RNA–Protein interactions for RNA: ENST00000476413.1

VPS50-212, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 5

Gene VPS50, Length 381 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-212ENST00000476413 TBC1D20Q96BZ9 403 aa7.05□□□□□ -1.28
VPS50-212ENST00000476413 ADOQ96SZ5 270 aa7.05□□□□□ -1.28
VPS50-212ENST00000476413 PTDSS2Q9BVG9 487 aa7.05□□□□□ -1.28
VPS50-212ENST00000476413 FAM83DQ9H4H8 585 aa7.05□□□□□ -1.28
VPS50-212ENST00000476413 ZSCAN32Q9NX65 697 aa7.05□□□□□ -1.28
VPS50-212ENST00000476413 LRFN1Q9P244 771 aa7.05□□□□□ -1.28
VPS50-212ENST00000476413 FPGT-TNNI3KV9GXZ4 949 aa7.05□□□□□ -1.28
VPS50-212ENST00000476413 AQP7P3A6NL99 342 aa7.04□□□□□ -1.28
VPS50-212ENST00000476413 PIP5K1BO14986 540 aa7.04□□□□□ -1.28
VPS50-212ENST00000476413 PECAM1P16284 738 aaPredicted RBP7.04□□□□□ -1.28
VPS50-212ENST00000476413 ACRV1P26436 265 aa7.04□□□□□ -1.28
VPS50-212ENST00000476413 PPM1FP49593 454 aaPredicted RBP7.04□□□□□ -1.28
VPS50-212ENST00000476413 NDUFV1P49821 464 aa7.04□□□□□ -1.28
VPS50-212ENST00000476413 CRHR2Q13324 411 aa7.04□□□□□ -1.28
VPS50-212ENST00000476413 R3HDM1Q15032 1099 aaKnown RBP7.04□□□□□ -1.28
VPS50-212ENST00000476413 GEN1Q17RS7 908 aa7.04□□□□□ -1.28
VPS50-212ENST00000476413 SLC5A9Q2M3M2 681 aa7.04□□□□□ -1.28
VPS50-212ENST00000476413 CD300EQ496F6 205 aaPredicted RBP7.04□□□□□ -1.28
VPS50-212ENST00000476413 RABL3Q5HYI8 236 aa7.04□□□□□ -1.28
VPS50-212ENST00000476413 VPS53Q5VIR6 699 aa7.04□□□□□ -1.28
VPS50-212ENST00000476413 JMJD6Q6NYC1 403 aaPredicted RBP7.04□□□□□ -1.28
VPS50-212ENST00000476413 LAYNQ6UX15 382 aa7.04□□□□□ -1.28
VPS50-212ENST00000476413 SUGP1Q8IWZ8 645 aaKnown RBP7.04□□□□□ -1.28
VPS50-212ENST00000476413 FAM9AQ8IZU1 332 aaPredicted RBP7.04□□□□□ -1.28
VPS50-212ENST00000476413 CPT1CQ8TCG5 803 aa7.04□□□□□ -1.28
VPS50-212ENST00000476413 TRAPPC12Q8WVT3 735 aa7.04□□□□□ -1.28
VPS50-212ENST00000476413 SORBS1Q9BX66 1292 aaKnown RBP7.04□□□□□ -1.28
VPS50-212ENST00000476413 RNF181Q9P0P0 153 aa7.04□□□□□ -1.28
VPS50-212ENST00000476413 DKK2Q9UBU2 259 aa7.04□□□□□ -1.28
VPS50-212ENST00000476413 NDRG4Q9ULP0 352 aaKnown RBP7.04□□□□□ -1.28
VPS50-212ENST00000476413 SSX2IPQ9Y2D8 614 aa7.04□□□□□ -1.28
VPS50-212ENST00000476413 FER1L4A9Z1Z3 1794 aa7.04□□□□□ -1.28
VPS50-212ENST00000476413 PIAS2O75928 621 aa7.03□□□□□ -1.28
VPS50-212ENST00000476413 NCR1O76036 304 aa7.03□□□□□ -1.28
VPS50-212ENST00000476413 ARP10275 920 aa7.03□□□□□ -1.28
VPS50-212ENST00000476413 ITGALP20701 1170 aa7.03□□□□□ -1.28
VPS50-212ENST00000476413 NR4A1P22736 598 aa7.03□□□□□ -1.28
VPS50-212ENST00000476413 PPIFP30405 207 aaKnown RBP7.03□□□□□ -1.28
VPS50-212ENST00000476413 GRM1Q13255 1194 aa7.03□□□□□ -1.28
VPS50-212ENST00000476413 HLXQ14774 488 aaPredicted RBP7.03□□□□□ -1.28
VPS50-212ENST00000476413 POSTNQ15063 836 aa7.03□□□□□ -1.28
VPS50-212ENST00000476413 CACHD1Q5VU97 1274 aa7.03□□□□□ -1.28
VPS50-212ENST00000476413 ARL6IP4Q66PJ3 421 aaKnown RBP7.03□□□□□ -1.28
VPS50-212ENST00000476413 FOXR2Q6PJQ5 311 aa7.03□□□□□ -1.28
VPS50-212ENST00000476413 KRT73Q86Y46 540 aa7.03□□□□□ -1.28
VPS50-212ENST00000476413 TMPRSS6Q8IU80 811 aa7.03□□□□□ -1.28
VPS50-212ENST00000476413 OR1N1Q8NGS0 311 aa7.03□□□□□ -1.28
VPS50-212ENST00000476413 EID2BQ96D98 161 aa7.03□□□□□ -1.28
VPS50-212ENST00000476413 TRIM5Q9C035 493 aa7.03□□□□□ -1.28
VPS50-212ENST00000476413 TMEM74BQ9NUR3 256 aa7.03□□□□□ -1.28
VPS50-212ENST00000476413 ST6GALNAC2Q9UJ37 374 aa7.03□□□□□ -1.28
VPS50-212ENST00000476413 MAP3K2Q9Y2U5 619 aa7.03□□□□□ -1.28
VPS50-212ENST00000476413 MTO1Q9Y2Z2 717 aaKnown RBP7.03□□□□□ -1.28
VPS50-212ENST00000476413 OR2W5A6NFC9 320 aa7.02□□□□□ -1.29
VPS50-212ENST00000476413 M0R3H8 397 aa7.02□□□□□ -1.29
VPS50-212ENST00000476413 CD3EAPO15446 510 aaKnown RBP7.02□□□□□ -1.29
VPS50-212ENST00000476413 ASNA1O43681 348 aa7.02□□□□□ -1.29
VPS50-212ENST00000476413 ERN1O75460 977 aaKnown RBP7.02□□□□□ -1.29
VPS50-212ENST00000476413 HOXA5P20719 270 aa7.02□□□□□ -1.29
VPS50-212ENST00000476413 GATA3P23771 443 aa7.02□□□□□ -1.29
VPS50-212ENST00000476413 NPTX2P47972 431 aa7.02□□□□□ -1.29
VPS50-212ENST00000476413 SELENOPP49908 381 aa7.02□□□□□ -1.29
VPS50-212ENST00000476413 RPS7P62081 194 aaKnown RBP7.02□□□□□ -1.29
VPS50-212ENST00000476413 FHL3Q13643 280 aa7.02□□□□□ -1.29
VPS50-212ENST00000476413 BEAN1Q3B7T3 259 aa7.02□□□□□ -1.29
VPS50-212ENST00000476413 EEF1AKMT2Q5JPI9 291 aaKnown RBP7.02□□□□□ -1.29
VPS50-212ENST00000476413 RBM20Q5T481 1227 aaKnown RBP7.02□□□□□ -1.29
VPS50-212ENST00000476413 ARHGAP40Q5TG30 622 aa7.02□□□□□ -1.29
VPS50-212ENST00000476413 TANGO2Q6ICL3 276 aa7.02□□□□□ -1.29
VPS50-212ENST00000476413 ZNF585AQ6P3V2 769 aa7.02□□□□□ -1.29
VPS50-212ENST00000476413 MICALCLQ6ZW33 695 aa7.02□□□□□ -1.29
VPS50-212ENST00000476413 ZNF354CQ86Y25 554 aa7.02□□□□□ -1.29
VPS50-212ENST00000476413 DNAJB14Q8TBM8 379 aa7.02□□□□□ -1.29
VPS50-212ENST00000476413 PPP2R3CQ969Q6 453 aa7.02□□□□□ -1.29
VPS50-212ENST00000476413 TMEM125Q96AQ2 219 aa7.02□□□□□ -1.29
VPS50-212ENST00000476413 BOD1Q96IK1 185 aa7.02□□□□□ -1.29
VPS50-212ENST00000476413 FAM227BQ96M60 508 aa7.02□□□□□ -1.29
VPS50-212ENST00000476413 OSBPL9Q96SU4 736 aa7.02□□□□□ -1.29
VPS50-212ENST00000476413 ADAM2Q99965 735 aa7.02□□□□□ -1.29
VPS50-212ENST00000476413 KATNAL1Q9BW62 490 aa7.02□□□□□ -1.29
VPS50-212ENST00000476413 VPS51Q9UID3 782 aa7.02□□□□□ -1.29
VPS50-212ENST00000476413 HPSEQ9Y251 543 aa7.02□□□□□ -1.29
VPS50-212ENST00000476413 DTNAQ9Y4J8 743 aa7.02□□□□□ -1.29
VPS50-212ENST00000476413 UTP18Q9Y5J1 556 aaKnown RBP eCLIP7.02□□□□□ -1.29
VPS50-212ENST00000476413 GAGE12BA1L429 117 aa7.01□□□□□ -1.29
VPS50-212ENST00000476413 GAGE12HA6NDE8 117 aa7.01□□□□□ -1.29
VPS50-212ENST00000476413 ADM5C9JUS6 153 aa7.01□□□□□ -1.29
VPS50-212ENST00000476413 IPO5O00410 1097 aaKnown RBP7.01□□□□□ -1.29
VPS50-212ENST00000476413 PCDH17O14917 1159 aa7.01□□□□□ -1.29
VPS50-212ENST00000476413 PLSCR1O15162 318 aa7.01□□□□□ -1.29
VPS50-212ENST00000476413 SRGAP2O75044 1071 aa7.01□□□□□ -1.29
VPS50-212ENST00000476413 RECQL4O94761 1208 aa7.01□□□□□ -1.29
VPS50-212ENST00000476413 RASAL1O95294 804 aa7.01□□□□□ -1.29
VPS50-212ENST00000476413 DHRS4L1P0CG22 281 aa7.01□□□□□ -1.29
VPS50-212ENST00000476413 IDEP14735 1019 aa7.01□□□□□ -1.29
VPS50-212ENST00000476413 NPPBP16860 134 aa7.01□□□□□ -1.29
VPS50-212ENST00000476413 SLC5A2P31639 672 aa7.01□□□□□ -1.29
VPS50-212ENST00000476413 PNLIPRP1P54315 467 aa7.01□□□□□ -1.29
VPS50-212ENST00000476413 BIRC3Q13489 604 aa7.01□□□□□ -1.29
VPS50-212ENST00000476413 HS1BP3Q53T59 392 aa7.01□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 135.4 ms