RNA–Protein interactions for RNA: ENST00000523088.5

HDAC3-216, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 699 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-216ENST00000523088 GMCL1P1Q8NEA9 526 aa7.91□□□□□ -1.14
HDAC3-216ENST00000523088 LILRB4Q8NHJ6 448 aa7.91□□□□□ -1.14
HDAC3-216ENST00000523088 SLC26A7Q8TE54 656 aa7.91□□□□□ -1.14
HDAC3-216ENST00000523088 ADAMTS19Q8TE59 1207 aa7.91□□□□□ -1.14
HDAC3-216ENST00000523088 P3H4Q92791 437 aa7.91□□□□□ -1.14
HDAC3-216ENST00000523088 RMDN1Q96DB5 314 aa7.91□□□□□ -1.14
HDAC3-216ENST00000523088 PPP1R10Q96QC0 940 aaKnown RBP7.91□□□□□ -1.14
HDAC3-216ENST00000523088 ERP44Q9BS26 406 aa7.91□□□□□ -1.14
HDAC3-216ENST00000523088 KRT23Q9C075 422 aa7.91□□□□□ -1.14
HDAC3-216ENST00000523088 GMIPQ9P107 970 aa7.91□□□□□ -1.14
HDAC3-216ENST00000523088 NFKBIL1Q9UBC1 381 aaPredicted RBP7.91□□□□□ -1.14
HDAC3-216ENST00000523088 FBXO40Q9UH90 709 aa7.91□□□□□ -1.14
HDAC3-216ENST00000523088 FEM1BQ9UK73 627 aa7.91□□□□□ -1.14
HDAC3-216ENST00000523088 GPC6Q9Y625 555 aaPredicted RBP7.91□□□□□ -1.14
HDAC3-216ENST00000523088 SALL3Q9BXA9 1300 aa7.9□□□□□ -1.14
HDAC3-216ENST00000523088 FAM221BA6H8Z2 402 aa7.9□□□□□ -1.14
HDAC3-216ENST00000523088 SRRM3A6NNA2 597 aaPredicted RBP7.9□□□□□ -1.14
HDAC3-216ENST00000523088 C16orf96A6NNT2 1141 aa7.9□□□□□ -1.14
HDAC3-216ENST00000523088 KBTBD13C9JR72 458 aa7.9□□□□□ -1.14
HDAC3-216ENST00000523088 F5H6K3 240 aa7.9□□□□□ -1.14
HDAC3-216ENST00000523088 HIP1O00291 1037 aa7.9□□□□□ -1.14
HDAC3-216ENST00000523088 SEPT4O43236 478 aa7.9□□□□□ -1.14
HDAC3-216ENST00000523088 TSPAN3O60637 253 aa7.9□□□□□ -1.14
HDAC3-216ENST00000523088 SOCS5O75159 536 aa7.9□□□□□ -1.14
HDAC3-216ENST00000523088 DGKIO75912 1065 aa7.9□□□□□ -1.14
HDAC3-216ENST00000523088 PLGP00747 810 aaPredicted RBP7.9□□□□□ -1.14
HDAC3-216ENST00000523088 ALBP02768 609 aa7.9□□□□□ -1.14
HDAC3-216ENST00000523088 CLTAP09496 248 aa7.9□□□□□ -1.14
HDAC3-216ENST00000523088 FGRP09769 529 aa7.9□□□□□ -1.14
HDAC3-216ENST00000523088 LTA4HP09960 611 aaKnown RBP7.9□□□□□ -1.14
HDAC3-216ENST00000523088 ATF6P18850 670 aa7.9□□□□□ -1.14
HDAC3-216ENST00000523088 POLR2CP19387 275 aaPredicted RBP7.9□□□□□ -1.14
HDAC3-216ENST00000523088 NDUFV2P19404 249 aa7.9□□□□□ -1.14
HDAC3-216ENST00000523088 CDH3P22223 829 aa7.9□□□□□ -1.14
HDAC3-216ENST00000523088 XPAP23025 273 aaPredicted RBP7.9□□□□□ -1.14
HDAC3-216ENST00000523088 KRT6CP48668 564 aa7.9□□□□□ -1.14
HDAC3-216ENST00000523088 NEK3P51956 506 aa7.9□□□□□ -1.14
HDAC3-216ENST00000523088 SLC12A2P55011 1212 aa7.9□□□□□ -1.14
HDAC3-216ENST00000523088 UBE2IP63279 158 aaKnown RBP7.9□□□□□ -1.14
HDAC3-216ENST00000523088 MXRA7P84157 204 aa7.9□□□□□ -1.14
HDAC3-216ENST00000523088 KLRC3Q07444 240 aa7.9□□□□□ -1.14
HDAC3-216ENST00000523088 SPAG1Q07617 926 aa7.9□□□□□ -1.14
HDAC3-216ENST00000523088 PPARAQ07869 468 aa7.9□□□□□ -1.14
HDAC3-216ENST00000523088 ACTN3Q08043 901 aaPredicted RBP7.9□□□□□ -1.14
HDAC3-216ENST00000523088 GOLGA8FQ08AF8 430 aa7.9□□□□□ -1.14
HDAC3-216ENST00000523088 VAC14Q08AM6 782 aa7.9□□□□□ -1.14
HDAC3-216ENST00000523088 GOLGA8DPQ0D2H9 430 aa7.9□□□□□ -1.14
HDAC3-216ENST00000523088 SMARCB1Q12824 385 aa7.9□□□□□ -1.14
HDAC3-216ENST00000523088 TRPC3Q13507 836 aa7.9□□□□□ -1.14
HDAC3-216ENST00000523088 NCF4Q15080 339 aa7.9□□□□□ -1.14
HDAC3-216ENST00000523088 PTPAQ15257 358 aa7.9□□□□□ -1.14
HDAC3-216ENST00000523088 RGS21Q2M5E4 152 aa7.9□□□□□ -1.14
HDAC3-216ENST00000523088 AARDQ4LEZ3 155 aa7.9□□□□□ -1.14
HDAC3-216ENST00000523088 XKR3Q5GH77 459 aa7.9□□□□□ -1.14
HDAC3-216ENST00000523088 DENND2CQ68D51 928 aa7.9□□□□□ -1.14
HDAC3-216ENST00000523088 PDPK2PQ6A1A2 396 aa7.9□□□□□ -1.14
HDAC3-216ENST00000523088 IL31Q6EBC2 164 aa7.9□□□□□ -1.14
HDAC3-216ENST00000523088 FAM160B2Q86V87 743 aa7.9□□□□□ -1.14
HDAC3-216ENST00000523088 GALNT13Q8IUC8 556 aa7.9□□□□□ -1.14
HDAC3-216ENST00000523088 CDH26Q8IXH8 852 aa7.9□□□□□ -1.14
HDAC3-216ENST00000523088 SIX5Q8N196 739 aa7.9□□□□□ -1.14
HDAC3-216ENST00000523088 CBARPQ8N350 705 aaPredicted RBP7.9□□□□□ -1.14
HDAC3-216ENST00000523088 ATAD1Q8NBU5 361 aa7.9□□□□□ -1.14
HDAC3-216ENST00000523088 NEDD1Q8NHV4 660 aa7.9□□□□□ -1.14
HDAC3-216ENST00000523088 RUFY2Q8WXA3 655 aa7.9□□□□□ -1.14
HDAC3-216ENST00000523088 RAPGEF5Q92565 580 aa7.9□□□□□ -1.14
HDAC3-216ENST00000523088 CIDECQ96AQ7 238 aaPredicted RBP7.9□□□□□ -1.14
HDAC3-216ENST00000523088 ATG4CQ96DT6 458 aa7.9□□□□□ -1.14
HDAC3-216ENST00000523088 MMP19Q99542 508 aa7.9□□□□□ -1.14
HDAC3-216ENST00000523088 DHRS9Q9BPW9 319 aa7.9□□□□□ -1.14
HDAC3-216ENST00000523088 XKR8Q9H6D3 395 aa7.9□□□□□ -1.14
HDAC3-216ENST00000523088 ARFGAP3Q9NP61 516 aa7.9□□□□□ -1.14
HDAC3-216ENST00000523088 PLCB1Q9NQ66 1216 aa7.9□□□□□ -1.14
HDAC3-216ENST00000523088 WASH6PQ9NQA3 447 aa7.9□□□□□ -1.14
HDAC3-216ENST00000523088 HPS4Q9NQG7 708 aa7.9□□□□□ -1.14
HDAC3-216ENST00000523088 SEC63Q9UGP8 760 aaKnown RBP7.9□□□□□ -1.14
HDAC3-216ENST00000523088 CHORDC1Q9UHD1 332 aaPredicted RBP7.9□□□□□ -1.14
HDAC3-216ENST00000523088 ADGRE2Q9UHX3 823 aa7.9□□□□□ -1.14
HDAC3-216ENST00000523088 COLQQ9Y215 455 aaPredicted RBP7.9□□□□□ -1.14
HDAC3-216ENST00000523088 TSC22D4Q9Y3Q8 395 aa7.9□□□□□ -1.14
HDAC3-216ENST00000523088 STON1Q9Y6Q2 735 aa7.9□□□□□ -1.14
HDAC3-216ENST00000523088 SYNGAP1Q96PV0 1343 aa7.89□□□□□ -1.15
HDAC3-216ENST00000523088 IGKV6D-41A0A0C4DH26 115 aa7.89□□□□□ -1.15
HDAC3-216ENST00000523088 PNMA6FA0A0J9YX94 578 aa7.89□□□□□ -1.15
HDAC3-216ENST00000523088 A0A1B0GVG6 124 aa7.89□□□□□ -1.15
HDAC3-216ENST00000523088 CTAGE9A4FU28 777 aa7.89□□□□□ -1.15
HDAC3-216ENST00000523088 SH3D21A4FU49 640 aa7.89□□□□□ -1.15
HDAC3-216ENST00000523088 PLA2G6O60733 806 aa7.89□□□□□ -1.15
HDAC3-216ENST00000523088 CRTAPO75718 401 aaPredicted RBP7.89□□□□□ -1.15
HDAC3-216ENST00000523088 NDUFB10O96000 172 aa7.89□□□□□ -1.15
HDAC3-216ENST00000523088 PDHA1P08559 390 aa7.89□□□□□ -1.15
HDAC3-216ENST00000523088 CHRNB1P11230 501 aa7.89□□□□□ -1.15
HDAC3-216ENST00000523088 CYBAP13498 195 aa7.89□□□□□ -1.15
HDAC3-216ENST00000523088 FUT4P22083 530 aa7.89□□□□□ -1.15
HDAC3-216ENST00000523088 BMP8BP34820 402 aa7.89□□□□□ -1.15
HDAC3-216ENST00000523088 LONP1P36776 959 aaKnown RBP7.89□□□□□ -1.15
HDAC3-216ENST00000523088 PPARGP37231 505 aaPredicted RBP7.89□□□□□ -1.15
HDAC3-216ENST00000523088 STAT2P52630 851 aa7.89□□□□□ -1.15
HDAC3-216ENST00000523088 PDE1AP54750 535 aa7.89□□□□□ -1.15
HDAC3-216ENST00000523088 NOP14P78316 857 aaKnown RBP7.89□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 659.8 ms