RNA–Protein interactions for RNA: ENST00000487266.1

GABPA-203, Transcript of GA binding protein transcription factor subunit alpha, humanhuman

TSL 2

Gene GABPA, Length 780 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPA-203ENST00000487266 SPATA20Q8TB22 786 aa16.91■□□□□ 0.3
GABPA-203ENST00000487266 RIN3Q8TB24 985 aa16.91■□□□□ 0.3
GABPA-203ENST00000487266 ATOH1Q92858 354 aaPredicted RBP16.91■□□□□ 0.3
GABPA-203ENST00000487266 DNASE1L2Q92874 299 aa16.91■□□□□ 0.3
GABPA-203ENST00000487266 TIGD1Q96MW7 591 aa16.91■□□□□ 0.3
GABPA-203ENST00000487266 GSDMAQ96QA5 445 aa16.91■□□□□ 0.3
GABPA-203ENST00000487266 B3GNT5Q9BYG0 378 aa16.91■□□□□ 0.3
GABPA-203ENST00000487266 APOBEC3GQ9HC16 384 aaKnown RBP16.91■□□□□ 0.3
GABPA-203ENST00000487266 LTB4R2Q9NPC1 389 aa16.91■□□□□ 0.3
GABPA-203ENST00000487266 RMND1Q9NWS8 449 aa16.91■□□□□ 0.3
GABPA-203ENST00000487266 MAN1B1Q9UKM7 699 aa16.91■□□□□ 0.3
GABPA-203ENST00000487266 CIZ1Q9ULV3 898 aaPredicted RBP16.91■□□□□ 0.3
GABPA-203ENST00000487266 MYH10P35580 1976 aa16.91■□□□□ 0.3
GABPA-203ENST00000487266 F8VP50 259 aa16.9■□□□□ 0.3
GABPA-203ENST00000487266 ZNF263O14978 683 aa16.9■□□□□ 0.3
GABPA-203ENST00000487266 MAPK13O15264 365 aa16.9■□□□□ 0.3
GABPA-203ENST00000487266 SMC2O95347 1197 aa16.9■□□□□ 0.3
GABPA-203ENST00000487266 ASS1P00966 412 aaKnown RBP16.9■□□□□ 0.3
GABPA-203ENST00000487266 RPL13P26373 211 aaKnown RBP16.9■□□□□ 0.3
GABPA-203ENST00000487266 HOXD11P31277 338 aaPredicted RBP16.9■□□□□ 0.3
GABPA-203ENST00000487266 PSMC2P35998 433 aaKnown RBP16.9■□□□□ 0.3
GABPA-203ENST00000487266 MAGEA11P43364 429 aa16.9■□□□□ 0.3
GABPA-203ENST00000487266 SOX9P48436 509 aa16.9■□□□□ 0.3
GABPA-203ENST00000487266 FCHO2Q0JRZ9 810 aa16.9■□□□□ 0.3
GABPA-203ENST00000487266 EDRF1Q3B7T1 1238 aa16.9■□□□□ 0.3
GABPA-203ENST00000487266 YAF2Q8IY57 180 aa16.9■□□□□ 0.3
GABPA-203ENST00000487266 CMTM8Q8IZV2 173 aa16.9■□□□□ 0.3
GABPA-203ENST00000487266 IRF7Q92985 503 aa16.9■□□□□ 0.3
GABPA-203ENST00000487266 SHDQ96IW2 340 aa16.9■□□□□ 0.3
GABPA-203ENST00000487266 SLC22A12Q96S37 553 aa16.9■□□□□ 0.3
GABPA-203ENST00000487266 TRPC7Q9HCX4 862 aa16.9■□□□□ 0.3
GABPA-203ENST00000487266 PIAS3Q9Y6X2 628 aa16.9■□□□□ 0.3
GABPA-203ENST00000487266 CACNA1IQ9P0X4 2223 aa16.9■□□□□ 0.3
GABPA-203ENST00000487266 FAM170BA6NMN3 283 aa16.89■□□□□ 0.29
GABPA-203ENST00000487266 DPYSL4O14531 572 aa16.89■□□□□ 0.29
GABPA-203ENST00000487266 IKBKBO14920 756 aa16.89■□□□□ 0.29
GABPA-203ENST00000487266 KINO60870 393 aaKnown RBP16.89■□□□□ 0.29
GABPA-203ENST00000487266 KRT13P13646 458 aa16.89■□□□□ 0.29
GABPA-203ENST00000487266 CD44P16070 742 aaKnown RBP16.89■□□□□ 0.29
GABPA-203ENST00000487266 NUBP1P53384 320 aa16.89■□□□□ 0.29
GABPA-203ENST00000487266 NOP14P78316 857 aaKnown RBP16.89■□□□□ 0.29
GABPA-203ENST00000487266 TNK2Q07912 1038 aa16.89■□□□□ 0.29
GABPA-203ENST00000487266 ANGPT1Q15389 498 aa16.89■□□□□ 0.29
GABPA-203ENST00000487266 MAPRE1Q15691 268 aaKnown RBP16.89■□□□□ 0.29
GABPA-203ENST00000487266 SGSM1Q2NKQ1 1148 aa16.89■□□□□ 0.29
GABPA-203ENST00000487266 ANKRD40Q6AI12 368 aa16.89■□□□□ 0.29
GABPA-203ENST00000487266 VSTM1Q6UX27 236 aa16.89■□□□□ 0.29
GABPA-203ENST00000487266 ACOT1Q86TX2 421 aa16.89■□□□□ 0.29
GABPA-203ENST00000487266 USP13Q92995 863 aaPredicted RBP16.89■□□□□ 0.29
GABPA-203ENST00000487266 TRMT2BQ96GJ1 504 aaKnown RBP16.89■□□□□ 0.29
GABPA-203ENST00000487266 MYRFLQ96LU7 910 aa16.89■□□□□ 0.29
GABPA-203ENST00000487266 TWNKQ96RR1 684 aa16.89■□□□□ 0.29
GABPA-203ENST00000487266 NDRG2Q9UN36 371 aaKnown RBP16.89■□□□□ 0.29
GABPA-203ENST00000487266 MYO16Q9Y6X6 1858 aa16.88■□□□□ 0.29
GABPA-203ENST00000487266 C2orf78A6NCI8 922 aa16.88■□□□□ 0.29
GABPA-203ENST00000487266 CCDC130P13994 396 aa16.88■□□□□ 0.29
GABPA-203ENST00000487266 ANXA13P27216 316 aa16.88■□□□□ 0.29
GABPA-203ENST00000487266 MRE11P49959 708 aa16.88■□□□□ 0.29
GABPA-203ENST00000487266 IFRD2Q12894 506 aaPredicted RBP16.88■□□□□ 0.29
GABPA-203ENST00000487266 FAM35AQ86V20 835 aa16.88■□□□□ 0.29
GABPA-203ENST00000487266 ADSSL1Q8N142 457 aa16.88■□□□□ 0.29
GABPA-203ENST00000487266 TTC16Q8NEE8 873 aa16.88■□□□□ 0.29
GABPA-203ENST00000487266 BPIFB1Q8TDL5 484 aa16.88■□□□□ 0.29
GABPA-203ENST00000487266 MRPS31Q92665 395 aaKnown RBP16.88■□□□□ 0.29
GABPA-203ENST00000487266 SEMA4DQ92854 862 aa16.88■□□□□ 0.29
GABPA-203ENST00000487266 E2F7Q96AV8 911 aa16.88■□□□□ 0.29
GABPA-203ENST00000487266 CYP2S1Q96SQ9 504 aa16.88■□□□□ 0.29
GABPA-203ENST00000487266 GTSE1Q9NYZ3 720 aa16.88■□□□□ 0.29
GABPA-203ENST00000487266 UXTQ9UBK9 157 aaPredicted RBP16.88■□□□□ 0.29
GABPA-203ENST00000487266 BIN1O00499 593 aa16.87■□□□□ 0.29
GABPA-203ENST00000487266 TRIM66O15016 1216 aa16.87■□□□□ 0.29
GABPA-203ENST00000487266 CETN3O15182 167 aa16.87■□□□□ 0.29
GABPA-203ENST00000487266 CHADO15335 359 aa16.87■□□□□ 0.29
GABPA-203ENST00000487266 EPB41P11171 864 aaKnown RBP16.87■□□□□ 0.29
GABPA-203ENST00000487266 BMP6P22004 513 aa16.87■□□□□ 0.29
GABPA-203ENST00000487266 AVPR1AP37288 418 aa16.87■□□□□ 0.29
GABPA-203ENST00000487266 NDST1P52848 882 aa16.87■□□□□ 0.29
GABPA-203ENST00000487266 COBLL1Q53SF7 1204 aa16.87■□□□□ 0.29
GABPA-203ENST00000487266 DCAF17Q5H9S7 520 aaPredicted RBP16.87■□□□□ 0.29
GABPA-203ENST00000487266 TRIM68Q6AZZ1 485 aa16.87■□□□□ 0.29
GABPA-203ENST00000487266 ZNF852Q6ZMS4 543 aa16.87■□□□□ 0.29
GABPA-203ENST00000487266 DENND5BQ6ZUT9 1274 aa16.87■□□□□ 0.29
GABPA-203ENST00000487266 PAQR9Q6ZVX9 377 aa16.87■□□□□ 0.29
GABPA-203ENST00000487266 MON1AQ86VX9 555 aa16.87■□□□□ 0.29
GABPA-203ENST00000487266 SPATA17Q96L03 361 aa16.87■□□□□ 0.29
GABPA-203ENST00000487266 KCNK16Q96T55 309 aa16.87■□□□□ 0.29
GABPA-203ENST00000487266 TSG101Q99816 390 aa16.87■□□□□ 0.29
GABPA-203ENST00000487266 MED10Q9BTT4 135 aa16.87■□□□□ 0.29
GABPA-203ENST00000487266 ELOVL4Q9GZR5 314 aa16.87■□□□□ 0.29
GABPA-203ENST00000487266 TMEM8AQ9HCN3 771 aa16.87■□□□□ 0.29
GABPA-203ENST00000487266 KRT82Q9NSB4 513 aa16.87■□□□□ 0.29
GABPA-203ENST00000487266 FAM49BQ9NUQ9 324 aa16.87■□□□□ 0.29
GABPA-203ENST00000487266 FAM163BP0C2L3 166 aa16.86■□□□□ 0.29
GABPA-203ENST00000487266 CD58P19256 250 aa16.86■□□□□ 0.29
GABPA-203ENST00000487266 CCNE1P24864 410 aa16.86■□□□□ 0.29
GABPA-203ENST00000487266 DDX6P26196 483 aaKnown RBP eCLIP16.86■□□□□ 0.29
GABPA-203ENST00000487266 WEE1P30291 646 aa16.86■□□□□ 0.29
GABPA-203ENST00000487266 MXI1P50539 228 aa16.86■□□□□ 0.29
GABPA-203ENST00000487266 WDR44Q5JSH3 913 aa16.86■□□□□ 0.29
GABPA-203ENST00000487266 KLHL10Q6JEL2 608 aa16.86■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 205.7 ms