RNA–Protein interactions for RNA: ENST00000477234.1

SBF1-208, Transcript of SET binding factor 1, human

TSL 5

Gene SBF1, Length 947 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SBF1-208	ENST00000477234	EDN1	P05305	212 aa		13.23	□□□□□ -0.29
SBF1-208	ENST00000477234	CLTA	P09496	248 aa		13.23	□□□□□ -0.29
SBF1-208	ENST00000477234	FTH1P19	P0C7X4	201 aa		13.23	□□□□□ -0.29
SBF1-208	ENST00000477234	GNS	P15586	552 aa		13.23	□□□□□ -0.29
SBF1-208	ENST00000477234	PFKL	P17858	780 aa		13.23	□□□□□ -0.29
SBF1-208	ENST00000477234	SMTN	P53814	917 aa		13.23	□□□□□ -0.29
SBF1-208	ENST00000477234	UBE2H	P62256	183 aa		13.23	□□□□□ -0.29
SBF1-208	ENST00000477234	ATP2C1	P98194	919 aa	Predicted RBP	13.23	□□□□□ -0.29
SBF1-208	ENST00000477234	PPP2R3A	Q06190	1150 aa		13.23	□□□□□ -0.29
SBF1-208	ENST00000477234	ZNF174	Q15697	407 aa		13.23	□□□□□ -0.29
SBF1-208	ENST00000477234	SKOR2	Q2VWA4	1001 aa	Predicted RBP	13.23	□□□□□ -0.29
SBF1-208	ENST00000477234	SLC10A6	Q3KNW5	377 aa		13.23	□□□□□ -0.29
SBF1-208	ENST00000477234	SLC39A12	Q504Y0	691 aa		13.23	□□□□□ -0.29
SBF1-208	ENST00000477234	C2orf27A	Q580R0	203 aa		13.23	□□□□□ -0.29
SBF1-208	ENST00000477234	TRMT11	Q7Z4G4	463 aa	Known RBP	13.23	□□□□□ -0.29
SBF1-208	ENST00000477234	GLRX5	Q86SX6	157 aa		13.23	□□□□□ -0.29
SBF1-208	ENST00000477234	CD302	Q8IX05	232 aa		13.23	□□□□□ -0.29
SBF1-208	ENST00000477234	KRI1	Q8N9T8	703 aa	Known RBP	13.23	□□□□□ -0.29
SBF1-208	ENST00000477234	KCNV2	Q8TDN2	545 aa		13.23	□□□□□ -0.29
SBF1-208	ENST00000477234	LPIN3	Q9BQK8	851 aa		13.23	□□□□□ -0.29
SBF1-208	ENST00000477234	KIFC3	Q9BVG8	833 aa		13.23	□□□□□ -0.29
SBF1-208	ENST00000477234	TIPIN	Q9BVW5	301 aa		13.23	□□□□□ -0.29
SBF1-208	ENST00000477234	RAB34	Q9BZG1	259 aa		13.23	□□□□□ -0.29
SBF1-208	ENST00000477234	SMG9	Q9H0W8	520 aa	Known RBP	13.23	□□□□□ -0.29
SBF1-208	ENST00000477234	CAPN10	Q9HC96	672 aa		13.23	□□□□□ -0.29
SBF1-208	ENST00000477234	ARHGAP28	Q9P2N2	729 aa		13.23	□□□□□ -0.29
SBF1-208	ENST00000477234	CCL26	Q9Y258	94 aa		13.23	□□□□□ -0.29
SBF1-208	ENST00000477234	CEP192	Q8TEP8	1941 aa		13.23	□□□□□ -0.29
SBF1-208	ENST00000477234	TNRC6B	Q9UPQ9	1833 aa	Known RBP	13.23	□□□□□ -0.29
SBF1-208	ENST00000477234	PTPRD	P23468	1912 aa		13.22	□□□□□ -0.29
SBF1-208	ENST00000477234		E9PAM4	449 aa		13.22	□□□□□ -0.29
SBF1-208	ENST00000477234	CUTA	O60888	179 aa		13.22	□□□□□ -0.29
SBF1-208	ENST00000477234	ZNF217	O75362	1048 aa		13.22	□□□□□ -0.29
SBF1-208	ENST00000477234	PRPF40A	O75400	957 aa	Known RBP	13.22	□□□□□ -0.29
SBF1-208	ENST00000477234	F11	P03951	625 aa		13.22	□□□□□ -0.29
SBF1-208	ENST00000477234	CYP11A1	P05108	521 aa		13.22	□□□□□ -0.29
SBF1-208	ENST00000477234	TCF3	P15923	654 aa		13.22	□□□□□ -0.29
SBF1-208	ENST00000477234	SCP2	P22307	547 aa		13.22	□□□□□ -0.29
SBF1-208	ENST00000477234	EIF2D	P41214	584 aa	Known RBP	13.22	□□□□□ -0.29
SBF1-208	ENST00000477234	MATR3	P43243	847 aa	Known RBP eCLIP	13.22	□□□□□ -0.29
SBF1-208	ENST00000477234	NPTX2	P47972	431 aa		13.22	□□□□□ -0.29
SBF1-208	ENST00000477234	PEX3	P56589	373 aa		13.22	□□□□□ -0.29
SBF1-208	ENST00000477234	LILRA4	P59901	499 aa		13.22	□□□□□ -0.29
SBF1-208	ENST00000477234	NFKBIB	Q15653	356 aa		13.22	□□□□□ -0.29
SBF1-208	ENST00000477234	NFE2	Q16621	373 aa	Predicted RBP	13.22	□□□□□ -0.29
SBF1-208	ENST00000477234	SYCP2L	Q5T4T6	812 aa		13.22	□□□□□ -0.29
SBF1-208	ENST00000477234	ZPBP2	Q6X784	338 aa		13.22	□□□□□ -0.29
SBF1-208	ENST00000477234	ZNF605	Q86T29	641 aa		13.22	□□□□□ -0.29
SBF1-208	ENST00000477234	PGBD3	Q8N328	593 aa		13.22	□□□□□ -0.29
SBF1-208	ENST00000477234	SPATA18	Q8TC71	538 aa		13.22	□□□□□ -0.29
SBF1-208	ENST00000477234	FNBP1	Q96RU3	617 aa		13.22	□□□□□ -0.29
SBF1-208	ENST00000477234	PI4K2A	Q9BTU6	479 aa		13.22	□□□□□ -0.29
SBF1-208	ENST00000477234	TARS2	Q9BW92	718 aa	Known RBP	13.22	□□□□□ -0.29
SBF1-208	ENST00000477234	ZCWPW1	Q9H0M4	648 aa		13.22	□□□□□ -0.29
SBF1-208	ENST00000477234	TMEM74B	Q9NUR3	256 aa		13.22	□□□□□ -0.29
SBF1-208	ENST00000477234	POLR3B	Q9NW08	1133 aa	Predicted RBP	13.22	□□□□□ -0.29
SBF1-208	ENST00000477234	MBD1	Q9UIS9	605 aa	Predicted RBP	13.22	□□□□□ -0.29
SBF1-208	ENST00000477234		A0A087WV48	116 aa		13.21	□□□□□ -0.29
SBF1-208	ENST00000477234		A0A087WWV3	80 aa		13.21	□□□□□ -0.29
SBF1-208	ENST00000477234	SLC9A3R1	O14745	358 aa	Predicted RBP	13.21	□□□□□ -0.29
SBF1-208	ENST00000477234	MED24	O75448	989 aa		13.21	□□□□□ -0.29
SBF1-208	ENST00000477234	ZIC2	O95409	532 aa	Predicted RBP	13.21	□□□□□ -0.29
SBF1-208	ENST00000477234	CKM	P06732	381 aa		13.21	□□□□□ -0.29
SBF1-208	ENST00000477234	OR52Z1	P0C646	297 aa		13.21	□□□□□ -0.29
SBF1-208	ENST00000477234	HAPLN1	P10915	354 aa	Predicted RBP	13.21	□□□□□ -0.29
SBF1-208	ENST00000477234	CD59	P13987	128 aa		13.21	□□□□□ -0.29
SBF1-208	ENST00000477234	ATF6	P18850	670 aa		13.21	□□□□□ -0.29
SBF1-208	ENST00000477234	PTGER3	P43115	390 aa		13.21	□□□□□ -0.29
SBF1-208	ENST00000477234	RPL10A	P62906	217 aa	Known RBP	13.21	□□□□□ -0.29
SBF1-208	ENST00000477234	RPL6	Q02878	288 aa	Known RBP	13.21	□□□□□ -0.29
SBF1-208	ENST00000477234	EML3	Q32P44	896 aa		13.21	□□□□□ -0.29
SBF1-208	ENST00000477234	TXNDC8	Q6A555	127 aa		13.21	□□□□□ -0.29
SBF1-208	ENST00000477234	ADAL	Q6DHV7	355 aa		13.21	□□□□□ -0.29
SBF1-208	ENST00000477234	DTHD1	Q6ZMT9	781 aa		13.21	□□□□□ -0.29
SBF1-208	ENST00000477234	TOGARAM2	Q6ZUX3	1019 aa		13.21	□□□□□ -0.29
SBF1-208	ENST00000477234	ARMCX6	Q7L4S7	300 aa		13.21	□□□□□ -0.29
SBF1-208	ENST00000477234	ENGASE	Q8NFI3	743 aa		13.21	□□□□□ -0.29
SBF1-208	ENST00000477234	SLC39A7	Q92504	469 aa		13.21	□□□□□ -0.29
SBF1-208	ENST00000477234	SENP8	Q96LD8	212 aa		13.21	□□□□□ -0.29
SBF1-208	ENST00000477234	BHMT2	Q9H2M3	363 aa		13.21	□□□□□ -0.29
SBF1-208	ENST00000477234	TUBGCP4	Q9UGJ1	667 aa		13.21	□□□□□ -0.29
SBF1-208	ENST00000477234	RAX	Q9Y2V3	346 aa		13.21	□□□□□ -0.29
SBF1-208	ENST00000477234	PCDHB5	Q9Y5E4	795 aa		13.21	□□□□□ -0.29
SBF1-208	ENST00000477234	SRPRB	Q9Y5M8	271 aa	Known RBP	13.21	□□□□□ -0.29
SBF1-208	ENST00000477234	MYO18A	Q92614	2054 aa	Known RBP	13.2	□□□□□ -0.3
SBF1-208	ENST00000477234		A0A1W2PQ27	194 aa		13.2	□□□□□ -0.3
SBF1-208	ENST00000477234		A0A1W2PQ64	194 aa		13.2	□□□□□ -0.3
SBF1-208	ENST00000477234	TTC26	A0AVF1	554 aa		13.2	□□□□□ -0.3
SBF1-208	ENST00000477234	PALM2-AKAP2	B1ALY0	433 aa	Predicted RBP	13.2	□□□□□ -0.3
SBF1-208	ENST00000477234		K7EQS6	105 aa		13.2	□□□□□ -0.3
SBF1-208	ENST00000477234	SOAT2	O75908	522 aa		13.2	□□□□□ -0.3
SBF1-208	ENST00000477234	APOD	P05090	189 aa		13.2	□□□□□ -0.3
SBF1-208	ENST00000477234	HARS	P12081	509 aa	Known RBP	13.2	□□□□□ -0.3
SBF1-208	ENST00000477234	ITPKA	P23677	461 aa		13.2	□□□□□ -0.3
SBF1-208	ENST00000477234	LONP1	P36776	959 aa	Known RBP	13.2	□□□□□ -0.3
SBF1-208	ENST00000477234	TXLNA	P40222	546 aa		13.2	□□□□□ -0.3
SBF1-208	ENST00000477234	ABCG1	P45844	678 aa		13.2	□□□□□ -0.3
SBF1-208	ENST00000477234	SEC13	P55735	322 aa		13.2	□□□□□ -0.3
SBF1-208	ENST00000477234	TSPY1	Q01534	308 aa		13.2	□□□□□ -0.3
SBF1-208	ENST00000477234	ZNF33A	Q06730	810 aa		13.2	□□□□□ -0.3

Retrieved 100 of 20,778 RNA–protein pairs in 59.1 ms