RNA–Protein interactions for RNA: ENST00000538456.3

SMARCA4-206, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 3

Gene SMARCA4, Length 738 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-206ENST00000538456 WNT7BP56706 349 aa15.04■□□□□ -0
SMARCA4-206ENST00000538456 NR1H3Q13133 447 aa15.04■□□□□ -0
SMARCA4-206ENST00000538456 KIAA1211LQ6NV74 962 aa15.04■□□□□ -0
SMARCA4-206ENST00000538456 CCDC33Q8N5R6 958 aa15.04■□□□□ -0
SMARCA4-206ENST00000538456 MDGA1Q8NFP4 955 aa15.04■□□□□ -0
SMARCA4-206ENST00000538456 USP33Q8TEY7 942 aa15.04■□□□□ -0
SMARCA4-206ENST00000538456 PIGKQ92643 395 aa15.04■□□□□ -0
SMARCA4-206ENST00000538456 ACBD6Q9BR61 282 aa15.04■□□□□ -0
SMARCA4-206ENST00000538456 FAM213AQ9BRX8 229 aa15.04■□□□□ -0
SMARCA4-206ENST00000538456 ABCB6Q9NP58 842 aa15.04■□□□□ -0
SMARCA4-206ENST00000538456 WASF3Q9UPY6 502 aa15.04■□□□□ -0
SMARCA4-206ENST00000538456 KIF3AQ9Y496 699 aa15.04■□□□□ -0
SMARCA4-206ENST00000538456 STYXL1Q9Y6J8 313 aa15.04■□□□□ -0
SMARCA4-206ENST00000538456 PI4KAP42356 2102 aa15.04■□□□□ -0
SMARCA4-206ENST00000538456 CACNA1EQ15878 2313 aa15.03■□□□□ -0
SMARCA4-206ENST00000538456 H3BQV1 296 aa15.03■□□□□ -0
SMARCA4-206ENST00000538456 CDX4O14627 284 aaPredicted RBP15.03■□□□□ -0
SMARCA4-206ENST00000538456 SLC26A4O43511 780 aa15.03■□□□□ -0
SMARCA4-206ENST00000538456 HOXB3P14651 431 aaPredicted RBP15.03■□□□□ -0
SMARCA4-206ENST00000538456 ADSSP30520 456 aa15.03■□□□□ -0
SMARCA4-206ENST00000538456 IRX4P78413 519 aa15.03■□□□□ -0
SMARCA4-206ENST00000538456 MYL7Q01449 175 aa15.03■□□□□ -0
SMARCA4-206ENST00000538456 GRIN1Q05586 938 aa15.03■□□□□ -0
SMARCA4-206ENST00000538456 SCARA3Q6AZY7 606 aa15.03■□□□□ -0
SMARCA4-206ENST00000538456 C11orf74Q86VG3 221 aa15.03■□□□□ -0
SMARCA4-206ENST00000538456 SFR1Q86XK3 245 aa15.03■□□□□ -0
SMARCA4-206ENST00000538456 SPATA2LQ8IUW3 424 aaPredicted RBP15.03■□□□□ -0
SMARCA4-206ENST00000538456 C1orf127Q8N9H9 656 aa15.03■□□□□ -0
SMARCA4-206ENST00000538456 FSIP1Q8NA03 581 aa15.03■□□□□ -0
SMARCA4-206ENST00000538456 ZSWIM2Q8NEG5 633 aa15.03■□□□□ -0
SMARCA4-206ENST00000538456 DEFB124Q8NES8 71 aa15.03■□□□□ -0
SMARCA4-206ENST00000538456 LARP4BQ92615 738 aaKnown RBP15.03■□□□□ -0
SMARCA4-206ENST00000538456 SAAL1Q96ER3 474 aa15.03■□□□□ -0
SMARCA4-206ENST00000538456 MYRFLQ96LU7 910 aa15.03■□□□□ -0
SMARCA4-206ENST00000538456 PKMYT1Q99640 499 aa15.03■□□□□ -0
SMARCA4-206ENST00000538456 SCNM1Q9BWG6 230 aa15.03■□□□□ -0
SMARCA4-206ENST00000538456 GCNT4Q9P109 453 aa15.03■□□□□ -0
SMARCA4-206ENST00000538456 TNRC6BQ9UPQ9 1833 aaKnown RBP15.03■□□□□ -0
SMARCA4-206ENST00000538456 MYOFQ9NZM1 2061 aa15.02■□□□□ -0
SMARCA4-206ENST00000538456 K7EQS6 105 aa15.02■□□□□ -0
SMARCA4-206ENST00000538456 NFATC1O95644 943 aa15.02■□□□□ -0
SMARCA4-206ENST00000538456 KRT19P08727 400 aa15.02■□□□□ -0
SMARCA4-206ENST00000538456 CEACAM1P13688 526 aa15.02■□□□□ -0
SMARCA4-206ENST00000538456 HDCP19113 662 aa15.02■□□□□ -0
SMARCA4-206ENST00000538456 OPRD1P41143 372 aa15.02■□□□□ -0
SMARCA4-206ENST00000538456 ARMCX6Q7L4S7 300 aa15.02■□□□□ -0
SMARCA4-206ENST00000538456 DYMQ7RTS9 669 aa15.02■□□□□ -0
SMARCA4-206ENST00000538456 OSTM1Q86WC4 334 aa15.02■□□□□ -0
SMARCA4-206ENST00000538456 RASSF3Q86WH2 238 aa15.02■□□□□ -0
SMARCA4-206ENST00000538456 NT5DC4Q86YG4 428 aa15.02■□□□□ -0
SMARCA4-206ENST00000538456 ADGRF2Q8IZF7 708 aa15.02■□□□□ -0
SMARCA4-206ENST00000538456 TMEM86AQ8N2M4 240 aa15.02■□□□□ -0
SMARCA4-206ENST00000538456 KRI1Q8N9T8 703 aaKnown RBP15.02■□□□□ -0
SMARCA4-206ENST00000538456 KDF1Q8NAX2 398 aaPredicted RBP15.02■□□□□ -0
SMARCA4-206ENST00000538456 CCDC26Q8TAB7 109 aa15.02■□□□□ -0
SMARCA4-206ENST00000538456 NOC3LQ8WTT2 800 aaKnown RBP15.02■□□□□ -0
SMARCA4-206ENST00000538456 RLN3Q8WXF3 142 aa15.02■□□□□ -0
SMARCA4-206ENST00000538456 CNOT6LQ96LI5 555 aaKnown RBP15.02■□□□□ -0
SMARCA4-206ENST00000538456 KIF2CQ99661 725 aa15.02■□□□□ -0
SMARCA4-206ENST00000538456 TMEM121BQ9BXQ6 578 aaPredicted RBP15.02■□□□□ -0
SMARCA4-206ENST00000538456 MMP17Q9ULZ9 603 aa15.02■□□□□ -0
SMARCA4-206ENST00000538456 SNX9Q9Y5X1 595 aa15.02■□□□□ -0
SMARCA4-206ENST00000538456 SCAMP3O14828 347 aaKnown RBP15.01□□□□□ -0.01
SMARCA4-206ENST00000538456 CSRP1P21291 193 aaKnown RBP15.01□□□□□ -0.01
SMARCA4-206ENST00000538456 DDIT3P35638 169 aa15.01□□□□□ -0.01
SMARCA4-206ENST00000538456 MAPK8P45983 427 aa15.01□□□□□ -0.01
SMARCA4-206ENST00000538456 POU5F1Q01860 360 aaKnown RBP15.01□□□□□ -0.01
SMARCA4-206ENST00000538456 KCNA1Q09470 495 aa15.01□□□□□ -0.01
SMARCA4-206ENST00000538456 POSTNQ15063 836 aa15.01□□□□□ -0.01
SMARCA4-206ENST00000538456 CRY1Q16526 586 aa15.01□□□□□ -0.01
SMARCA4-206ENST00000538456 CFAP221Q4G0U5 840 aa15.01□□□□□ -0.01
SMARCA4-206ENST00000538456 TRIM61Q5EBN2 209 aa15.01□□□□□ -0.01
SMARCA4-206ENST00000538456 ZNF720Q7Z2F6 126 aa15.01□□□□□ -0.01
SMARCA4-206ENST00000538456 SFTPA1Q8IWL2 248 aa15.01□□□□□ -0.01
SMARCA4-206ENST00000538456 CSGALNACT2Q8N6G5 542 aa15.01□□□□□ -0.01
SMARCA4-206ENST00000538456 ZCCHC14Q8WYQ9 949 aaKnown RBP15.01□□□□□ -0.01
SMARCA4-206ENST00000538456 ST6GALNAC4Q9H4F1 302 aa15.01□□□□□ -0.01
SMARCA4-206ENST00000538456 RBAKQ9NYW8 714 aaPredicted RBP15.01□□□□□ -0.01
SMARCA4-206ENST00000538456 TBC1D7Q9P0N9 293 aa15.01□□□□□ -0.01
SMARCA4-206ENST00000538456 ARHGAP26Q9UNA1 814 aa15.01□□□□□ -0.01
SMARCA4-206ENST00000538456 ADAMTS9Q9P2N4 1935 aa15.01□□□□□ -0.01
SMARCA4-206ENST00000538456 DMXL2Q8TDJ6 3036 aa15.01□□□□□ -0.01
SMARCA4-206ENST00000538456 DSPP15924 2871 aaKnown RBP15□□□□□ -0.01
SMARCA4-206ENST00000538456 ATXN2Q99700 1313 aaKnown RBP15□□□□□ -0.01
SMARCA4-206ENST00000538456 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa15□□□□□ -0.01
SMARCA4-206ENST00000538456 GOLGA8IPA6NC78 632 aa15□□□□□ -0.01
SMARCA4-206ENST00000538456 GOLGA8JA6NMD2 632 aa15□□□□□ -0.01
SMARCA4-206ENST00000538456 LEFTY2O00292 366 aa15□□□□□ -0.01
SMARCA4-206ENST00000538456 MAP3K13O43283 966 aa15□□□□□ -0.01
SMARCA4-206ENST00000538456 ATP2C2O75185 946 aa15□□□□□ -0.01
SMARCA4-206ENST00000538456 CYP17A1P05093 508 aa15□□□□□ -0.01
SMARCA4-206ENST00000538456 HNRNPLP14866 589 aaKnown RBP eCLIP15□□□□□ -0.01
SMARCA4-206ENST00000538456 GJB2P29033 226 aa15□□□□□ -0.01
SMARCA4-206ENST00000538456 PCSK1P29120 753 aa15□□□□□ -0.01
SMARCA4-206ENST00000538456 PSMC1P62191 440 aaKnown RBP15□□□□□ -0.01
SMARCA4-206ENST00000538456 ZXDBP98169 803 aa15□□□□□ -0.01
SMARCA4-206ENST00000538456 GAB4Q2WGN9 574 aa15□□□□□ -0.01
SMARCA4-206ENST00000538456 TMEM92Q6UXU6 159 aa15□□□□□ -0.01
SMARCA4-206ENST00000538456 FILIP1Q7Z7B0 1213 aa15□□□□□ -0.01
SMARCA4-206ENST00000538456 BRSK2Q8IWQ3 736 aa15□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 60 ms