RNA–Protein interactions for RNA: ENST00000505659.1

HMGB1P29-201, Transcript of high mobility group box 1 pseudogene 29, humanhuman

BASIC

Gene HMGB1P29, Length 499 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P29-201ENST00000505659 ALDH9A1P49189 494 aa4.26□□□□□ -1.73
HMGB1P29-201ENST00000505659 PDE1AP54750 535 aa4.26□□□□□ -1.73
HMGB1P29-201ENST00000505659 SOX10P56693 466 aa4.26□□□□□ -1.73
HMGB1P29-201ENST00000505659 KRT17Q04695 432 aa4.26□□□□□ -1.73
HMGB1P29-201ENST00000505659 SRSF4Q08170 494 aaKnown RBP4.26□□□□□ -1.73
HMGB1P29-201ENST00000505659 SLC13A2Q13183 592 aa4.26□□□□□ -1.73
HMGB1P29-201ENST00000505659 E2F2Q14209 437 aa4.26□□□□□ -1.73
HMGB1P29-201ENST00000505659 LY6KQ17RY6 165 aa4.26□□□□□ -1.73
HMGB1P29-201ENST00000505659 DCAF12L1Q5VU92 463 aa4.26□□□□□ -1.73
HMGB1P29-201ENST00000505659 LMBRD2Q68DH5 695 aaPredicted RBP4.26□□□□□ -1.73
HMGB1P29-201ENST00000505659 APOA5Q6Q788 366 aa4.26□□□□□ -1.73
HMGB1P29-201ENST00000505659 NAPRTQ6XQN6 538 aa4.26□□□□□ -1.73
HMGB1P29-201ENST00000505659 DPY19L3Q6ZPD9 716 aa4.26□□□□□ -1.73
HMGB1P29-201ENST00000505659 MAEAQ7L5Y9 396 aa4.26□□□□□ -1.73
HMGB1P29-201ENST00000505659 SLC15A3Q8IY34 581 aa4.26□□□□□ -1.73
HMGB1P29-201ENST00000505659 KIAA0319LQ8IZA0 1049 aa4.26□□□□□ -1.73
HMGB1P29-201ENST00000505659 LRRC71Q8N4P6 559 aa4.26□□□□□ -1.73
HMGB1P29-201ENST00000505659 MAGEB6Q8N7X4 407 aa4.26□□□□□ -1.73
HMGB1P29-201ENST00000505659 OR6B3Q8NGW1 331 aa4.26□□□□□ -1.73
HMGB1P29-201ENST00000505659 HASPINQ8TF76 798 aa4.26□□□□□ -1.73
HMGB1P29-201ENST00000505659 TSR2Q969E8 191 aaKnown RBP4.26□□□□□ -1.73
HMGB1P29-201ENST00000505659 MOGAT1Q96PD6 335 aa4.26□□□□□ -1.73
HMGB1P29-201ENST00000505659 DPH1Q9BZG8 443 aa4.26□□□□□ -1.73
HMGB1P29-201ENST00000505659 TMEM60Q9H2L4 133 aa4.26□□□□□ -1.73
HMGB1P29-201ENST00000505659 GLOD4Q9HC38 313 aa4.26□□□□□ -1.73
HMGB1P29-201ENST00000505659 DUSP22Q9NRW4 184 aa4.26□□□□□ -1.73
HMGB1P29-201ENST00000505659 CPNE7Q9UBL6 633 aa4.26□□□□□ -1.73
HMGB1P29-201ENST00000505659 SNX14Q9Y5W7 946 aa4.26□□□□□ -1.73
HMGB1P29-201ENST00000505659 CAPN8A6NHC0 703 aa4.25□□□□□ -1.73
HMGB1P29-201ENST00000505659 SMIM22K7EJ46 135 aa4.25□□□□□ -1.73
HMGB1P29-201ENST00000505659 MYO1FO00160 1098 aa4.25□□□□□ -1.73
HMGB1P29-201ENST00000505659 PDE8BO95263 885 aa4.25□□□□□ -1.73
HMGB1P29-201ENST00000505659 THP07101 528 aa4.25□□□□□ -1.73
HMGB1P29-201ENST00000505659 FAM163BP0C2L3 166 aa4.25□□□□□ -1.73
HMGB1P29-201ENST00000505659 EN2P19622 333 aaPredicted RBP4.25□□□□□ -1.73
HMGB1P29-201ENST00000505659 KCNA3P22001 575 aa4.25□□□□□ -1.73
HMGB1P29-201ENST00000505659 ABCG1P45844 678 aa4.25□□□□□ -1.73
HMGB1P29-201ENST00000505659 PDE6CP51160 858 aa4.25□□□□□ -1.73
HMGB1P29-201ENST00000505659 EEFSECP57772 596 aaKnown RBP4.25□□□□□ -1.73
HMGB1P29-201ENST00000505659 CYP4F2P78329 520 aa4.25□□□□□ -1.73
HMGB1P29-201ENST00000505659 GPSM2P81274 684 aa4.25□□□□□ -1.73
HMGB1P29-201ENST00000505659 MLC1Q15049 377 aa4.25□□□□□ -1.73
HMGB1P29-201ENST00000505659 CNN3Q15417 329 aaKnown RBP4.25□□□□□ -1.73
HMGB1P29-201ENST00000505659 PTCHD3Q3KNS1 767 aa4.25□□□□□ -1.73
HMGB1P29-201ENST00000505659 ARHGAP29Q52LW3 1261 aa4.25□□□□□ -1.73
HMGB1P29-201ENST00000505659 PLA1AQ53H76 456 aa4.25□□□□□ -1.73
HMGB1P29-201ENST00000505659 ZDHHC24Q6UX98 284 aa4.25□□□□□ -1.73
HMGB1P29-201ENST00000505659 GAS2L3Q86XJ1 694 aa4.25□□□□□ -1.73
HMGB1P29-201ENST00000505659 TCEAL8Q8IYN2 117 aa4.25□□□□□ -1.73
HMGB1P29-201ENST00000505659 OR56A3Q8NH54 315 aa4.25□□□□□ -1.73
HMGB1P29-201ENST00000505659 BPIFB1Q8TDL5 484 aa4.25□□□□□ -1.73
HMGB1P29-201ENST00000505659 XAGE5Q8WWM1 108 aa4.25□□□□□ -1.73
HMGB1P29-201ENST00000505659 CFAP69A5D8W1 941 aa4.24□□□□□ -1.73
HMGB1P29-201ENST00000505659 LINC01548A6NM66 108 aa4.24□□□□□ -1.73
HMGB1P29-201ENST00000505659 FAM227AF5H4B4 570 aa4.24□□□□□ -1.73
HMGB1P29-201ENST00000505659 QSOX1O00391 747 aa4.24□□□□□ -1.73
HMGB1P29-201ENST00000505659 TSPAN6O43657 245 aa4.24□□□□□ -1.73
HMGB1P29-201ENST00000505659 TBC1D4O60343 1298 aa4.24□□□□□ -1.73
HMGB1P29-201ENST00000505659 PRKCGP05129 697 aa4.24□□□□□ -1.73
HMGB1P29-201ENST00000505659 CTGFP29279 349 aa4.24□□□□□ -1.73
HMGB1P29-201ENST00000505659 LRPAP1P30533 357 aa4.24□□□□□ -1.73
HMGB1P29-201ENST00000505659 DGKEP52429 567 aa4.24□□□□□ -1.73
HMGB1P29-201ENST00000505659 SUMO3P55854 103 aaPredicted RBP4.24□□□□□ -1.73
HMGB1P29-201ENST00000505659 WNT3P56703 355 aa4.24□□□□□ -1.73
HMGB1P29-201ENST00000505659 GRM3Q14832 879 aa4.24□□□□□ -1.73
HMGB1P29-201ENST00000505659 MINDY4Q4G0A6 757 aa4.24□□□□□ -1.73
HMGB1P29-201ENST00000505659 AARS2Q5JTZ9 985 aaKnown RBP4.24□□□□□ -1.73
HMGB1P29-201ENST00000505659 PCID2Q5JVF3 399 aa4.24□□□□□ -1.73
HMGB1P29-201ENST00000505659 NXNQ6DKJ4 435 aa4.24□□□□□ -1.73
HMGB1P29-201ENST00000505659 CEP85Q6P2H3 762 aa4.24□□□□□ -1.73
HMGB1P29-201ENST00000505659 ANKRD16Q6P6B7 361 aa4.24□□□□□ -1.73
HMGB1P29-201ENST00000505659 ZNF66Q6ZN08 573 aa4.24□□□□□ -1.73
HMGB1P29-201ENST00000505659 SLC29A4Q7RTT9 530 aa4.24□□□□□ -1.73
HMGB1P29-201ENST00000505659 MICU3Q86XE3 530 aa4.24□□□□□ -1.73
HMGB1P29-201ENST00000505659 FANCBQ8NB91 859 aa4.24□□□□□ -1.73
HMGB1P29-201ENST00000505659 OSCP1Q8WVF1 389 aa4.24□□□□□ -1.73
HMGB1P29-201ENST00000505659 ANKS1AQ92625 1134 aa4.24□□□□□ -1.73
HMGB1P29-201ENST00000505659 GBA2Q9HCG7 927 aaPredicted RBP4.24□□□□□ -1.73
HMGB1P29-201ENST00000505659 L1RE1Q9UN81 338 aa4.24□□□□□ -1.73
HMGB1P29-201ENST00000505659 ADAMTS5Q9UNA0 930 aa4.24□□□□□ -1.73
HMGB1P29-201ENST00000505659 DNAJC9-AS1A6NH13 148 aa4.23□□□□□ -1.73
HMGB1P29-201ENST00000505659 VSTM5A8MXK1 200 aa4.23□□□□□ -1.73
HMGB1P29-201ENST00000505659 TISP43B9A030 160 aa4.23□□□□□ -1.73
HMGB1P29-201ENST00000505659 CYP2C9P11712 490 aa4.23□□□□□ -1.73
HMGB1P29-201ENST00000505659 FPR3P25089 353 aa4.23□□□□□ -1.73
HMGB1P29-201ENST00000505659 LMO1P25800 156 aa4.23□□□□□ -1.73
HMGB1P29-201ENST00000505659 PRKAG1P54619 331 aa4.23□□□□□ -1.73
HMGB1P29-201ENST00000505659 CYP1B1Q16678 543 aa4.23□□□□□ -1.73
HMGB1P29-201ENST00000505659 PROSER3Q2NL68 480 aa4.23□□□□□ -1.73
HMGB1P29-201ENST00000505659 MGAT5BQ3V5L5 792 aa4.23□□□□□ -1.73
HMGB1P29-201ENST00000505659 C3orf38Q5JPI3 329 aa4.23□□□□□ -1.73
HMGB1P29-201ENST00000505659 SLC9A4Q6AI14 798 aa4.23□□□□□ -1.73
HMGB1P29-201ENST00000505659 SUMO4Q6EEV6 95 aa4.23□□□□□ -1.73
HMGB1P29-201ENST00000505659 Q6ZWC4 215 aa4.23□□□□□ -1.73
HMGB1P29-201ENST00000505659 PTF1AQ7RTS3 328 aa4.23□□□□□ -1.73
HMGB1P29-201ENST00000505659 KCTD20Q7Z5Y7 419 aa4.23□□□□□ -1.73
HMGB1P29-201ENST00000505659 ABRAQ8N0Z2 381 aa4.23□□□□□ -1.73
HMGB1P29-201ENST00000505659 FAM156AQ8NDB6 213 aa4.23□□□□□ -1.73
HMGB1P29-201ENST00000505659 SOCS4Q8WXH5 440 aa4.23□□□□□ -1.73
HMGB1P29-201ENST00000505659 TBC1D5Q92609 795 aa4.23□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms