RNA–Protein interactions for RNA: ENST00000466017.1

VPS41-211, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 4

Gene VPS41, Length 591 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-211ENST00000466017 STX10O60499 249 aa5.94□□□□□ -1.46
VPS41-211ENST00000466017 EXOC3O60645 756 aa5.94□□□□□ -1.46
VPS41-211ENST00000466017 UBOX5O94941 541 aa5.94□□□□□ -1.46
VPS41-211ENST00000466017 PAPLNO95428 1278 aa5.94□□□□□ -1.46
VPS41-211ENST00000466017 PRKCBP05771 671 aa5.94□□□□□ -1.46
VPS41-211ENST00000466017 GJB1P08034 283 aa5.94□□□□□ -1.46
VPS41-211ENST00000466017 DARSP14868 501 aaKnown RBP5.94□□□□□ -1.46
VPS41-211ENST00000466017 CASP4P49662 377 aa5.94□□□□□ -1.46
VPS41-211ENST00000466017 LIG4P49917 911 aa5.94□□□□□ -1.46
VPS41-211ENST00000466017 AP3M2P53677 418 aa5.94□□□□□ -1.46
VPS41-211ENST00000466017 MBTD1Q05BQ5 628 aa5.94□□□□□ -1.46
VPS41-211ENST00000466017 NCBP1Q09161 790 aaKnown RBP5.94□□□□□ -1.46
VPS41-211ENST00000466017 BFSP1Q12934 665 aa5.94□□□□□ -1.46
VPS41-211ENST00000466017 PWP1Q13610 501 aa5.94□□□□□ -1.46
VPS41-211ENST00000466017 ITGA7Q13683 1181 aa5.94□□□□□ -1.46
VPS41-211ENST00000466017 CCDC40Q4G0X9 1142 aa5.94□□□□□ -1.46
VPS41-211ENST00000466017 SPECC1LQ69YQ0 1117 aa5.94□□□□□ -1.46
VPS41-211ENST00000466017 CXCL17Q6UXB2 119 aa5.94□□□□□ -1.46
VPS41-211ENST00000466017 GK5Q6ZS86 529 aa5.94□□□□□ -1.46
VPS41-211ENST00000466017 APBB1IPQ7Z5R6 666 aaPredicted RBP5.94□□□□□ -1.46
VPS41-211ENST00000466017 CD302Q8IX05 232 aa5.94□□□□□ -1.46
VPS41-211ENST00000466017 FAM186BQ8IYM0 893 aa5.94□□□□□ -1.46
VPS41-211ENST00000466017 GPD1LQ8N335 351 aa5.94□□□□□ -1.46
VPS41-211ENST00000466017 METTL13Q8N6R0 699 aa5.94□□□□□ -1.46
VPS41-211ENST00000466017 PARD3BQ8TEW8 1205 aa5.94□□□□□ -1.46
VPS41-211ENST00000466017 TRAPPC12Q8WVT3 735 aa5.94□□□□□ -1.46
VPS41-211ENST00000466017 MRRFQ96E11 262 aaKnown RBP5.94□□□□□ -1.46
VPS41-211ENST00000466017 CCDC51Q96ER9 411 aa5.94□□□□□ -1.46
VPS41-211ENST00000466017 FAXDC2Q96IV6 333 aa5.94□□□□□ -1.46
VPS41-211ENST00000466017 FDXACB1Q9BRP7 624 aaPredicted RBP5.94□□□□□ -1.46
VPS41-211ENST00000466017 CELF4Q9BZC1 486 aaKnown RBP5.94□□□□□ -1.46
VPS41-211ENST00000466017 VPS16Q9H269 839 aa5.94□□□□□ -1.46
VPS41-211ENST00000466017 PLCB1Q9NQ66 1216 aa5.94□□□□□ -1.46
VPS41-211ENST00000466017 CHST12Q9NRB3 414 aa5.94□□□□□ -1.46
VPS41-211ENST00000466017 INTS13Q9NVM9 706 aa5.94□□□□□ -1.46
VPS41-211ENST00000466017 C19orf73Q9NVV2 129 aa5.94□□□□□ -1.46
VPS41-211ENST00000466017 HSPBP1Q9NZL4 362 aa5.94□□□□□ -1.46
VPS41-211ENST00000466017 UTP18Q9Y5J1 556 aaKnown RBP eCLIP5.94□□□□□ -1.46
VPS41-211ENST00000466017 SNX11Q9Y5W9 270 aa5.94□□□□□ -1.46
VPS41-211ENST00000466017 SIP14410 1827 aa5.93□□□□□ -1.46
VPS41-211ENST00000466017 A0A0U1RQG5 324 aaPredicted RBP5.93□□□□□ -1.46
VPS41-211ENST00000466017 A0A1W2PQJ5 194 aa5.93□□□□□ -1.46
VPS41-211ENST00000466017 HNRNPDLO14979 420 aaKnown RBP5.93□□□□□ -1.46
VPS41-211ENST00000466017 OGTO15294 1046 aa5.93□□□□□ -1.46
VPS41-211ENST00000466017 FAM189A1O60320 539 aa5.93□□□□□ -1.46
VPS41-211ENST00000466017 N4BP1O75113 896 aaKnown RBP5.93□□□□□ -1.46
VPS41-211ENST00000466017 PARNO95453 639 aaKnown RBP5.93□□□□□ -1.46
VPS41-211ENST00000466017 SGPL1O95470 568 aa5.93□□□□□ -1.46
VPS41-211ENST00000466017 AFPP02771 609 aaKnown RBP5.93□□□□□ -1.46
VPS41-211ENST00000466017 ESR1P03372 595 aa5.93□□□□□ -1.46
VPS41-211ENST00000466017 SRGAP2CP0DJJ0 459 aa5.93□□□□□ -1.46
VPS41-211ENST00000466017 MCF2P10911 925 aa5.93□□□□□ -1.46
VPS41-211ENST00000466017 KRT13P13646 458 aa5.93□□□□□ -1.46
VPS41-211ENST00000466017 VAMP7P51809 220 aa5.93□□□□□ -1.46
VPS41-211ENST00000466017 NLRP11P59045 1033 aaKnown RBP5.93□□□□□ -1.46
VPS41-211ENST00000466017 IGBP1P78318 339 aa5.93□□□□□ -1.46
VPS41-211ENST00000466017 UBXN1Q04323 297 aa5.93□□□□□ -1.46
VPS41-211ENST00000466017 ZP2Q05996 745 aa5.93□□□□□ -1.46
VPS41-211ENST00000466017 MGAT3Q09327 533 aa5.93□□□□□ -1.46
VPS41-211ENST00000466017 IKZF1Q13422 519 aa5.93□□□□□ -1.46
VPS41-211ENST00000466017 PRPF4BQ13523 1007 aaKnown RBP5.93□□□□□ -1.46
VPS41-211ENST00000466017 PSMD6Q15008 389 aa5.93□□□□□ -1.46
VPS41-211ENST00000466017 TRIM71Q2Q1W2 868 aaKnown RBP5.93□□□□□ -1.46
VPS41-211ENST00000466017 SLC9C1Q4G0N8 1177 aa5.93□□□□□ -1.46
VPS41-211ENST00000466017 FKBP15Q5T1M5 1219 aa5.93□□□□□ -1.46
VPS41-211ENST00000466017 ATF7IP2Q5U623 682 aa5.93□□□□□ -1.46
VPS41-211ENST00000466017 FYB2Q5VWT5 728 aa5.93□□□□□ -1.46
VPS41-211ENST00000466017 MPZL3Q6UWV2 235 aa5.93□□□□□ -1.46
VPS41-211ENST00000466017 CRELD2Q6UXH1 353 aaPredicted RBP5.93□□□□□ -1.46
VPS41-211ENST00000466017 C22orf34Q6ZV56 151 aa5.93□□□□□ -1.46
VPS41-211ENST00000466017 NT5DC4Q86YG4 428 aa5.93□□□□□ -1.46
VPS41-211ENST00000466017 KSR1Q8IVT5 923 aa5.93□□□□□ -1.46
VPS41-211ENST00000466017 BRSK2Q8IWQ3 736 aa5.93□□□□□ -1.46
VPS41-211ENST00000466017 DRC7Q8IY82 874 aa5.93□□□□□ -1.46
VPS41-211ENST00000466017 CYB5D2Q8WUJ1 264 aa5.93□□□□□ -1.46
VPS41-211ENST00000466017 DNAJB3Q8WWF6 145 aa5.93□□□□□ -1.46
VPS41-211ENST00000466017 POMGNT1Q8WZA1 660 aa5.93□□□□□ -1.46
VPS41-211ENST00000466017 SLC35C1Q96A29 364 aa5.93□□□□□ -1.46
VPS41-211ENST00000466017 MISP3Q96FF7 219 aa5.93□□□□□ -1.46
VPS41-211ENST00000466017 ZNF333Q96JL9 665 aa5.93□□□□□ -1.46
VPS41-211ENST00000466017 FAM81BQ96LP2 452 aa5.93□□□□□ -1.46
VPS41-211ENST00000466017 TOX2Q96NM4 488 aa5.93□□□□□ -1.46
VPS41-211ENST00000466017 CBWD1Q9BRT8 395 aa5.93□□□□□ -1.46
VPS41-211ENST00000466017 KIFC3Q9BVG8 833 aa5.93□□□□□ -1.46
VPS41-211ENST00000466017 TARS2Q9BW92 718 aaKnown RBP5.93□□□□□ -1.46
VPS41-211ENST00000466017 TMX1Q9H3N1 280 aa5.93□□□□□ -1.46
VPS41-211ENST00000466017 ASB7Q9H672 318 aa5.93□□□□□ -1.46
VPS41-211ENST00000466017 CARS2Q9HA77 564 aaKnown RBP5.93□□□□□ -1.46
VPS41-211ENST00000466017 PLEKHA5Q9HAU0 1116 aa5.93□□□□□ -1.46
VPS41-211ENST00000466017 TAB2Q9NYJ8 693 aa5.93□□□□□ -1.46
VPS41-211ENST00000466017 CPSF3Q9UKF6 684 aaKnown RBP5.93□□□□□ -1.46
VPS41-211ENST00000466017 AGO2Q9UKV8 859 aaKnown RBP5.93□□□□□ -1.46
VPS41-211ENST00000466017 MYO6Q9UM54 1294 aa5.93□□□□□ -1.46
VPS41-211ENST00000466017 CAPN11Q9UMQ6 739 aa5.93□□□□□ -1.46
VPS41-211ENST00000466017 AKT3Q9Y243 479 aa5.93□□□□□ -1.46
VPS41-211ENST00000466017 SIK3Q9Y2K2 1263 aa5.93□□□□□ -1.46
VPS41-211ENST00000466017 TRPV2Q9Y5S1 764 aa5.93□□□□□ -1.46
VPS41-211ENST00000466017 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP5.93□□□□□ -1.46
VPS41-211ENST00000466017 CNTNAP2Q9UHC6 1331 aa5.93□□□□□ -1.46
VPS41-211ENST00000466017 KBTBD13C9JR72 458 aa5.92□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms