RNA–Protein interactions for RNA: ENST00000439717.2

HSPG2-206, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 2

Gene HSPG2, Length 637 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-206ENST00000439717 SMYD5Q6GMV2 418 aa12.55□□□□□ -0.4
HSPG2-206ENST00000439717 PAQR9Q6ZVX9 377 aa12.55□□□□□ -0.4
HSPG2-206ENST00000439717 ENOSF1Q7L5Y1 443 aa12.55□□□□□ -0.4
HSPG2-206ENST00000439717 FAM35AQ86V20 835 aa12.55□□□□□ -0.4
HSPG2-206ENST00000439717 FUKQ8N0W3 1084 aa12.55□□□□□ -0.4
HSPG2-206ENST00000439717 PPM1KQ8N3J5 372 aa12.55□□□□□ -0.4
HSPG2-206ENST00000439717 UBR7Q8N806 425 aa12.55□□□□□ -0.4
HSPG2-206ENST00000439717 SHKBP1Q8TBC3 707 aa12.55□□□□□ -0.4
HSPG2-206ENST00000439717 SLC2A14Q8TDB8 520 aa12.55□□□□□ -0.4
HSPG2-206ENST00000439717 GPR152Q8TDT2 470 aa12.55□□□□□ -0.4
HSPG2-206ENST00000439717 ING5Q8WYH8 240 aa12.55□□□□□ -0.4
HSPG2-206ENST00000439717 HNRNPABQ99729 332 aaKnown RBP12.55□□□□□ -0.4
HSPG2-206ENST00000439717 NDST4Q9H3R1 872 aa12.55□□□□□ -0.4
HSPG2-206ENST00000439717 ZNF334Q9HCZ1 680 aaPredicted RBP12.55□□□□□ -0.4
HSPG2-206ENST00000439717 NOTCH4Q99466 2003 aa12.55□□□□□ -0.4
HSPG2-206ENST00000439717 A0A1W2PRU2 124 aa12.54□□□□□ -0.4
HSPG2-206ENST00000439717 F8VP50 259 aa12.54□□□□□ -0.4
HSPG2-206ENST00000439717 PI4K2BG5E9Z4 385 aa12.54□□□□□ -0.4
HSPG2-206ENST00000439717 TPM2P07951 284 aa12.54□□□□□ -0.4
HSPG2-206ENST00000439717 CCDC130P13994 396 aa12.54□□□□□ -0.4
HSPG2-206ENST00000439717 DDX6P26196 483 aaKnown RBP eCLIP12.54□□□□□ -0.4
HSPG2-206ENST00000439717 RAD23BP54727 409 aa12.54□□□□□ -0.4
HSPG2-206ENST00000439717 MTMR3Q13615 1198 aa12.54□□□□□ -0.4
HSPG2-206ENST00000439717 TEAD2Q15562 447 aa12.54□□□□□ -0.4
HSPG2-206ENST00000439717 ARHGAP15Q53QZ3 475 aa12.54□□□□□ -0.4
HSPG2-206ENST00000439717 HSP90AA4PQ58FG1 418 aa12.54□□□□□ -0.4
HSPG2-206ENST00000439717 MIIPQ5JXC2 388 aa12.54□□□□□ -0.4
HSPG2-206ENST00000439717 SDHAF4Q5VUM1 108 aa12.54□□□□□ -0.4
HSPG2-206ENST00000439717 ARHGAP17Q68EM7 881 aa12.54□□□□□ -0.4
HSPG2-206ENST00000439717 PHLDB3Q6NSJ2 640 aa12.54□□□□□ -0.4
HSPG2-206ENST00000439717 TRIM65Q6PJ69 517 aa12.54□□□□□ -0.4
HSPG2-206ENST00000439717 DENND5BQ6ZUT9 1274 aa12.54□□□□□ -0.4
HSPG2-206ENST00000439717 GAREM2Q75VX8 874 aa12.54□□□□□ -0.4
HSPG2-206ENST00000439717 UBALD2Q8IYN6 164 aa12.54□□□□□ -0.4
HSPG2-206ENST00000439717 C12orf29Q8N999 325 aa12.54□□□□□ -0.4
HSPG2-206ENST00000439717 SLC4A11Q8NBS3 891 aa12.54□□□□□ -0.4
HSPG2-206ENST00000439717 ANKRD20A12PQ8NF67 263 aa12.54□□□□□ -0.4
HSPG2-206ENST00000439717 MCRS1Q96EZ8 462 aa12.54□□□□□ -0.4
HSPG2-206ENST00000439717 CYFIP2Q96F07 1278 aa12.54□□□□□ -0.4
HSPG2-206ENST00000439717 HEXIM2Q96MH2 286 aaKnown RBP12.54□□□□□ -0.4
HSPG2-206ENST00000439717 FUCA2Q9BTY2 467 aa12.54□□□□□ -0.4
HSPG2-206ENST00000439717 ATXN3LQ9H3M9 355 aa12.54□□□□□ -0.4
HSPG2-206ENST00000439717 KCNK12Q9HB15 430 aa12.54□□□□□ -0.4
HSPG2-206ENST00000439717 IL21Q9HBE4 155 aa12.54□□□□□ -0.4
HSPG2-206ENST00000439717 CSNK1G1Q9HCP0 422 aa12.54□□□□□ -0.4
HSPG2-206ENST00000439717 DMAP1Q9NPF5 467 aaPredicted RBP12.54□□□□□ -0.4
HSPG2-206ENST00000439717 FANCLQ9NW38 375 aa12.54□□□□□ -0.4
HSPG2-206ENST00000439717 MUTYHQ9UIF7 546 aa12.54□□□□□ -0.4
HSPG2-206ENST00000439717 KIAA1257Q9ULG3 409 aa12.54□□□□□ -0.4
HSPG2-206ENST00000439717 SORCS3Q9UPU3 1222 aa12.54□□□□□ -0.4
HSPG2-206ENST00000439717 PTPRDP23468 1912 aa12.53□□□□□ -0.4
HSPG2-206ENST00000439717 SYCE3A1L190 88 aa12.53□□□□□ -0.4
HSPG2-206ENST00000439717 SMTNL1A8MU46 457 aa12.53□□□□□ -0.4
HSPG2-206ENST00000439717 AP1G2O75843 785 aa12.53□□□□□ -0.4
HSPG2-206ENST00000439717 RTN3O95197 1032 aaPredicted RBP12.53□□□□□ -0.4
HSPG2-206ENST00000439717 F11P03951 625 aa12.53□□□□□ -0.4
HSPG2-206ENST00000439717 PAEPP09466 180 aa12.53□□□□□ -0.4
HSPG2-206ENST00000439717 FAM200BP0CF97 657 aa12.53□□□□□ -0.4
HSPG2-206ENST00000439717 ACO1P21399 889 aaKnown RBP12.53□□□□□ -0.4
HSPG2-206ENST00000439717 PON1P27169 355 aa12.53□□□□□ -0.4
HSPG2-206ENST00000439717 WEE1P30291 646 aa12.53□□□□□ -0.4
HSPG2-206ENST00000439717 PPP3CCP48454 512 aa12.53□□□□□ -0.4
HSPG2-206ENST00000439717 CACNA2D1P54289 1103 aa12.53□□□□□ -0.4
HSPG2-206ENST00000439717 TDGQ13569 410 aa12.53□□□□□ -0.4
HSPG2-206ENST00000439717 HTR4Q13639 388 aa12.53□□□□□ -0.4
HSPG2-206ENST00000439717 NCAPHQ15003 741 aa12.53□□□□□ -0.4
HSPG2-206ENST00000439717 ZNF394Q53GI3 561 aa12.53□□□□□ -0.4
HSPG2-206ENST00000439717 RRAGAQ7L523 313 aa12.53□□□□□ -0.4
HSPG2-206ENST00000439717 ARHGEF19Q8IW93 802 aa12.53□□□□□ -0.4
HSPG2-206ENST00000439717 NUP93Q8N1F7 819 aa12.53□□□□□ -0.4
HSPG2-206ENST00000439717 KHSRPQ92945 711 aaKnown RBP eCLIP12.53□□□□□ -0.4
HSPG2-206ENST00000439717 CRACR2AQ9BSW2 395 aa12.53□□□□□ -0.4
HSPG2-206ENST00000439717 TTLL2Q9BWV7 592 aa12.53□□□□□ -0.4
HSPG2-206ENST00000439717 TRPV4Q9HBA0 871 aa12.53□□□□□ -0.4
HSPG2-206ENST00000439717 KRT82Q9NSB4 513 aa12.53□□□□□ -0.4
HSPG2-206ENST00000439717 FAM49BQ9NUQ9 324 aa12.53□□□□□ -0.4
HSPG2-206ENST00000439717 TMEM30AQ9NV96 361 aa12.53□□□□□ -0.4
HSPG2-206ENST00000439717 COMMD8Q9NX08 183 aa12.53□□□□□ -0.4
HSPG2-206ENST00000439717 APEX2Q9UBZ4 518 aa12.53□□□□□ -0.4
HSPG2-206ENST00000439717 MAGED2Q9UNF1 606 aaPredicted RBP12.53□□□□□ -0.4
HSPG2-206ENST00000439717 PCDHB4Q9Y5E5 795 aa12.53□□□□□ -0.4
HSPG2-206ENST00000439717 NUMBLQ9Y6R0 609 aa12.53□□□□□ -0.4
HSPG2-206ENST00000439717 BDP1A6H8Y1 2624 aa12.52□□□□□ -0.4
HSPG2-206ENST00000439717 NRG2O14511 850 aaPredicted RBP12.52□□□□□ -0.41
HSPG2-206ENST00000439717 ECI2O75521 394 aa12.52□□□□□ -0.41
HSPG2-206ENST00000439717 CAVIN2O95810 425 aa12.52□□□□□ -0.41
HSPG2-206ENST00000439717 ASGR2P07307 311 aa12.52□□□□□ -0.41
HSPG2-206ENST00000439717 VDRP11473 427 aa12.52□□□□□ -0.41
HSPG2-206ENST00000439717 ZNF18P17022 549 aa12.52□□□□□ -0.41
HSPG2-206ENST00000439717 GJA1P17302 382 aa12.52□□□□□ -0.41
HSPG2-206ENST00000439717 SLC9A1P19634 815 aa12.52□□□□□ -0.41
HSPG2-206ENST00000439717 ADORA2BP29275 332 aa12.52□□□□□ -0.41
HSPG2-206ENST00000439717 ZNF165P49910 485 aa12.52□□□□□ -0.41
HSPG2-206ENST00000439717 MFAP3P55082 362 aa12.52□□□□□ -0.41
HSPG2-206ENST00000439717 ZXDAP98168 799 aa12.52□□□□□ -0.41
HSPG2-206ENST00000439717 KRT31Q15323 416 aa12.52□□□□□ -0.41
HSPG2-206ENST00000439717 PPP1R26Q5T8A7 1209 aaPredicted RBP12.52□□□□□ -0.41
HSPG2-206ENST00000439717 POTEHQ6S545 545 aa12.52□□□□□ -0.41
HSPG2-206ENST00000439717 TMEM270Q6UE05 265 aa12.52□□□□□ -0.41
HSPG2-206ENST00000439717 PARM1Q6UWI2 310 aa12.52□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 63.5 ms