RNA–Protein interactions for RNA: ENST00000477561.5

HDAC6-221, Transcript of histone deacetylase 6, humanhuman

TSL 5

Gene HDAC6, Length 764 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-221ENST00000477561 CSH2P0DML3 217 aa8.82□□□□□ -1
HDAC6-221ENST00000477561 CD44P16070 742 aaKnown RBP8.82□□□□□ -1
HDAC6-221ENST00000477561 PSMC3P17980 439 aa8.82□□□□□ -1
HDAC6-221ENST00000477561 CDC25CP30307 473 aa8.82□□□□□ -1
HDAC6-221ENST00000477561 CACNA2D1P54289 1103 aa8.82□□□□□ -1
HDAC6-221ENST00000477561 PFKPQ01813 784 aa8.82□□□□□ -1
HDAC6-221ENST00000477561 NHLH1Q02575 133 aa8.82□□□□□ -1
HDAC6-221ENST00000477561 MAPRE1Q15691 268 aaKnown RBP8.82□□□□□ -1
HDAC6-221ENST00000477561 MLF2Q15773 248 aaPredicted RBP8.82□□□□□ -1
HDAC6-221ENST00000477561 EDRF1Q3B7T1 1238 aa8.82□□□□□ -1
HDAC6-221ENST00000477561 CFAP221Q4G0U5 840 aa8.82□□□□□ -1
HDAC6-221ENST00000477561 TXNDC8Q6A555 127 aa8.82□□□□□ -1
HDAC6-221ENST00000477561 KLHL10Q6JEL2 608 aa8.82□□□□□ -1
HDAC6-221ENST00000477561 TPRG1Q6ZUI0 275 aa8.82□□□□□ -1
HDAC6-221ENST00000477561 GAS2L3Q86XJ1 694 aa8.82□□□□□ -1
HDAC6-221ENST00000477561 MFSD6LQ8IWD5 586 aa8.82□□□□□ -1
HDAC6-221ENST00000477561 YAF2Q8IY57 180 aa8.82□□□□□ -1
HDAC6-221ENST00000477561 ADSSL1Q8N142 457 aa8.82□□□□□ -1
HDAC6-221ENST00000477561 MAB21L3Q8N8X9 362 aa8.82□□□□□ -1
HDAC6-221ENST00000477561 TRIML1Q8N9V2 468 aa8.82□□□□□ -1
HDAC6-221ENST00000477561 TTC16Q8NEE8 873 aa8.82□□□□□ -1
HDAC6-221ENST00000477561 TTC8Q8TAM2 541 aa8.82□□□□□ -1
HDAC6-221ENST00000477561 SPATA20Q8TB22 786 aa8.82□□□□□ -1
HDAC6-221ENST00000477561 ANP32BQ92688 251 aaKnown RBP8.82□□□□□ -1
HDAC6-221ENST00000477561 FUBP3Q96I24 572 aaKnown RBP eCLIP8.82□□□□□ -1
HDAC6-221ENST00000477561 ZFYVE19Q96K21 471 aa8.82□□□□□ -1
HDAC6-221ENST00000477561 PHOX2BQ99453 314 aa8.82□□□□□ -1
HDAC6-221ENST00000477561 TSG101Q99816 390 aa8.82□□□□□ -1
HDAC6-221ENST00000477561 B3GNT5Q9BYG0 378 aa8.82□□□□□ -1
HDAC6-221ENST00000477561 ZNF518BQ9C0D4 1074 aa8.82□□□□□ -1
HDAC6-221ENST00000477561 VRTNQ9H8Y1 702 aa8.82□□□□□ -1
HDAC6-221ENST00000477561 TRPV4Q9HBA0 871 aa8.82□□□□□ -1
HDAC6-221ENST00000477561 TRPC7Q9HCX4 862 aa8.82□□□□□ -1
HDAC6-221ENST00000477561 FAM86C1Q9NVL1 165 aa8.82□□□□□ -1
HDAC6-221ENST00000477561 SIT1Q9Y3P8 196 aa8.82□□□□□ -1
HDAC6-221ENST00000477561 MTF2Q9Y483 593 aaPredicted RBP8.82□□□□□ -1
HDAC6-221ENST00000477561 ARIH1Q9Y4X5 557 aaPredicted RBP8.82□□□□□ -1
HDAC6-221ENST00000477561 KMT2EQ8IZD2 1858 aa8.82□□□□□ -1
HDAC6-221ENST00000477561 ZDBF2Q9HCK1 2354 aa8.81□□□□□ -1
HDAC6-221ENST00000477561 ZNF318Q5VUA4 2279 aa8.81□□□□□ -1
HDAC6-221ENST00000477561 KANSL1LA0AUZ9 987 aa8.81□□□□□ -1
HDAC6-221ENST00000477561 F8VP50 259 aa8.81□□□□□ -1
HDAC6-221ENST00000477561 TADA3O75528 432 aa8.81□□□□□ -1
HDAC6-221ENST00000477561 ASS1P00966 412 aaKnown RBP8.81□□□□□ -1
HDAC6-221ENST00000477561 FAM163BP0C2L3 166 aa8.81□□□□□ -1
HDAC6-221ENST00000477561 EPB41P11171 864 aaKnown RBP8.81□□□□□ -1
HDAC6-221ENST00000477561 P4HA1P13674 534 aa8.81□□□□□ -1
HDAC6-221ENST00000477561 BMP6P22004 513 aa8.81□□□□□ -1
HDAC6-221ENST00000477561 ANXA13P27216 316 aa8.81□□□□□ -1
HDAC6-221ENST00000477561 MAGEA11P43364 429 aa8.81□□□□□ -1
HDAC6-221ENST00000477561 NDST1P52848 882 aa8.81□□□□□ -1
HDAC6-221ENST00000477561 PTPN5P54829 565 aa8.81□□□□□ -1
HDAC6-221ENST00000477561 STARD6P59095 220 aa8.81□□□□□ -1
HDAC6-221ENST00000477561 USP46P62068 366 aa8.81□□□□□ -1
HDAC6-221ENST00000477561 IFRD2Q12894 506 aaPredicted RBP8.81□□□□□ -1
HDAC6-221ENST00000477561 UBXN2BQ14CS0 331 aa8.81□□□□□ -1
HDAC6-221ENST00000477561 DCAF17Q5H9S7 520 aaPredicted RBP8.81□□□□□ -1
HDAC6-221ENST00000477561 TCERG1LQ5VWI1 586 aa8.81□□□□□ -1
HDAC6-221ENST00000477561 PHLDB3Q6NSJ2 640 aa8.81□□□□□ -1
HDAC6-221ENST00000477561 VSTM1Q6UX27 236 aa8.81□□□□□ -1
HDAC6-221ENST00000477561 ACOT1Q86TX2 421 aa8.81□□□□□ -1
HDAC6-221ENST00000477561 CMTM8Q8IZV2 173 aa8.81□□□□□ -1
HDAC6-221ENST00000477561 DTWD2Q8NBA8 298 aa8.81□□□□□ -1
HDAC6-221ENST00000477561 B3GALNT2Q8NCR0 500 aa8.81□□□□□ -1
HDAC6-221ENST00000477561 DEPDC1BQ8WUY9 529 aa8.81□□□□□ -1
HDAC6-221ENST00000477561 MRPS31Q92665 395 aaKnown RBP8.81□□□□□ -1
HDAC6-221ENST00000477561 SEMA4DQ92854 862 aa8.81□□□□□ -1
HDAC6-221ENST00000477561 ATOH1Q92858 354 aaPredicted RBP8.81□□□□□ -1
HDAC6-221ENST00000477561 IRF7Q92985 503 aa8.81□□□□□ -1
HDAC6-221ENST00000477561 SHDQ96IW2 340 aa8.81□□□□□ -1
HDAC6-221ENST00000477561 CYP2S1Q96SQ9 504 aa8.81□□□□□ -1
HDAC6-221ENST00000477561 MED10Q9BTT4 135 aa8.81□□□□□ -1
HDAC6-221ENST00000477561 GTPBP4Q9BZE4 634 aaKnown RBP8.81□□□□□ -1
HDAC6-221ENST00000477561 RBSNQ9H1K0 784 aa8.81□□□□□ -1
HDAC6-221ENST00000477561 KCNH6Q9H252 994 aa8.81□□□□□ -1
HDAC6-221ENST00000477561 APOBEC3GQ9HC16 384 aaKnown RBP8.81□□□□□ -1
HDAC6-221ENST00000477561 TMEM8AQ9HCN3 771 aa8.81□□□□□ -1
HDAC6-221ENST00000477561 TMEM30AQ9NV96 361 aa8.81□□□□□ -1
HDAC6-221ENST00000477561 HMGXB4Q9UGU5 601 aa8.81□□□□□ -1
HDAC6-221ENST00000477561 DACH1Q9UI36 760 aa8.81□□□□□ -1
HDAC6-221ENST00000477561 CCL26Q9Y258 94 aa8.81□□□□□ -1
HDAC6-221ENST00000477561 FAM170BA6NMN3 283 aa8.8□□□□□ -1
HDAC6-221ENST00000477561 PPP1R3GB7ZBB8 358 aa8.8□□□□□ -1
HDAC6-221ENST00000477561 ABL1P00519 1130 aa8.8□□□□□ -1
HDAC6-221ENST00000477561 CCDC130P13994 396 aa8.8□□□□□ -1
HDAC6-221ENST00000477561 GLULP15104 373 aa8.8□□□□□ -1
HDAC6-221ENST00000477561 CD58P19256 250 aa8.8□□□□□ -1
HDAC6-221ENST00000477561 CCNE1P24864 410 aa8.8□□□□□ -1
HDAC6-221ENST00000477561 AVPR1AP37288 418 aa8.8□□□□□ -1
HDAC6-221ENST00000477561 ASPAP45381 313 aa8.8□□□□□ -1
HDAC6-221ENST00000477561 SOX9P48436 509 aa8.8□□□□□ -1
HDAC6-221ENST00000477561 STX17P56962 302 aa8.8□□□□□ -1
HDAC6-221ENST00000477561 NOP14P78316 857 aaKnown RBP8.8□□□□□ -1
HDAC6-221ENST00000477561 FKBP3Q00688 224 aaKnown RBP8.8□□□□□ -1
HDAC6-221ENST00000477561 PRKCQQ04759 706 aa8.8□□□□□ -1
HDAC6-221ENST00000477561 STIM1Q13586 685 aa8.8□□□□□ -1
HDAC6-221ENST00000477561 ANO6Q4KMQ2 910 aa8.8□□□□□ -1
HDAC6-221ENST00000477561 COBLL1Q53SF7 1204 aa8.8□□□□□ -1
HDAC6-221ENST00000477561 KRT39Q6A163 491 aa8.8□□□□□ -1
HDAC6-221ENST00000477561 DENND5BQ6ZUT9 1274 aa8.8□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms