RNA–Protein interactions for RNA: ENST00000469080.5

USP11-206, Transcript of ubiquitin specific peptidase 11, humanhuman

TSL 1 (best)

Gene USP11, Length 3,467 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-206ENST00000469080 PLVAPQ9BX97 442 aa12.92□□□□□ -0.34
USP11-206ENST00000469080 SEMA4AQ9H3S1 761 aa12.92□□□□□ -0.34
USP11-206ENST00000469080 MINDY3Q9H8M7 445 aa12.92□□□□□ -0.34
USP11-206ENST00000469080 SLC12A6Q9UHW9 1150 aa12.92□□□□□ -0.34
USP11-206ENST00000469080 HEY1Q9Y5J3 304 aa12.92□□□□□ -0.34
USP11-206ENST00000469080 MYO7AQ13402 2215 aa12.92□□□□□ -0.34
USP11-206ENST00000469080 WDR91A4D1P6 747 aa12.92□□□□□ -0.34
USP11-206ENST00000469080 F8VP50 259 aa12.92□□□□□ -0.34
USP11-206ENST00000469080 FARP2O94887 1054 aaPredicted RBP12.92□□□□□ -0.34
USP11-206ENST00000469080 CHRNB2P17787 502 aa12.92□□□□□ -0.34
USP11-206ENST00000469080 ADORA2AP29274 412 aa12.92□□□□□ -0.34
USP11-206ENST00000469080 RABGGTBP53611 331 aa12.92□□□□□ -0.34
USP11-206ENST00000469080 JAM2P57087 298 aa12.92□□□□□ -0.34
USP11-206ENST00000469080 CDR2Q01850 454 aa12.92□□□□□ -0.34
USP11-206ENST00000469080 SLC29A2Q14542 456 aa12.92□□□□□ -0.34
USP11-206ENST00000469080 TTLL4Q14679 1199 aa12.92□□□□□ -0.34
USP11-206ENST00000469080 KYNUQ16719 465 aa12.92□□□□□ -0.34
USP11-206ENST00000469080 MTMR14Q8NCE2 650 aa12.92□□□□□ -0.34
USP11-206ENST00000469080 OR6B3Q8NGW1 331 aa12.92□□□□□ -0.34
USP11-206ENST00000469080 ANKRD36BP1Q96IX9 119 aa12.92□□□□□ -0.34
USP11-206ENST00000469080 ANKRD27Q96NW4 1050 aa12.92□□□□□ -0.34
USP11-206ENST00000469080 NAP1L3Q99457 506 aaPredicted RBP12.92□□□□□ -0.34
USP11-206ENST00000469080 RAB17Q9H0T7 212 aa12.92□□□□□ -0.34
USP11-206ENST00000469080 APOBEC3GQ9HC16 384 aaKnown RBP12.92□□□□□ -0.34
USP11-206ENST00000469080 GPATCH2LQ9NWQ4 482 aa12.92□□□□□ -0.34
USP11-206ENST00000469080 SNX9Q9Y5X1 595 aa12.92□□□□□ -0.34
USP11-206ENST00000469080 C11orf97A0A1B0GVM6 126 aaPredicted RBP12.92□□□□□ -0.34
USP11-206ENST00000469080 MAGEA13PA6NCF6 341 aa12.92□□□□□ -0.34
USP11-206ENST00000469080 SPATA31C2B4DYI2 1134 aa12.92□□□□□ -0.34
USP11-206ENST00000469080 M0QYV0 167 aa12.92□□□□□ -0.34
USP11-206ENST00000469080 RARAP10276 462 aa12.92□□□□□ -0.34
USP11-206ENST00000469080 YBX3P16989 372 aaKnown RBP eCLIP12.92□□□□□ -0.341e-6■■□□□ 11.7
USP11-206ENST00000469080 CALB2P22676 271 aa12.92□□□□□ -0.34
USP11-206ENST00000469080 GALK1P51570 392 aa12.92□□□□□ -0.34
USP11-206ENST00000469080 ADARP55265 1226 aaKnown RBP12.92□□□□□ -0.34
USP11-206ENST00000469080 CUL2Q13617 745 aa12.92□□□□□ -0.34
USP11-206ENST00000469080 DUOXA2Q1HG44 320 aa12.92□□□□□ -0.34
USP11-206ENST00000469080 ZNF667Q5HYK9 610 aa12.92□□□□□ -0.34
USP11-206ENST00000469080 DCAF12L1Q5VU92 463 aa12.92□□□□□ -0.34
USP11-206ENST00000469080 LBX2Q6XYB7 198 aa12.92□□□□□ -0.34
USP11-206ENST00000469080 TAS1R3Q7RTX0 852 aa12.92□□□□□ -0.34
USP11-206ENST00000469080 ANKMY2Q8IV38 441 aa12.92□□□□□ -0.34
USP11-206ENST00000469080 CYP4X1Q8N118 509 aa12.92□□□□□ -0.34
USP11-206ENST00000469080 KIF12Q96FN5 646 aa12.92□□□□□ -0.34
USP11-206ENST00000469080 OSMRQ99650 979 aa12.92□□□□□ -0.34
USP11-206ENST00000469080 PSMA2P25787 234 aa12.91□□□□□ -0.34
USP11-206ENST00000469080 ADORA2BP29275 332 aa12.91□□□□□ -0.34
USP11-206ENST00000469080 POLR2BP30876 1174 aaKnown RBP12.91□□□□□ -0.34
USP11-206ENST00000469080 PSMC1P62191 440 aaKnown RBP12.91□□□□□ -0.34
USP11-206ENST00000469080 ALCAMQ13740 583 aa12.91□□□□□ -0.34
USP11-206ENST00000469080 FAXCQ5TGI0 409 aa12.91□□□□□ -0.34
USP11-206ENST00000469080 TTC30AQ86WT1 665 aa12.91□□□□□ -0.34
USP11-206ENST00000469080 PDCD7Q8N8D1 485 aaKnown RBP12.91□□□□□ -0.34
USP11-206ENST00000469080 DNAJC1Q96KC8 554 aaKnown RBP12.91□□□□□ -0.34
USP11-206ENST00000469080 GPR88Q9GZN0 384 aa12.91□□□□□ -0.34
USP11-206ENST00000469080 LRRC4CQ9HCJ2 640 aa12.91□□□□□ -0.34
USP11-206ENST00000469080 MAST2Q6P0Q8 1798 aa12.91□□□□□ -0.34
USP11-206ENST00000469080 PDHXO00330 501 aa12.91□□□□□ -0.34
USP11-206ENST00000469080 NVLO15381 856 aaKnown RBP12.91□□□□□ -0.34
USP11-206ENST00000469080 MYL3P08590 195 aa12.91□□□□□ -0.34
USP11-206ENST00000469080 SKIP12755 728 aa12.91□□□□□ -0.34
USP11-206ENST00000469080 TUFMP49411 452 aaKnown RBP12.91□□□□□ -0.34
USP11-206ENST00000469080 ARMCX2Q7L311 632 aa12.91□□□□□ -0.34
USP11-206ENST00000469080 KIAA0319LQ8IZA0 1049 aa12.91□□□□□ -0.34
USP11-206ENST00000469080 C12orf29Q8N999 325 aa12.91□□□□□ -0.34
USP11-206ENST00000469080 HELQQ8TDG4 1101 aa12.91□□□□□ -0.34
USP11-206ENST00000469080 TRAF3IP1Q8TDR0 691 aaPredicted RBP12.91□□□□□ -0.34
USP11-206ENST00000469080 EPS8L3Q8TE67 593 aaKnown RBP12.91□□□□□ -0.34
USP11-206ENST00000469080 HAPLN2Q9GZV7 340 aa12.91□□□□□ -0.34
USP11-206ENST00000469080 RNPEPL1Q9HAU8 725 aa12.91□□□□□ -0.34
USP11-206ENST00000469080 ETNK1Q9HBU6 452 aa12.91□□□□□ -0.34
USP11-206ENST00000469080 CISHQ9NSE2 258 aa12.91□□□□□ -0.34
USP11-206ENST00000469080 EFR3BQ9Y2G0 817 aa12.91□□□□□ -0.34
USP11-206ENST00000469080 CCDC160A6NGH7 325 aa12.9□□□□□ -0.34
USP11-206ENST00000469080 STAM2O75886 525 aa12.9□□□□□ -0.34
USP11-206ENST00000469080 ITGA2BP08514 1039 aa12.9□□□□□ -0.34
USP11-206ENST00000469080 PRKCIP41743 596 aa12.9□□□□□ -0.34
USP11-206ENST00000469080 PTDSS1P48651 473 aaKnown RBP12.9□□□□□ -0.34
USP11-206ENST00000469080 COPS2P61201 443 aa12.9□□□□□ -0.34
USP11-206ENST00000469080 SEPT7Q16181 437 aaKnown RBP12.9□□□□□ -0.34
USP11-206ENST00000469080 C6orf183Q5T699 404 aa12.9□□□□□ -0.34
USP11-206ENST00000469080 LRRC57Q8N9N7 239 aa12.9□□□□□ -0.34
USP11-206ENST00000469080 GADD45GIP1Q8TAE8 222 aaPredicted RBP12.9□□□□□ -0.34
USP11-206ENST00000469080 ZNF606Q8WXB4 792 aa12.9□□□□□ -0.34
USP11-206ENST00000469080 PTPRN2Q92932 1015 aa12.9□□□□□ -0.34
USP11-206ENST00000469080 NMD3Q96D46 503 aaKnown RBP12.9□□□□□ -0.34
USP11-206ENST00000469080 ZSWIM1Q9BR11 485 aa12.9□□□□□ -0.34
USP11-206ENST00000469080 RBPJLQ9UBG7 517 aa12.9□□□□□ -0.34
USP11-206ENST00000469080 PNMA3Q9UL41 463 aa12.9□□□□□ -0.34
USP11-206ENST00000469080 HTR3EA5X5Y0 456 aa12.9□□□□□ -0.34
USP11-206ENST00000469080 BANF1O75531 89 aa12.9□□□□□ -0.34
USP11-206ENST00000469080 RARBP10826 455 aa12.9□□□□□ -0.34
USP11-206ENST00000469080 PHKA2P46019 1235 aa12.9□□□□□ -0.34
USP11-206ENST00000469080 DUS1LQ6P1R4 473 aaKnown RBP12.9□□□□□ -0.34
USP11-206ENST00000469080 CHST13Q8NET6 341 aa12.9□□□□□ -0.34
USP11-206ENST00000469080 CEP70Q8NHQ1 597 aa12.9□□□□□ -0.34
USP11-206ENST00000469080 INIPQ9NRY2 104 aa12.9□□□□□ -0.34
USP11-206ENST00000469080 CROTQ9UKG9 612 aa12.9□□□□□ -0.34
USP11-206ENST00000469080 A0A0J9YVX5 310 aa12.9□□□□□ -0.34
USP11-206ENST00000469080 SPTLC1O15269 473 aa12.9□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms