RNA–Protein interactions for RNA: ENST00000429762.7

VSX1-205, Transcript of visual system homeobox 1, humanhuman

TSL 1 (best) BASIC

Gene VSX1, Length 1,977 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSX1-205ENST00000429762 RTP3Q9BQQ7 232 aa23.29■■□□□ 1.32
VSX1-205ENST00000429762 MED10Q9BTT4 135 aa23.29■■□□□ 1.32
VSX1-205ENST00000429762 MIS12Q9H081 205 aa23.29■■□□□ 1.32
VSX1-205ENST00000429762 PRG3Q9Y2Y8 225 aaPredicted RBP23.29■■□□□ 1.32
VSX1-205ENST00000429762 LOC101059915A0A1B0GWI6 518 aaPredicted RBP23.28■■□□□ 1.32
VSX1-205ENST00000429762 MYBPHLA2RUH7 354 aa23.28■■□□□ 1.32
VSX1-205ENST00000429762 KRIT1O00522 736 aa23.28■■□□□ 1.32
VSX1-205ENST00000429762 ODC1P11926 461 aa23.28■■□□□ 1.32
VSX1-205ENST00000429762 PSMA2P25787 234 aa23.28■■□□□ 1.32
VSX1-205ENST00000429762 OR1G1P47890 313 aa23.28■■□□□ 1.32
VSX1-205ENST00000429762 BCAT1P54687 386 aa23.28■■□□□ 1.32
VSX1-205ENST00000429762 RWDD2BP57060 319 aa23.28■■□□□ 1.32
VSX1-205ENST00000429762 TAF5Q15542 800 aa23.28■■□□□ 1.32
VSX1-205ENST00000429762 CC2D1AQ6P1N0 951 aaPredicted RBP23.28■■□□□ 1.32
VSX1-205ENST00000429762 PAQR9Q6ZVX9 377 aa23.28■■□□□ 1.32
VSX1-205ENST00000429762 TMEM86AQ8N2M4 240 aa23.28■■□□□ 1.32
VSX1-205ENST00000429762 CLEC4CQ8WTT0 213 aa23.28■■□□□ 1.32
VSX1-205ENST00000429762 RSPH1Q8WYR4 309 aa23.28■■□□□ 1.32
VSX1-205ENST00000429762 PAWRQ96IZ0 340 aaKnown RBP23.28■■□□□ 1.32
VSX1-205ENST00000429762 UROC1Q96N76 676 aa23.28■■□□□ 1.32
VSX1-205ENST00000429762 SLC4A5Q9BY07 1137 aa23.28■■□□□ 1.32
VSX1-205ENST00000429762 WDR35Q9P2L0 1181 aa23.28■■□□□ 1.32
VSX1-205ENST00000429762 BEST1O76090 585 aa23.27■■□□□ 1.32
VSX1-205ENST00000429762 LCP1P13796 627 aa23.27■■□□□ 1.32
VSX1-205ENST00000429762 H2AFXP16104 143 aaPredicted RBP23.27■■□□□ 1.32
VSX1-205ENST00000429762 GSCP56915 257 aaPredicted RBP23.27■■□□□ 1.32
VSX1-205ENST00000429762 TAP1Q03518 808 aa23.27■■□□□ 1.32
VSX1-205ENST00000429762 DSC1Q08554 894 aa23.27■■□□□ 1.32
VSX1-205ENST00000429762 SEL1L2Q5TEA6 688 aa23.27■■□□□ 1.32
VSX1-205ENST00000429762 TRNP1Q6NT89 227 aa23.27■■□□□ 1.32
VSX1-205ENST00000429762 DCLRE1AQ6PJP8 1040 aa23.27■■□□□ 1.32
VSX1-205ENST00000429762 SCUBE3Q8IX30 993 aa23.27■■□□□ 1.32
VSX1-205ENST00000429762 COLGALT2Q8IYK4 626 aa23.27■■□□□ 1.32
VSX1-205ENST00000429762 TMEM59LQ9UK28 342 aa23.27■■□□□ 1.32
VSX1-205ENST00000429762 LRFN2Q9ULH4 789 aa23.27■■□□□ 1.32
VSX1-205ENST00000429762 GTF3C5Q9Y5Q8 519 aaPredicted RBP23.27■■□□□ 1.32
VSX1-205ENST00000429762 TCRBV7S2A1N4TA0A589 114 aa23.27■■□□□ 1.32
VSX1-205ENST00000429762 SETSIPP0DME0 302 aa23.27■■□□□ 1.32
VSX1-205ENST00000429762 GJA8P48165 433 aa23.27■■□□□ 1.32
VSX1-205ENST00000429762 LHX1P48742 406 aa23.27■■□□□ 1.32
VSX1-205ENST00000429762 BCAR1P56945 870 aa23.27■■□□□ 1.32
VSX1-205ENST00000429762 VSNL1P62760 191 aa23.27■■□□□ 1.32
VSX1-205ENST00000429762 ATP13A4Q4VNC1 1196 aa23.27■■□□□ 1.32
VSX1-205ENST00000429762 ACSF2Q96CM8 615 aaPredicted RBP23.27■■□□□ 1.32
VSX1-205ENST00000429762 TMEM209Q96SK2 561 aa23.27■■□□□ 1.32
VSX1-205ENST00000429762 RHOBTB2Q9BYZ6 727 aa23.27■■□□□ 1.32
VSX1-205ENST00000429762 PAPSS1O43252 624 aaPredicted RBP23.26■■□□□ 1.31
VSX1-205ENST00000429762 MAN1A1P33908 653 aa23.26■■□□□ 1.31
VSX1-205ENST00000429762 LRRC26Q2I0M4 334 aa23.26■■□□□ 1.31
VSX1-205ENST00000429762 TXNRD3NBQ6F5E7 133 aa23.26■■□□□ 1.31
VSX1-205ENST00000429762 ABI1Q8IZP0 508 aa23.26■■□□□ 1.31
VSX1-205ENST00000429762 FAM193BQ96PV7 902 aaPredicted RBP23.26■■□□□ 1.31
VSX1-205ENST00000429762 HNRNPABQ99729 332 aaKnown RBP23.26■■□□□ 1.31
VSX1-205ENST00000429762 DDX47Q9H0S4 455 aaKnown RBP23.26■■□□□ 1.31
VSX1-205ENST00000429762 MKI67P46013 3256 aaKnown RBP23.26■■□□□ 1.31
VSX1-205ENST00000429762 CLCN6P51797 869 aa23.25■■□□□ 1.31
VSX1-205ENST00000429762 C8orf74Q6P047 294 aa23.25■■□□□ 1.31
VSX1-205ENST00000429762 OLFML1Q6UWY5 402 aa23.25■■□□□ 1.31
VSX1-205ENST00000429762 RHOT1Q8IXI2 618 aa23.25■■□□□ 1.31
VSX1-205ENST00000429762 APBB2Q92870 758 aa23.25■■□□□ 1.31
VSX1-205ENST00000429762 TOX2Q96NM4 488 aa23.25■■□□□ 1.31
VSX1-205ENST00000429762 CASD1Q96PB1 797 aa23.25■■□□□ 1.31
VSX1-205ENST00000429762 DNAI2Q9GZS0 605 aa23.25■■□□□ 1.31
VSX1-205ENST00000429762 TMEM39AQ9NV64 488 aa23.25■■□□□ 1.31
VSX1-205ENST00000429762 TBX21Q9UL17 535 aa23.25■■□□□ 1.31
VSX1-205ENST00000429762 TTC7AQ9ULT0 858 aaPredicted RBP23.25■■□□□ 1.31
VSX1-205ENST00000429762 M0QZQ0 153 aa23.25■■□□□ 1.31
VSX1-205ENST00000429762 CXCL10P02778 98 aa23.25■■□□□ 1.31
VSX1-205ENST00000429762 FAM163BP0C2L3 166 aa23.25■■□□□ 1.31
VSX1-205ENST00000429762 TUBB4BP68371 445 aa23.25■■□□□ 1.31
VSX1-205ENST00000429762 RAB6CQ53S08 254 aa23.25■■□□□ 1.31
VSX1-205ENST00000429762 TMEM110Q86TL2 294 aa23.25■■□□□ 1.31
VSX1-205ENST00000429762 METTL23Q86XA0 190 aa23.25■■□□□ 1.31
VSX1-205ENST00000429762 ZDHHC14Q8IZN3 488 aa23.25■■□□□ 1.31
VSX1-205ENST00000429762 ARFGAP1Q8N6T3 406 aa23.25■■□□□ 1.31
VSX1-205ENST00000429762 NDRG1Q92597 394 aaKnown RBP23.25■■□□□ 1.31
VSX1-205ENST00000429762 HERPUD2Q9BSE4 406 aa23.25■■□□□ 1.31
VSX1-205ENST00000429762 RAB6CQ9H0N0 254 aa23.25■■□□□ 1.31
VSX1-205ENST00000429762 ELAC1Q9H777 363 aaKnown RBP23.25■■□□□ 1.31
VSX1-205ENST00000429762 KRT82Q9NSB4 513 aa23.25■■□□□ 1.31
VSX1-205ENST00000429762 DMGDHQ9UI17 866 aaKnown RBP23.25■■□□□ 1.31
VSX1-205ENST00000429762 FLT3P36888 993 aa23.24■■□□□ 1.31
VSX1-205ENST00000429762 CACNA2D1P54289 1103 aa23.24■■□□□ 1.31
VSX1-205ENST00000429762 PIGHQ14442 188 aaPredicted RBP23.24■■□□□ 1.31
VSX1-205ENST00000429762 LIN28BQ6ZN17 250 aaKnown RBP eCLIP23.24■■□□□ 1.31
VSX1-205ENST00000429762 OR10T2Q8NGX3 314 aa23.24■■□□□ 1.31
VSX1-205ENST00000429762 PCED1BQ96HM7 432 aa23.24■■□□□ 1.31
VSX1-205ENST00000429762 SUSD3Q96L08 255 aa23.24■■□□□ 1.31
VSX1-205ENST00000429762 DUSP16Q9BY84 665 aa23.24■■□□□ 1.31
VSX1-205ENST00000429762 C11orf49Q9H6J7 331 aa23.24■■□□□ 1.31
VSX1-205ENST00000429762 CDH9Q9ULB4 789 aa23.24■■□□□ 1.31
VSX1-205ENST00000429762 TTC3P53804 2025 aa23.24■■□□□ 1.31
VSX1-205ENST00000429762 PI4K2BG5E9Z4 385 aa23.23■■□□□ 1.31
VSX1-205ENST00000429762 PSTPIP1O43586 416 aa23.23■■□□□ 1.31
VSX1-205ENST00000429762 SEC31AO94979 1220 aaKnown RBP23.23■■□□□ 1.31
VSX1-205ENST00000429762 MAP3K7CLP57077 242 aa23.23■■□□□ 1.31
VSX1-205ENST00000429762 SH3PXD2AQ5TCZ1 1133 aa23.23■■□□□ 1.31
VSX1-205ENST00000429762 ANKS1BQ7Z6G8 1248 aa23.23■■□□□ 1.31
VSX1-205ENST00000429762 PIGZQ86VD9 579 aa23.23■■□□□ 1.31
VSX1-205ENST00000429762 NRDE2Q9H7Z3 1164 aa23.23■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 76.7 ms