RNA–Protein interactions for RNA: ENST00000489728.1

CPSF7-212, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 4

Gene CPSF7, Length 488 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-212ENST00000489728 GRIK1P39086 918 aa11.76□□□□□ -0.53
CPSF7-212ENST00000489728 PPP3CCP48454 512 aa11.76□□□□□ -0.53
CPSF7-212ENST00000489728 RAD23BP54727 409 aa11.76□□□□□ -0.53
CPSF7-212ENST00000489728 MFAP3P55082 362 aa11.76□□□□□ -0.53
CPSF7-212ENST00000489728 NTHL1P78549 312 aa11.76□□□□□ -0.53
CPSF7-212ENST00000489728 NCAPHQ15003 741 aa11.76□□□□□ -0.53
CPSF7-212ENST00000489728 STILQ15468 1287 aa11.76□□□□□ -0.53
CPSF7-212ENST00000489728 CCDC142Q17RM4 750 aa11.76□□□□□ -0.53
CPSF7-212ENST00000489728 SLC5A9Q2M3M2 681 aa11.76□□□□□ -0.53
CPSF7-212ENST00000489728 ARHGAP15Q53QZ3 475 aa11.76□□□□□ -0.53
CPSF7-212ENST00000489728 FKBP15Q5T1M5 1219 aa11.76□□□□□ -0.53
CPSF7-212ENST00000489728 ARHGAP17Q68EM7 881 aa11.76□□□□□ -0.53
CPSF7-212ENST00000489728 MTSS1LQ765P7 747 aa11.76□□□□□ -0.53
CPSF7-212ENST00000489728 SCN4BQ8IWT1 228 aa11.76□□□□□ -0.53
CPSF7-212ENST00000489728 AOPEPQ8N6M6 819 aa11.76□□□□□ -0.53
CPSF7-212ENST00000489728 FGF13Q92913 245 aa11.76□□□□□ -0.53
CPSF7-212ENST00000489728 TWNKQ96RR1 684 aa11.76□□□□□ -0.53
CPSF7-212ENST00000489728 MYADMQ96S97 322 aa11.76□□□□□ -0.53
CPSF7-212ENST00000489728 LPIN3Q9BQK8 851 aa11.76□□□□□ -0.53
CPSF7-212ENST00000489728 TTLL2Q9BWV7 592 aa11.76□□□□□ -0.53
CPSF7-212ENST00000489728 ZNF518BQ9C0D4 1074 aa11.76□□□□□ -0.53
CPSF7-212ENST00000489728 UTP3Q9NQZ2 479 aaKnown RBP eCLIP11.76□□□□□ -0.53
CPSF7-212ENST00000489728 CNTN6Q9UQ52 1028 aa11.76□□□□□ -0.53
CPSF7-212ENST00000489728 PATJQ8NI35 1801 aa11.76□□□□□ -0.53
CPSF7-212ENST00000489728 SLC38A8A6NNN8 435 aa11.75□□□□□ -0.53
CPSF7-212ENST00000489728 ANHXE9PGG2 379 aa11.75□□□□□ -0.53
CPSF7-212ENST00000489728 F8VP50 259 aa11.75□□□□□ -0.53
CPSF7-212ENST00000489728 AP1G2O75843 785 aa11.75□□□□□ -0.53
CPSF7-212ENST00000489728 RTN3O95197 1032 aaPredicted RBP11.75□□□□□ -0.53
CPSF7-212ENST00000489728 MYL4P12829 197 aa11.75□□□□□ -0.53
CPSF7-212ENST00000489728 PFKLP17858 780 aa11.75□□□□□ -0.53
CPSF7-212ENST00000489728 ACO1P21399 889 aaKnown RBP11.75□□□□□ -0.53
CPSF7-212ENST00000489728 PON1P27169 355 aa11.75□□□□□ -0.53
CPSF7-212ENST00000489728 ZNF132P52740 706 aa11.75□□□□□ -0.53
CPSF7-212ENST00000489728 TPM4P67936 248 aa11.75□□□□□ -0.53
CPSF7-212ENST00000489728 LRMPQ12912 555 aa11.75□□□□□ -0.53
CPSF7-212ENST00000489728 KRT31Q15323 416 aa11.75□□□□□ -0.53
CPSF7-212ENST00000489728 NFKBIBQ15653 356 aa11.75□□□□□ -0.53
CPSF7-212ENST00000489728 MEA1Q16626 185 aa11.75□□□□□ -0.53
CPSF7-212ENST00000489728 DDR2Q16832 855 aa11.75□□□□□ -0.53
CPSF7-212ENST00000489728 PHLDB3Q6NSJ2 640 aa11.75□□□□□ -0.53
CPSF7-212ENST00000489728 DENND5BQ6ZUT9 1274 aa11.75□□□□□ -0.53
CPSF7-212ENST00000489728 PAQR9Q6ZVX9 377 aa11.75□□□□□ -0.53
CPSF7-212ENST00000489728 RNF135Q8IUD6 432 aa11.75□□□□□ -0.53
CPSF7-212ENST00000489728 ARHGEF19Q8IW93 802 aa11.75□□□□□ -0.53
CPSF7-212ENST00000489728 SLC4A11Q8NBS3 891 aa11.75□□□□□ -0.53
CPSF7-212ENST00000489728 ITFG1Q8TB96 612 aa11.75□□□□□ -0.53
CPSF7-212ENST00000489728 SLC2A14Q8TDB8 520 aa11.75□□□□□ -0.53
CPSF7-212ENST00000489728 OVCA2Q8WZ82 227 aa11.75□□□□□ -0.53
CPSF7-212ENST00000489728 CYFIP2Q96F07 1278 aa11.75□□□□□ -0.53
CPSF7-212ENST00000489728 NECAB3Q96P71 396 aaPredicted RBP11.75□□□□□ -0.53
CPSF7-212ENST00000489728 MED10Q9BTT4 135 aa11.75□□□□□ -0.53
CPSF7-212ENST00000489728 UBXN6Q9BZV1 441 aa11.75□□□□□ -0.53
CPSF7-212ENST00000489728 TRPV4Q9HBA0 871 aa11.75□□□□□ -0.53
CPSF7-212ENST00000489728 IL21Q9HBE4 155 aa11.75□□□□□ -0.53
CPSF7-212ENST00000489728 PLCB1Q9NQ66 1216 aa11.75□□□□□ -0.53
CPSF7-212ENST00000489728 KRT82Q9NSB4 513 aa11.75□□□□□ -0.53
CPSF7-212ENST00000489728 GREB1Q4ZG55 1949 aa11.75□□□□□ -0.53
CPSF7-212ENST00000489728 BDP1A6H8Y1 2624 aa11.75□□□□□ -0.53
CPSF7-212ENST00000489728 NCANO14594 1321 aa11.75□□□□□ -0.53
CPSF7-212ENST00000489728 MUC3AQ02505 3323 aa11.74□□□□□ -0.53
CPSF7-212ENST00000489728 LGALS16A8MUM7 142 aa11.74□□□□□ -0.53
CPSF7-212ENST00000489728 BECN2A8MW95 431 aa11.74□□□□□ -0.53
CPSF7-212ENST00000489728 CLDN5O00501 218 aa11.74□□□□□ -0.53
CPSF7-212ENST00000489728 MOSPD3O75425 235 aa11.74□□□□□ -0.53
CPSF7-212ENST00000489728 VDRP11473 427 aa11.74□□□□□ -0.53
CPSF7-212ENST00000489728 ALADP13716 330 aa11.74□□□□□ -0.53
CPSF7-212ENST00000489728 CCDC130P13994 396 aa11.74□□□□□ -0.53
CPSF7-212ENST00000489728 NPR3P17342 541 aa11.74□□□□□ -0.53
CPSF7-212ENST00000489728 CEBPBP17676 345 aa11.74□□□□□ -0.53
CPSF7-212ENST00000489728 SLC9A1P19634 815 aa11.74□□□□□ -0.53
CPSF7-212ENST00000489728 GABRR2P28476 465 aa11.74□□□□□ -0.53
CPSF7-212ENST00000489728 CCR2P41597 374 aa11.74□□□□□ -0.53
CPSF7-212ENST00000489728 GPR15P49685 360 aa11.74□□□□□ -0.53
CPSF7-212ENST00000489728 PDE6CP51160 858 aa11.74□□□□□ -0.53
CPSF7-212ENST00000489728 SLC8A3P57103 927 aa11.74□□□□□ -0.53
CPSF7-212ENST00000489728 HTR4Q13639 388 aa11.74□□□□□ -0.53
CPSF7-212ENST00000489728 PTPN21Q16825 1174 aa11.74□□□□□ -0.53
CPSF7-212ENST00000489728 SGO2Q562F6 1265 aa11.74□□□□□ -0.53
CPSF7-212ENST00000489728 HSP90AA4PQ58FG1 418 aa11.74□□□□□ -0.53
CPSF7-212ENST00000489728 TMEM270Q6UE05 265 aa11.74□□□□□ -0.53
CPSF7-212ENST00000489728 GAREM2Q75VX8 874 aa11.74□□□□□ -0.53
CPSF7-212ENST00000489728 DHX40Q8IX18 779 aaKnown RBP11.74□□□□□ -0.53
CPSF7-212ENST00000489728 UBALD2Q8IYN6 164 aa11.74□□□□□ -0.53
CPSF7-212ENST00000489728 HS6ST3Q8IZP7 471 aa11.74□□□□□ -0.53
CPSF7-212ENST00000489728 NUP93Q8N1F7 819 aa11.74□□□□□ -0.53
CPSF7-212ENST00000489728 C12orf29Q8N999 325 aa11.74□□□□□ -0.53
CPSF7-212ENST00000489728 PDZD8Q8NEN9 1154 aa11.74□□□□□ -0.53
CPSF7-212ENST00000489728 SHKBP1Q8TBC3 707 aa11.74□□□□□ -0.53
CPSF7-212ENST00000489728 GIPC2Q8TF65 315 aa11.74□□□□□ -0.53
CPSF7-212ENST00000489728 E2F7Q96AV8 911 aa11.74□□□□□ -0.53
CPSF7-212ENST00000489728 HEXIM2Q96MH2 286 aaKnown RBP11.74□□□□□ -0.53
CPSF7-212ENST00000489728 KREMEN1Q96MU8 473 aa11.74□□□□□ -0.53
CPSF7-212ENST00000489728 CRACR2AQ9BSW2 395 aa11.74□□□□□ -0.53
CPSF7-212ENST00000489728 HSD3B7Q9H2F3 369 aa11.74□□□□□ -0.53
CPSF7-212ENST00000489728 ZNF334Q9HCZ1 680 aaPredicted RBP11.74□□□□□ -0.53
CPSF7-212ENST00000489728 UBE2TQ9NPD8 197 aaPredicted RBP11.74□□□□□ -0.53
CPSF7-212ENST00000489728 CD320Q9NPF0 282 aa11.74□□□□□ -0.53
CPSF7-212ENST00000489728 FAM49BQ9NUQ9 324 aa11.74□□□□□ -0.53
CPSF7-212ENST00000489728 TAB2Q9NYJ8 693 aa11.74□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms