□□ 0.29
XRCC1-202ENST00000543982 MYRIPQ8NFW9 859 aa16.86■□□□□ 0.29
XRCC1-202ENST00000543982 CTNNBL1Q8WYA6 563 aaPredicted RBP16.86■□□□□ 0.29
XRCC1-202ENST00000543982 MED10Q9BTT4 135 aa16.86■□□□□ 0.29
XRCC1-202ENST00000543982 NR2E3Q9Y5X4 410 aa16.86■□□□□ 0.29
XRCC1-202ENST00000543982 NCANO14594 1321 aa16.85■□□□□ 0.29
XRCC1-202ENST00000543982 BTNL10A8MVZ5 291 aa16.85■□□□□ 0.29
XRCC1-202ENST00000543982 E5RJQ4 531 aa16.85■□□□□ 0.29
XRCC1-202ENST00000543982 H0YGN5 161 aa16.85■□□□□ 0.29
XRCC1-202ENST00000543982 URI1O94763 535 aaPredicted RBP16.85■□□□□ 0.29
XRCC1-202ENST00000543982 BDNFP23560 247 aa16.85■□□□□ 0.29
XRCC1-202ENST00000543982 PLCB3Q01970 1234 aa16.85■□□□□ 0.29
XRCC1-202ENST00000543982 PTPROQ16827 1216 aa16.85■□□□□ 0.29
XRCC1-202ENST00000543982 SLC39A12Q504Y0 691 aa16.85■□□□□ 0.29
XRCC1-202ENST00000543982 CLEC20AQ6ZU45 233 aa16.85■□□□□ 0.29
XRCC1-202ENST00000543982 ERICH1Q86X53 443 aa16.85■□□□□ 0.29
XRCC1-202ENST00000543982 RIN2Q8WYP3 895 aaPredicted RBP16.85■□□□□ 0.29
XRCC1-202ENST00000543982 NDRG1Q92597 394 aaKnown RBP16.85■□□□□ 0.29
XRCC1-202ENST00000543982 PGLYRP2Q96PD5 576 aa16.85■□□□□ 0.29
XRCC1-202ENST00000543982 DUSP16Q9BY84 665 aa16.85■□□□□ 0.29
XRCC1-202ENST00000543982 CRISPLD1Q9H336 500 aa16.85■□□□□ 0.29
XRCC1-202ENST00000543982 ATP8B3O60423 1300 aa16.85■□□□□ 0.29
XRCC1-202ENST00000543982 GRID2IPA4D2P6 1211 aa16.84■□□□□ 0.29
XRCC1-202ENST00000543982 CTAGE9A4FU28 777 aa16.84■□□□□ 0.29
XRCC1-202ENST00000543982 CYP2F1P24903 491 aa16.84■□□□□ 0.29
XRCC1-202ENST00000543982 ARPP19P56211 112 aa16.84■□□□□ 0.29
XRCC1-202ENST00000543982 MAP3K7CLP57077 242 aa16.84■□□□□ 0.29
XRCC1-202ENST00000543982 C1QBPQ07021 282 aaKnown RBP16.84■□□□□ 0.29
XRCC1-202ENST00000543982 MAMLD1Q13495 774 aa16.84■□□□□ 0.29
XRCC1-202ENST00000543982 GPRIN1Q7Z2K8 1008 aa16.84■□□□□ 0.29
XRCC1-202ENST00000543982 XYLT1Q86Y38 959 aa16.84■□□□□ 0.29
XRCC1-202ENST00000543982 RNF10Q8N5U6 811 aaKnown RBP16.84■□□□□ 0.29
XRCC1-202ENST00000543982 KLHL23Q8NBE8 558 aa16.84■□□□□ 0.29
XRCC1-202ENST00000543982 ATAD1Q8NBU5 361 aa16.84■□□□□ 0.29
XRCC1-202ENST00000543982 RFFLQ8WZ73 363 aa16.84■□□□□ 0.29
XRCC1-202ENST00000543982 RNPC3Q96LT9 517 aaKnown RBP16.84■□□□□ 0.29
XRCC1-202ENST00000543982 C17orf80Q9BSJ5 609 aa16.84■□□□□ 0.29
XRCC1-202ENST00000543982 SLC4A5Q9BY07 1137 aa16.84■□□□□ 0.29
XRCC1-202ENST00000543982 ST7Q9NRC1 585 aa16.84■□□□□ 0.29
XRCC1-202ENST00000543982 KRT82Q9NSB4 513 aa16.84■□□□□ 0.29
XRCC1-202ENST00000543982 HYOU1Q9Y4L1 999 aa16.84■□□□□ 0.29
XRCC1-202ENST00000543982 LINC01553A4QN01 128 aa16.84■□□□□ 0.29
XRCC1-202ENST00000543982 HHLA1C9JL84 531 aa16.84■□□□□ 0.29
XRCC1-202ENST00000543982 AP1G2O75843 785 aa16.84■□□□□ 0.29
XRCC1-202ENST00000543982 FGF18O76093 207 aa16.84■□□□□ 0.29
XRCC1-202ENST00000543982 PBX2P40425 430 aa16.84■□□□□ 0.29
XRCC1-202ENST00000543982 NOP2P46087 812 aaKnown RBP16.84■□□□□ 0.29
XRCC1-202ENST00000543982 NDUFV1P49821 464 aa16.84■□□□□ 0.29
XRCC1-202ENST00000543982 BST2Q10589 180 aaKnown RBP16.84■□□□□ 0.29
XRCC1-202ENST00000543982 STILQ15468 1287 aa16.84■□□□□ 0.29
XRCC1-202ENST00000543982 TAF5Q15542 800 aa16.84■□□□□ 0.29
XRCC1-202ENST00000543982 USP41Q3LFD5 358 aa16.84■□□□□ 0.29
XRCC1-202ENST00000543982 STKLD1Q8NE28 680 aa16.84■□□□□ 0.29
XRCC1-202ENST00000543982 TRIM58Q8NG06 486 aa16.84■□□□□ 0.29
XRCC1-202ENST00000543982 TPCN2Q8NHX9 752 aa16.84■□□□□ 0.29
XRCC1-202ENST00000543982 CLEC4CQ8WTT0 213 aa16.84■□□□□ 0.29
XRCC1-202ENST00000543982 NAPGQ99747 312 aaPredicted RBP16.84■□□□□ 0.29
XRCC1-202ENST00000543982 GDF15Q99988 308 aa16.84■□□□□ 0.29
XRCC1-202ENST00000543982 NUP85Q9BW27 656 aa16.84■□□□□ 0.29
XRCC1-202ENST00000543982 HESX1Q9UBX0 185 aa16.84■□□□□ 0.29
XRCC1-202ENST00000543982 TNRC18O15417 2968 aaPredicted RBP16.83■□□□□ 0.28
XRCC1-202ENST00000543982 PALMO75781 387 aa16.83■□□□□ 0.28
XRCC1-202ENST00000543982 SOD2P04179 222 aa16.83■□□□□ 0.28
XRCC1-202ENST00000543982 NPR3P17342 541 aa16.83■□□□□ 0.28
XRCC1-202ENST00000543982 GABRB2P47870 512 aa16.83■□□□□ 0.28
XRCC1-202ENST00000543982 GPR15P49685 360 aa16.83■□□□□ 0.28
XRCC1-202ENST00000543982 BCAT1P54687 386 aa16.83■□□□□ 0.28
XRCC1-202ENST00000543982 RPL7AP62424 266 aaKnown RBP16.83■□□□□ 0.28
XRCC1-202ENST00000543982 ELAVL2Q12926 359 aaKnown RBP16.83■□□□□ 0.28
XRCC1-202ENST00000543982 PLEKHA7Q6IQ23 1121 aa16.83■□□□□ 0.28
XRCC1-202ENST00000543982 RNF19BQ6ZMZ0 732 aa16.83■□□□□ 0.28
XRCC1-202ENST00000543982 TMEM110Q86TL2 294 aa16.83■□□□□ 0.28
XRCC1-202ENST00000543982 DDX53Q86TM3 631 aaKnown RBP16.83■□□□□ 0.28
XRCC1-202ENST00000543982 PIGZQ86VD9 579 aa16.83■□□□□ 0.28
XRCC1-202ENST00000543982 SCUBE3Q8IX30 993 aa16.83■□□□□ 0.28
XRCC1-202ENST00000543982 VPS52Q8N1B4 723 aa16.83■□□□□ 0.28
XRCC1-202ENST00000543982 LRRC57Q8N9N7 239 aa16.83■□□□□ 0.28
XRCC1-202ENST00000543982 KHSRPQ92945 711 aaKnown RBP eCLIP16.83■□□□□ 0.28
XRCC1-202ENST00000543982 TMEM169Q96HH4 297 aa16.83■□□□□ 0.28
XRCC1-202ENST00000543982 CLSTN3Q9BQT9 956 aa16.83■□□□□ 0.28
XRCC1-202ENST00000543982 CTTNBP2NLQ9P2B4 639 aa16.83■□□□□ 0.28
XRCC1-202ENST00000543982 YBX2Q9Y2T7 364 aaKnown RBP16.83■□□□□ 0.28
XRCC1-202ENST00000543982 CEP83Q9Y592 693 aa16.83■□□□□ 0.28
XRCC1-202ENST00000543982 A0A0A6YYK5 440 aaPredicted RBP16.82■□□□□ 0.28
XRCC1-202ENST00000543982 ARHGEF37A1IGU5 675 aa16.82■□□□□ 0.28
XRCC1-202ENST00000543982 GOLGA8SH3BPF8 625 aa16.82■□□□□ 0.28
XRCC1-202ENST00000543982 PAPSS1O43252 624 aaPredicted RBP16.82■□□□□ 0.28
XRCC1-202ENST00000543982 BUB1BO60566 1050 aaPredicted RBP16.82■□□□□ 0.28
XRCC1-202ENST00000543982 SOAT2O75908 522 aa16.82■□□□□ 0.28
XRCC1-202ENST00000543982 DNAJB1P25685 340 aa16.82■□□□□ 0.28
XRCC1-202ENST00000543982 DNAJB2P25686 324 aa16.82■□□□□ 0.28
XRCC1-202ENST00000543982 RPL34P49207 117 aaKnown RBP16.82■□□□□ 0.28
XRCC1-202ENST00000543982 NAP1L1P55209 391 aaKnown RBP16.82■□□□□ 0.28
XRCC1-202ENST00000543982 TSPY1Q01534 308 aa16.82■□□□□ 0.28
XRCC1-202ENST00000543982 PPP1R15BQ5SWA1 713 aa16.82■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms