RNA–Protein interactions for RNA: ENST00000540763.5

DDX55-207, Transcript of DEAD-box helicase 55, humanhuman

TSL 3

Gene DDX55, Length 799 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-207ENST00000540763 ZNF394Q53GI3 561 aa20.63■□□□□ 0.89
DDX55-207ENST00000540763 ARHGAP17Q68EM7 881 aa20.63■□□□□ 0.89
DDX55-207ENST00000540763 TMEM270Q6UE05 265 aa20.63■□□□□ 0.89
DDX55-207ENST00000540763 FEZF2Q8TBJ5 459 aa20.63■□□□□ 0.89
DDX55-207ENST00000540763 SHC3Q92529 594 aa20.63■□□□□ 0.89
DDX55-207ENST00000540763 KAT5Q92993 513 aa20.63■□□□□ 0.89
DDX55-207ENST00000540763 ZNF518BQ9C0D4 1074 aa20.63■□□□□ 0.89
DDX55-207ENST00000540763 PCDHB4Q9Y5E5 795 aa20.63■□□□□ 0.89
DDX55-207ENST00000540763 ZNF197O14709 1029 aa20.62■□□□□ 0.89
DDX55-207ENST00000540763 SOAT2O75908 522 aa20.62■□□□□ 0.89
DDX55-207ENST00000540763 MICAL2O94851 1124 aa20.62■□□□□ 0.89
DDX55-207ENST00000540763 RHOP08100 348 aa20.62■□□□□ 0.89
DDX55-207ENST00000540763 ANXA13P27216 316 aa20.62■□□□□ 0.89
DDX55-207ENST00000540763 ORC1Q13415 861 aa20.62■□□□□ 0.89
DDX55-207ENST00000540763 KLHDC7AQ5VTJ3 777 aa20.62■□□□□ 0.89
DDX55-207ENST00000540763 PAQR9Q6ZVX9 377 aa20.62■□□□□ 0.89
DDX55-207ENST00000540763 GRASPQ7Z6J2 395 aaPredicted RBP20.62■□□□□ 0.89
DDX55-207ENST00000540763 ADHFE1Q8IWW8 467 aa20.62■□□□□ 0.89
DDX55-207ENST00000540763 SLC2A14Q8TDB8 520 aa20.62■□□□□ 0.89
DDX55-207ENST00000540763 CYFIP2Q96F07 1278 aa20.62■□□□□ 0.89
DDX55-207ENST00000540763 TRMT2BQ96GJ1 504 aaKnown RBP20.62■□□□□ 0.89
DDX55-207ENST00000540763 HEXIM2Q96MH2 286 aaKnown RBP20.62■□□□□ 0.89
DDX55-207ENST00000540763 LPIN3Q9BQK8 851 aa20.62■□□□□ 0.89
DDX55-207ENST00000540763 MED10Q9BTT4 135 aa20.62■□□□□ 0.89
DDX55-207ENST00000540763 CSNK1G1Q9HCP0 422 aa20.62■□□□□ 0.89
DDX55-207ENST00000540763 RTN4Q9NQC3 1192 aaKnown RBP20.62■□□□□ 0.89
DDX55-207ENST00000540763 ASAH2Q9NR71 780 aa20.62■□□□□ 0.89
DDX55-207ENST00000540763 FAM49BQ9NUQ9 324 aa20.62■□□□□ 0.89
DDX55-207ENST00000540763 CDH22Q9UJ99 828 aa20.62■□□□□ 0.89
DDX55-207ENST00000540763 SIK3Q9Y2K2 1263 aa20.62■□□□□ 0.89
DDX55-207ENST00000540763 NUP210Q8TEM1 1887 aaPredicted RBP20.61■□□□□ 0.89
DDX55-207ENST00000540763 MYO16Q9Y6X6 1858 aa20.61■□□□□ 0.89
DDX55-207ENST00000540763 A0A1B0GTH6 734 aa20.61■□□□□ 0.89
DDX55-207ENST00000540763 CLDN5O00501 218 aa20.61■□□□□ 0.89
DDX55-207ENST00000540763 VDRP11473 427 aa20.61■□□□□ 0.89
DDX55-207ENST00000540763 CCDC130P13994 396 aa20.61■□□□□ 0.89
DDX55-207ENST00000540763 GRIK1P39086 918 aa20.61■□□□□ 0.89
DDX55-207ENST00000540763 UBXN1Q04323 297 aa20.61■□□□□ 0.89
DDX55-207ENST00000540763 STILQ15468 1287 aa20.61■□□□□ 0.89
DDX55-207ENST00000540763 PDZD4Q76G19 769 aaPredicted RBP20.61■□□□□ 0.89
DDX55-207ENST00000540763 DNAJB7Q7Z6W7 309 aaPredicted RBP20.61■□□□□ 0.89
DDX55-207ENST00000540763 TMC8Q8IU68 726 aa20.61■□□□□ 0.89
DDX55-207ENST00000540763 SCN4BQ8IWT1 228 aa20.61■□□□□ 0.89
DDX55-207ENST00000540763 C12orf29Q8N999 325 aa20.61■□□□□ 0.89
DDX55-207ENST00000540763 RBBP8NLQ8NC74 664 aaPredicted RBP20.61■□□□□ 0.89
DDX55-207ENST00000540763 CORO1BQ9BR76 489 aa20.61■□□□□ 0.89
DDX55-207ENST00000540763 LSM14BQ9BX40 385 aaKnown RBP20.61■□□□□ 0.89
DDX55-207ENST00000540763 LRRC3Q9BY71 257 aa20.61■□□□□ 0.89
DDX55-207ENST00000540763 EPHX3Q9H6B9 360 aa20.61■□□□□ 0.89
DDX55-207ENST00000540763 PNPLA8Q9NP80 782 aa20.61■□□□□ 0.89
DDX55-207ENST00000540763 DMAP1Q9NPF5 467 aaPredicted RBP20.61■□□□□ 0.89
DDX55-207ENST00000540763 KRT82Q9NSB4 513 aa20.61■□□□□ 0.89
DDX55-207ENST00000540763 HCFC1R1Q9NWW0 138 aa20.61■□□□□ 0.89
DDX55-207ENST00000540763 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP20.61■□□□□ 0.89
DDX55-207ENST00000540763 EHD2Q9NZN4 543 aa20.61■□□□□ 0.89
DDX55-207ENST00000540763 UXTQ9UBK9 157 aaPredicted RBP20.61■□□□□ 0.89
DDX55-207ENST00000540763 DNAJC12Q9UKB3 198 aa20.61■□□□□ 0.89
DDX55-207ENST00000540763 NR2E1Q9Y466 385 aa20.61■□□□□ 0.89
DDX55-207ENST00000540763 ZFP37Q9Y6Q3 630 aaPredicted RBP20.61■□□□□ 0.89
DDX55-207ENST00000540763 ANAPC1Q9H1A4 1944 aa20.61■□□□□ 0.89
DDX55-207ENST00000540763 F8VP50 259 aa20.6■□□□□ 0.89
DDX55-207ENST00000540763 NOL4O94818 638 aa20.6■□□□□ 0.89
DDX55-207ENST00000540763 FAM200BP0CF97 657 aa20.6■□□□□ 0.89
DDX55-207ENST00000540763 UCHL3P15374 230 aa20.6■□□□□ 0.89
DDX55-207ENST00000540763 FSHRP23945 695 aa20.6■□□□□ 0.89
DDX55-207ENST00000540763 PLA2G5P39877 138 aa20.6■□□□□ 0.89
DDX55-207ENST00000540763 DDR2Q16832 855 aa20.6■□□□□ 0.89
DDX55-207ENST00000540763 SGO2Q562F6 1265 aa20.6■□□□□ 0.89
DDX55-207ENST00000540763 PRSS36Q5K4E3 855 aa20.6■□□□□ 0.89
DDX55-207ENST00000540763 PPP1R26Q5T8A7 1209 aaPredicted RBP20.6■□□□□ 0.89
DDX55-207ENST00000540763 CYP4A22Q5TCH4 519 aa20.6■□□□□ 0.89
DDX55-207ENST00000540763 GJB7Q6PEY0 223 aa20.6■□□□□ 0.89
DDX55-207ENST00000540763 MYRFLQ96LU7 910 aa20.6■□□□□ 0.89
DDX55-207ENST00000540763 NAA15Q9BXJ9 866 aaKnown RBP20.6■□□□□ 0.89
DDX55-207ENST00000540763 GANQ9H2C0 597 aa20.6■□□□□ 0.89
DDX55-207ENST00000540763 AP1G2O75843 785 aa20.59■□□□□ 0.89
DDX55-207ENST00000540763 SERPINC1P01008 464 aa20.59■□□□□ 0.89
DDX55-207ENST00000540763 HMGA1P17096 107 aaKnown RBP20.59■□□□□ 0.89
DDX55-207ENST00000540763 GPR15P49685 360 aa20.59■□□□□ 0.89
DDX55-207ENST00000540763 APBA1Q02410 837 aa20.59■□□□□ 0.89
DDX55-207ENST00000540763 ZP2Q05996 745 aa20.59■□□□□ 0.89
DDX55-207ENST00000540763 SYCP1Q15431 976 aa20.59■□□□□ 0.89
DDX55-207ENST00000540763 TAF12Q16514 161 aa20.59■□□□□ 0.89
DDX55-207ENST00000540763 MEA1Q16626 185 aa20.59■□□□□ 0.89
DDX55-207ENST00000540763 OTOP3Q7RTS5 596 aa20.59■□□□□ 0.89
DDX55-207ENST00000540763 FAM122AQ96E09 287 aa20.59■□□□□ 0.89
DDX55-207ENST00000540763 ANP32EQ9BTT0 268 aa20.59■□□□□ 0.89
DDX55-207ENST00000540763 TMEM30AQ9NV96 361 aa20.59■□□□□ 0.89
DDX55-207ENST00000540763 A0A1W2PQC6 194 aa20.58■□□□□ 0.89
DDX55-207ENST00000540763 SLC38A8A6NNN8 435 aa20.58■□□□□ 0.89
DDX55-207ENST00000540763 LOC730098B7Z3J9 87 aa20.58■□□□□ 0.89
DDX55-207ENST00000540763 RNF225M0QZC1 329 aaPredicted RBP20.58■□□□□ 0.89
DDX55-207ENST00000540763 KRT5P13647 590 aa20.58■□□□□ 0.89
DDX55-207ENST00000540763 NPR3P17342 541 aa20.58■□□□□ 0.89
DDX55-207ENST00000540763 ADORA2BP29275 332 aa20.58■□□□□ 0.89
DDX55-207ENST00000540763 CDC25CP30307 473 aa20.58■□□□□ 0.89
DDX55-207ENST00000540763 CDR1P51861 262 aa20.58■□□□□ 0.89
DDX55-207ENST00000540763 CACNA2D1P54289 1103 aa20.58■□□□□ 0.89
DDX55-207ENST00000540763 NTHL1P78549 312 aa20.58■□□□□ 0.89
DDX55-207ENST00000540763 FANCCQ00597 558 aa20.58■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms