RNA–Protein interactions for RNA: ENST00000409472.5

SCAMP4-202, Transcript of secretory carrier membrane protein 4, humanhuman

TSL 2 BASIC

Gene SCAMP4, Length 2,394 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-202ENST00000409472 OTUD6BQ8N6M0 293 aa15.97■□□□□ 0.15
SCAMP4-202ENST00000409472 PEBP4Q96S96 227 aa15.97■□□□□ 0.15
SCAMP4-202ENST00000409472 TRIM6Q9C030 488 aaPredicted RBP15.97■□□□□ 0.15
SCAMP4-202ENST00000409472 ADAMTS10Q9H324 1103 aa15.97■□□□□ 0.15
SCAMP4-202ENST00000409472 GBA2Q9HCG7 927 aaPredicted RBP15.97■□□□□ 0.15
SCAMP4-202ENST00000409472 STRIP2Q9ULQ0 834 aa15.97■□□□□ 0.15
SCAMP4-202ENST00000409472 ZNF148Q9UQR1 794 aa15.97■□□□□ 0.15
SCAMP4-202ENST00000409472 SLC45A1Q9Y2W3 748 aa15.97■□□□□ 0.15
SCAMP4-202ENST00000409472 KLHL33A6NCF5 533 aa15.97■□□□□ 0.15
SCAMP4-202ENST00000409472 DYNC1LI2O43237 492 aaPredicted RBP15.97■□□□□ 0.15
SCAMP4-202ENST00000409472 MED7O43513 233 aa15.97■□□□□ 0.15
SCAMP4-202ENST00000409472 GRAP2O75791 330 aa15.97■□□□□ 0.15
SCAMP4-202ENST00000409472 PFKMP08237 780 aa15.97■□□□□ 0.15
SCAMP4-202ENST00000409472 NRLP54845 237 aa15.97■□□□□ 0.15
SCAMP4-202ENST00000409472 GDF10P55107 478 aa15.97■□□□□ 0.15
SCAMP4-202ENST00000409472 FASTKD3Q14CZ7 662 aaKnown RBP15.97■□□□□ 0.15
SCAMP4-202ENST00000409472 OASLQ15646 514 aaKnown RBP15.97■□□□□ 0.15
SCAMP4-202ENST00000409472 SPRYD7Q5W111 196 aa15.97■□□□□ 0.15
SCAMP4-202ENST00000409472 TRMT10CQ7L0Y3 403 aaKnown RBP15.97■□□□□ 0.15
SCAMP4-202ENST00000409472 TAB3Q8N5C8 712 aaPredicted RBP15.97■□□□□ 0.15
SCAMP4-202ENST00000409472 MRPL45Q9BRJ2 306 aaKnown RBP15.97■□□□□ 0.15
SCAMP4-202ENST00000409472 NXF3Q9H4D5 531 aaKnown RBP15.97■□□□□ 0.15
SCAMP4-202ENST00000409472 VRTNQ9H8Y1 702 aa15.97■□□□□ 0.15
SCAMP4-202ENST00000409472 RALGAPA2Q2PPJ7 1873 aa15.96■□□□□ 0.15
SCAMP4-202ENST00000409472 TJP3O95049 919 aa15.96■□□□□ 0.15
SCAMP4-202ENST00000409472 MMP13P45452 471 aa15.96■□□□□ 0.15
SCAMP4-202ENST00000409472 RGS7P49802 495 aa15.96■□□□□ 0.15
SCAMP4-202ENST00000409472 ARSEP51690 589 aa15.96■□□□□ 0.15
SCAMP4-202ENST00000409472 GAD2Q05329 585 aa15.96■□□□□ 0.15
SCAMP4-202ENST00000409472 DGKDQ16760 1214 aa15.96■□□□□ 0.15
SCAMP4-202ENST00000409472 TNFAIP8L3Q5GJ75 292 aa15.96■□□□□ 0.15
SCAMP4-202ENST00000409472 FAM102AQ5T9C2 384 aaPredicted RBP15.96■□□□□ 0.15
SCAMP4-202ENST00000409472 HIBCHQ6NVY1 386 aaPredicted RBP15.96■□□□□ 0.15
SCAMP4-202ENST00000409472 MICALCLQ6ZW33 695 aa15.96■□□□□ 0.15
SCAMP4-202ENST00000409472 PLEKHH3Q7Z736 793 aa15.96■□□□□ 0.15
SCAMP4-202ENST00000409472 ALLCQ8N6M5 410 aa15.96■□□□□ 0.15
SCAMP4-202ENST00000409472 TMEM40Q8WWA1 233 aa15.96■□□□□ 0.15
SCAMP4-202ENST00000409472 FAM49BQ9NUQ9 324 aa15.96■□□□□ 0.15
SCAMP4-202ENST00000409472 TSPAN16Q9UKR8 245 aa15.96■□□□□ 0.15
SCAMP4-202ENST00000409472 HTTP42858 3142 aa15.96■□□□□ 0.15
SCAMP4-202ENST00000409472 E5RJQ4 531 aa15.95■□□□□ 0.14
SCAMP4-202ENST00000409472 GPR32O75388 356 aa15.95■□□□□ 0.14
SCAMP4-202ENST00000409472 BANF1O75531 89 aa15.95■□□□□ 0.14
SCAMP4-202ENST00000409472 CELF2O95319 508 aaKnown RBP15.95■□□□□ 0.14
SCAMP4-202ENST00000409472 TTC4O95801 387 aa15.95■□□□□ 0.14
SCAMP4-202ENST00000409472 FAM107AO95990 144 aa15.95■□□□□ 0.14
SCAMP4-202ENST00000409472 SMIM10L2AP0DMW4 78 aa15.95■□□□□ 0.14
SCAMP4-202ENST00000409472 SMIM10L2BP0DMW5 78 aa15.95■□□□□ 0.14
SCAMP4-202ENST00000409472 ZNF200P98182 395 aaPredicted RBP15.95■□□□□ 0.14
SCAMP4-202ENST00000409472 TAP1Q03518 808 aa15.95■□□□□ 0.14
SCAMP4-202ENST00000409472 INCA1Q0VD86 236 aa15.95■□□□□ 0.14
SCAMP4-202ENST00000409472 SF3A3Q12874 501 aaKnown RBP eCLIP15.95■□□□□ 0.142e-7■■□□□ 14.5
SCAMP4-202ENST00000409472 ZKSCAN8Q15776 578 aaPredicted RBP15.95■□□□□ 0.14
SCAMP4-202ENST00000409472 C15orf59Q2T9L4 293 aaPredicted RBP15.95■□□□□ 0.14
SCAMP4-202ENST00000409472 CCDC89Q8N998 374 aa15.95■□□□□ 0.14
SCAMP4-202ENST00000409472 ATXN2LQ8WWM7 1075 aaKnown RBP15.95■□□□□ 0.14
SCAMP4-202ENST00000409472 TMEM109Q9BVC6 243 aa15.95■□□□□ 0.14
SCAMP4-202ENST00000409472 APOL6Q9BWW8 343 aa15.95■□□□□ 0.14
SCAMP4-202ENST00000409472 ABHD16BQ9H3Z7 469 aa15.95■□□□□ 0.14
SCAMP4-202ENST00000409472 HOMER3Q9NSC5 361 aa15.95■□□□□ 0.14
SCAMP4-202ENST00000409472 C2CD2Q9Y426 696 aa15.95■□□□□ 0.14
SCAMP4-202ENST00000409472 MIPP30301 263 aa15.95■□□□□ 0.14
SCAMP4-202ENST00000409472 ATICP31939 592 aa15.95■□□□□ 0.14
SCAMP4-202ENST00000409472 GRM5P41594 1212 aa15.95■□□□□ 0.14
SCAMP4-202ENST00000409472 CDR1P51861 262 aa15.95■□□□□ 0.14
SCAMP4-202ENST00000409472 VCPP55072 806 aaKnown RBP15.95■□□□□ 0.14
SCAMP4-202ENST00000409472 GPS1Q13098 491 aa15.95■□□□□ 0.14
SCAMP4-202ENST00000409472 MTM1Q13496 603 aa15.95■□□□□ 0.14
SCAMP4-202ENST00000409472 CCL14Q16627 93 aa15.95■□□□□ 0.14
SCAMP4-202ENST00000409472 FAM110CQ1W6H9 321 aa15.95■□□□□ 0.14
SCAMP4-202ENST00000409472 WLSQ5T9L3 541 aa15.95■□□□□ 0.14
SCAMP4-202ENST00000409472 OLFML2BQ68BL8 750 aa15.95■□□□□ 0.14
SCAMP4-202ENST00000409472 FAM183BPQ6ZVS7 135 aa15.95■□□□□ 0.14
SCAMP4-202ENST00000409472 CYP4X1Q8N118 509 aa15.95■□□□□ 0.14
SCAMP4-202ENST00000409472 ACTL9Q8TC94 416 aa15.95■□□□□ 0.14
SCAMP4-202ENST00000409472 HSPH1Q92598 858 aa15.95■□□□□ 0.14
SCAMP4-202ENST00000409472 MCRS1Q96EZ8 462 aa15.95■□□□□ 0.14
SCAMP4-202ENST00000409472 FAM129AQ9BZQ8 928 aa15.95■□□□□ 0.14
SCAMP4-202ENST00000409472 ITGA11Q9UKX5 1188 aa15.95■□□□□ 0.14
SCAMP4-202ENST00000409472 BARX2Q9UMQ3 279 aaPredicted RBP15.95■□□□□ 0.14
SCAMP4-202ENST00000409472 IFNB1P01574 187 aa15.94■□□□□ 0.14
SCAMP4-202ENST00000409472 PECAM1P16284 738 aaPredicted RBP15.94■□□□□ 0.14
SCAMP4-202ENST00000409472 AKAP5P24588 427 aa15.94■□□□□ 0.14
SCAMP4-202ENST00000409472 OTUD4Q01804 1114 aaKnown RBP15.94■□□□□ 0.14
SCAMP4-202ENST00000409472 MMRN1Q13201 1228 aa15.94■□□□□ 0.14
SCAMP4-202ENST00000409472 CYP4F22Q6NT55 531 aa15.94■□□□□ 0.14
SCAMP4-202ENST00000409472 CYP4V2Q6ZWL3 525 aaPredicted RBP15.94■□□□□ 0.14
SCAMP4-202ENST00000409472 EXOC3L1Q86VI1 746 aa15.94■□□□□ 0.14
SCAMP4-202ENST00000409472 PARK7Q99497 189 aaKnown RBP15.94■□□□□ 0.14
SCAMP4-202ENST00000409472 ADPGKQ9BRR6 497 aa15.94■□□□□ 0.14
SCAMP4-202ENST00000409472 SNX9Q9Y5X1 595 aa15.94■□□□□ 0.14
SCAMP4-202ENST00000409472 GMNCA6NCL1 334 aa15.94■□□□□ 0.14
SCAMP4-202ENST00000409472 CST8O60676 142 aa15.94■□□□□ 0.14
SCAMP4-202ENST00000409472 AGTP01019 485 aa15.94■□□□□ 0.14
SCAMP4-202ENST00000409472 PTPN7P35236 360 aa15.94■□□□□ 0.14
SCAMP4-202ENST00000409472 RBP5P82980 135 aa15.94■□□□□ 0.14
SCAMP4-202ENST00000409472 CDO1Q16878 200 aa15.94■□□□□ 0.14
SCAMP4-202ENST00000409472 GOLGA7BQ2TAP0 167 aa15.94■□□□□ 0.14
SCAMP4-202ENST00000409472 C6orf118Q5T5N4 469 aa15.94■□□□□ 0.14
SCAMP4-202ENST00000409472 PPP1R26Q5T8A7 1209 aaPredicted RBP15.94■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms