RNA–Protein interactions for RNA: ENST00000484186.5

NUP50-215, Transcript of nucleoporin 50, humanhuman

TSL 5

Gene NUP50, Length 431 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-215ENST00000484186 GOLGA5Q8TBA6 731 aa10.08□□□□□ -0.8
NUP50-215ENST00000484186 MYCBPAPQ8TBZ2 947 aa10.08□□□□□ -0.8
NUP50-215ENST00000484186 PAGE5Q96GU1 130 aa10.08□□□□□ -0.8
NUP50-215ENST00000484186 SPATA17Q96L03 361 aa10.08□□□□□ -0.8
NUP50-215ENST00000484186 CEP295NLQ96MC4 621 aa10.08□□□□□ -0.8
NUP50-215ENST00000484186 CYP2S1Q96SQ9 504 aa10.08□□□□□ -0.8
NUP50-215ENST00000484186 MRPL45Q9BRJ2 306 aaKnown RBP10.08□□□□□ -0.8
NUP50-215ENST00000484186 GZF1Q9H116 711 aaPredicted RBP10.08□□□□□ -0.8
NUP50-215ENST00000484186 SNX25Q9H3E2 840 aa10.08□□□□□ -0.8
NUP50-215ENST00000484186 TRPC7Q9HCX4 862 aa10.08□□□□□ -0.8
NUP50-215ENST00000484186 HPS4Q9NQG7 708 aa10.08□□□□□ -0.8
NUP50-215ENST00000484186 NCDNQ9UBB6 729 aa10.08□□□□□ -0.8
NUP50-215ENST00000484186 USP25Q9UHP3 1055 aa10.08□□□□□ -0.8
NUP50-215ENST00000484186 TRAV19A0A0A6YYK7 116 aa10.07□□□□□ -0.8
NUP50-215ENST00000484186 A0A1B0GVL5 298 aa10.07□□□□□ -0.8
NUP50-215ENST00000484186 PHACTR2O75167 634 aa10.07□□□□□ -0.8
NUP50-215ENST00000484186 PAPSS2O95340 614 aaPredicted RBP10.07□□□□□ -0.8
NUP50-215ENST00000484186 STAU1O95793 577 aaKnown RBP10.07□□□□□ -0.8
NUP50-215ENST00000484186 PTPN1P18031 435 aaKnown RBP10.07□□□□□ -0.8
NUP50-215ENST00000484186 CMA1P23946 247 aa10.07□□□□□ -0.8
NUP50-215ENST00000484186 ANXA13P27216 316 aa10.07□□□□□ -0.8
NUP50-215ENST00000484186 MYL6P60660 151 aa10.07□□□□□ -0.8
NUP50-215ENST00000484186 TNNC1P63316 161 aa10.07□□□□□ -0.8
NUP50-215ENST00000484186 FOXK2Q01167 660 aa10.07□□□□□ -0.8
NUP50-215ENST00000484186 AMPD2Q01433 879 aa10.07□□□□□ -0.8
NUP50-215ENST00000484186 FAM160A1Q05DH4 1040 aa10.07□□□□□ -0.8
NUP50-215ENST00000484186 CCINQ13939 588 aa10.07□□□□□ -0.8
NUP50-215ENST00000484186 PDGFRLQ15198 375 aa10.07□□□□□ -0.8
NUP50-215ENST00000484186 KMT5BQ4FZB7 885 aa10.07□□□□□ -0.8
NUP50-215ENST00000484186 MDH1BQ5I0G3 518 aa10.07□□□□□ -0.8
NUP50-215ENST00000484186 Q6ZS52 159 aa10.07□□□□□ -0.8
NUP50-215ENST00000484186 DENND5BQ6ZUT9 1274 aa10.07□□□□□ -0.8
NUP50-215ENST00000484186 GPR161Q8N6U8 529 aaKnown RBP10.07□□□□□ -0.8
NUP50-215ENST00000484186 RIN3Q8TB24 985 aa10.07□□□□□ -0.8
NUP50-215ENST00000484186 PLEKHO2Q8TD55 490 aa10.07□□□□□ -0.8
NUP50-215ENST00000484186 PARD3BQ8TEW8 1205 aa10.07□□□□□ -0.8
NUP50-215ENST00000484186 TMEM174Q8WUU8 243 aa10.07□□□□□ -0.8
NUP50-215ENST00000484186 SECISBP2LQ93073 1101 aaKnown RBP10.07□□□□□ -0.8
NUP50-215ENST00000484186 SYAP1Q96A49 352 aaPredicted RBP10.07□□□□□ -0.8
NUP50-215ENST00000484186 PCED1BQ96HM7 432 aa10.07□□□□□ -0.8
NUP50-215ENST00000484186 SPATA32Q96LK8 384 aa10.07□□□□□ -0.8
NUP50-215ENST00000484186 XYLT2Q9H1B5 865 aa10.07□□□□□ -0.8
NUP50-215ENST00000484186 EBF3Q9H4W6 596 aa10.07□□□□□ -0.8
NUP50-215ENST00000484186 EXOC1Q9NV70 894 aa10.07□□□□□ -0.8
NUP50-215ENST00000484186 DMAC2Q9NW81 257 aa10.07□□□□□ -0.8
NUP50-215ENST00000484186 GCNT4Q9P109 453 aa10.07□□□□□ -0.8
NUP50-215ENST00000484186 SMG5Q9UPR3 1016 aaKnown RBP10.07□□□□□ -0.8
NUP50-215ENST00000484186 ZDHHC9Q9Y397 364 aa10.07□□□□□ -0.8
NUP50-215ENST00000484186 NME7Q9Y5B8 376 aa10.07□□□□□ -0.8
NUP50-215ENST00000484186 EP300Q09472 2414 aaPredicted RBP10.07□□□□□ -0.8
NUP50-215ENST00000484186 VPS13AQ96RL7 3174 aa10.07□□□□□ -0.8
NUP50-215ENST00000484186 CFAP54Q96N23 3096 aa10.07□□□□□ -0.8
NUP50-215ENST00000484186 GVINP1Q7Z2Y8 2422 aa10.06□□□□□ -0.8
NUP50-215ENST00000484186 DENND4CQ5VZ89 1909 aa10.06□□□□□ -0.8
NUP50-215ENST00000484186 OTOL1A6NHN0 477 aaPredicted RBP10.06□□□□□ -0.8
NUP50-215ENST00000484186 LRRIQ3A6PVS8 624 aaPredicted RBP10.06□□□□□ -0.8
NUP50-215ENST00000484186 A8MXQ7 604 aa10.06□□□□□ -0.8
NUP50-215ENST00000484186 K7ESF4 209 aa10.06□□□□□ -0.8
NUP50-215ENST00000484186 TRDMT1O14717 391 aaKnown RBP10.06□□□□□ -0.8
NUP50-215ENST00000484186 TRIM66O15016 1216 aa10.06□□□□□ -0.8
NUP50-215ENST00000484186 C4BPAP04003 597 aaKnown RBP10.06□□□□□ -0.8
NUP50-215ENST00000484186 MYL1P05976 194 aa10.06□□□□□ -0.8
NUP50-215ENST00000484186 CKMP06732 381 aa10.06□□□□□ -0.8
NUP50-215ENST00000484186 ARSAP15289 507 aa10.06□□□□□ -0.8
NUP50-215ENST00000484186 PFKFB1P16118 471 aa10.06□□□□□ -0.8
NUP50-215ENST00000484186 HDCP19113 662 aa10.06□□□□□ -0.8
NUP50-215ENST00000484186 CASP4P49662 377 aa10.06□□□□□ -0.8
NUP50-215ENST00000484186 AP3M2P53677 418 aa10.06□□□□□ -0.8
NUP50-215ENST00000484186 CLDN10P78369 228 aa10.06□□□□□ -0.8
NUP50-215ENST00000484186 GRSF1Q12849 480 aaKnown RBP eCLIP10.06□□□□□ -0.8
NUP50-215ENST00000484186 BIRC3Q13489 604 aa10.06□□□□□ -0.8
NUP50-215ENST00000484186 MTF1Q14872 753 aa10.06□□□□□ -0.8
NUP50-215ENST00000484186 ZNF77Q15935 545 aa10.06□□□□□ -0.8
NUP50-215ENST00000484186 TMEM196Q5HYL7 178 aa10.06□□□□□ -0.8
NUP50-215ENST00000484186 ERMP1Q7Z2K6 904 aa10.06□□□□□ -0.8
NUP50-215ENST00000484186 SLC9A9Q8IVB4 645 aa10.06□□□□□ -0.8
NUP50-215ENST00000484186 ARL14EPQ8N8R7 260 aaPredicted RBP10.06□□□□□ -0.8
NUP50-215ENST00000484186 KIAA0895Q8NCT3 520 aa10.06□□□□□ -0.8
NUP50-215ENST00000484186 OSCP1Q8WVF1 389 aa10.06□□□□□ -0.8
NUP50-215ENST00000484186 C8orf48Q96LL4 319 aa10.06□□□□□ -0.8
NUP50-215ENST00000484186 SLC22A12Q96S37 553 aa10.06□□□□□ -0.8
NUP50-215ENST00000484186 TTLL2Q9BWV7 592 aa10.06□□□□□ -0.8
NUP50-215ENST00000484186 KCTD10Q9H3F6 313 aa10.06□□□□□ -0.8
NUP50-215ENST00000484186 VRTNQ9H8Y1 702 aa10.06□□□□□ -0.8
NUP50-215ENST00000484186 DUS2Q9NX74 493 aaKnown RBP10.06□□□□□ -0.8
NUP50-215ENST00000484186 EHD2Q9NZN4 543 aa10.06□□□□□ -0.8
NUP50-215ENST00000484186 TRPM5Q9NZQ8 1165 aa10.06□□□□□ -0.8
NUP50-215ENST00000484186 NXF1Q9UBU9 619 aaKnown RBP10.06□□□□□ -0.8
NUP50-215ENST00000484186 HPSEQ9Y251 543 aa10.06□□□□□ -0.8
NUP50-215ENST00000484186 C2orf78A6NCI8 922 aa10.05□□□□□ -0.8
NUP50-215ENST00000484186 CHURC1-FNTBB4DL54 471 aa10.05□□□□□ -0.8
NUP50-215ENST00000484186 F8VP50 259 aa10.05□□□□□ -0.8
NUP50-215ENST00000484186 PDXKO00764 312 aa10.05□□□□□ -0.8
NUP50-215ENST00000484186 HRO43593 1189 aa10.05□□□□□ -0.8
NUP50-215ENST00000484186 TCF3P15923 654 aa10.05□□□□□ -0.8
NUP50-215ENST00000484186 PFKLP17858 780 aa10.05□□□□□ -0.8
NUP50-215ENST00000484186 HOXA6P31267 233 aa10.05□□□□□ -0.8
NUP50-215ENST00000484186 CNR2P34972 360 aa10.05□□□□□ -0.8
NUP50-215ENST00000484186 GJA4P35212 333 aa10.05□□□□□ -0.8
NUP50-215ENST00000484186 SYKP43405 635 aa10.05□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms