RNA–Protein interactions for RNA: ENST00000389416.8

PTPRN2-202, Transcript of protein tyrosine phosphatase, receptor type N2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPRN2, Length 4,692 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRN2-202ENST00000389416 ERP44Q9BS26 406 aa13.69□□□□□ -0.22
PTPRN2-202ENST00000389416 ITIH2P19823 946 aa13.69□□□□□ -0.22
PTPRN2-202ENST00000389416 NCKAP1LP55160 1127 aa13.69□□□□□ -0.22
PTPRN2-202ENST00000389416 RTP1P59025 263 aa13.69□□□□□ -0.22
PTPRN2-202ENST00000389416 TMPRSS15P98073 1019 aa13.69□□□□□ -0.22
PTPRN2-202ENST00000389416 CCNI2Q6ZMN8 369 aaPredicted RBP13.69□□□□□ -0.22
PTPRN2-202ENST00000389416 NT5DC4Q86YG4 428 aa13.69□□□□□ -0.22
PTPRN2-202ENST00000389416 SUDS3Q9H7L9 328 aaPredicted RBP13.69□□□□□ -0.22
PTPRN2-202ENST00000389416 TXNRD2Q9NNW7 524 aa13.69□□□□□ -0.22
PTPRN2-202ENST00000389416 SLTMQ9NWH9 1034 aaKnown RBP eCLIP13.69□□□□□ -0.221e-6■■■■□ 22.5
PTPRN2-202ENST00000389416 TRPM3Q9HCF6 1732 aaPredicted RBP13.69□□□□□ -0.22
PTPRN2-202ENST00000389416 CFAP69A5D8W1 941 aa13.69□□□□□ -0.22
PTPRN2-202ENST00000389416 TREHO43280 583 aa13.69□□□□□ -0.22
PTPRN2-202ENST00000389416 RNF135Q8IUD6 432 aa13.69□□□□□ -0.22
PTPRN2-202ENST00000389416 EFHBQ8N7U6 833 aa13.69□□□□□ -0.22
PTPRN2-202ENST00000389416 XPO7Q9UIA9 1087 aaKnown RBP13.69□□□□□ -0.22
PTPRN2-202ENST00000389416 USP18Q9UMW8 372 aa13.69□□□□□ -0.22
PTPRN2-202ENST00000389416 NID2Q14112 1375 aa13.69□□□□□ -0.22
PTPRN2-202ENST00000389416 TLR2O60603 784 aa13.69□□□□□ -0.22
PTPRN2-202ENST00000389416 HMGCRP04035 888 aa13.69□□□□□ -0.22
PTPRN2-202ENST00000389416 SETSIPP0DME0 302 aa13.69□□□□□ -0.22
PTPRN2-202ENST00000389416 TYK2P29597 1187 aa13.69□□□□□ -0.22
PTPRN2-202ENST00000389416 COILP38432 576 aaPredicted RBP13.69□□□□□ -0.22
PTPRN2-202ENST00000389416 C1QBPQ07021 282 aaKnown RBP13.69□□□□□ -0.22
PTPRN2-202ENST00000389416 CRHR2Q13324 411 aa13.69□□□□□ -0.22
PTPRN2-202ENST00000389416 ITGA7Q13683 1181 aa13.69□□□□□ -0.22
PTPRN2-202ENST00000389416 WSCD1Q658N2 575 aa13.69□□□□□ -0.22
PTPRN2-202ENST00000389416 EPM2AIP1Q7L775 607 aaPredicted RBP13.69□□□□□ -0.22
PTPRN2-202ENST00000389416 TAS2R42Q7RTR8 314 aa13.69□□□□□ -0.22
PTPRN2-202ENST00000389416 MRPS31Q92665 395 aaKnown RBP13.69□□□□□ -0.22
PTPRN2-202ENST00000389416 TEPSINQ96N21 525 aa13.69□□□□□ -0.22
PTPRN2-202ENST00000389416 BAIAP2L1Q9UHR4 511 aa13.69□□□□□ -0.22
PTPRN2-202ENST00000389416 TPX2Q9ULW0 747 aaKnown RBP13.69□□□□□ -0.22
PTPRN2-202ENST00000389416 CHMP2BQ9UQN3 213 aa13.69□□□□□ -0.22
PTPRN2-202ENST00000389416 MYO9BQ13459 2157 aa13.68□□□□□ -0.22
PTPRN2-202ENST00000389416 SMPD1P17405 629 aa13.68□□□□□ -0.22
PTPRN2-202ENST00000389416 SPARCL1Q14515 664 aa13.68□□□□□ -0.22
PTPRN2-202ENST00000389416 KYNUQ16719 465 aa13.68□□□□□ -0.22
PTPRN2-202ENST00000389416 ANO4Q32M45 955 aa13.68□□□□□ -0.22
PTPRN2-202ENST00000389416 DDX53Q86TM3 631 aaKnown RBP13.68□□□□□ -0.22
PTPRN2-202ENST00000389416 IPMKQ8NFU5 416 aa13.68□□□□□ -0.22
PTPRN2-202ENST00000389416 ZC3H7BQ9UGR2 993 aaKnown RBP13.68□□□□□ -0.22
PTPRN2-202ENST00000389416 PCDHB12Q9Y5F1 795 aa13.68□□□□□ -0.22
PTPRN2-202ENST00000389416 SLC12A8A0AV02 714 aa13.68□□□□□ -0.22
PTPRN2-202ENST00000389416 MICAL2O94851 1124 aa13.68□□□□□ -0.22
PTPRN2-202ENST00000389416 F9P00740 461 aa13.68□□□□□ -0.22
PTPRN2-202ENST00000389416 NSUN2Q08J23 767 aaKnown RBP eCLIP13.68□□□□□ -0.22
PTPRN2-202ENST00000389416 SYDE1Q6ZW31 735 aaPredicted RBP13.68□□□□□ -0.22
PTPRN2-202ENST00000389416 SLFN11Q7Z7L1 901 aa13.68□□□□□ -0.22
PTPRN2-202ENST00000389416 ARHGAP18Q8N392 663 aa13.68□□□□□ -0.22
PTPRN2-202ENST00000389416 EPS8L1Q8TE68 723 aa13.68□□□□□ -0.22
PTPRN2-202ENST00000389416 TRPM5Q9NZQ8 1165 aa13.68□□□□□ -0.22
PTPRN2-202ENST00000389416 PAK5Q9P286 719 aa13.68□□□□□ -0.22
PTPRN2-202ENST00000389416 GOLGA8RI6L899 631 aa13.68□□□□□ -0.22
PTPRN2-202ENST00000389416 ASGR1P07306 291 aa13.68□□□□□ -0.22
PTPRN2-202ENST00000389416 CCDC130P13994 396 aa13.68□□□□□ -0.22
PTPRN2-202ENST00000389416 TWF1Q12792 350 aa13.68□□□□□ -0.22
PTPRN2-202ENST00000389416 ZACNQ401N2 412 aa13.68□□□□□ -0.22
PTPRN2-202ENST00000389416 MMEL1Q495T6 779 aa13.68□□□□□ -0.22
PTPRN2-202ENST00000389416 RIN2Q8WYP3 895 aaPredicted RBP13.68□□□□□ -0.22
PTPRN2-202ENST00000389416 NXF3Q9H4D5 531 aaKnown RBP13.68□□□□□ -0.22
PTPRN2-202ENST00000389416 MID2Q9UJV3 735 aa13.68□□□□□ -0.22
PTPRN2-202ENST00000389416 PSTPIP1O43586 416 aa13.67□□□□□ -0.22
PTPRN2-202ENST00000389416 CRYBB1P53674 252 aaPredicted RBP13.67□□□□□ -0.22
PTPRN2-202ENST00000389416 ITGA8P53708 1063 aa13.67□□□□□ -0.22
PTPRN2-202ENST00000389416 TPD52P55327 224 aaPredicted RBP13.67□□□□□ -0.22
PTPRN2-202ENST00000389416 LRRC14Q15048 493 aa13.67□□□□□ -0.22
PTPRN2-202ENST00000389416 IRF2BP1Q8IU81 584 aa13.67□□□□□ -0.22
PTPRN2-202ENST00000389416 ADAM32Q8TC27 787 aa13.67□□□□□ -0.22
PTPRN2-202ENST00000389416 ADAM21Q9UKJ8 722 aa13.67□□□□□ -0.22
PTPRN2-202ENST00000389416 AP4E1Q9UPM8 1137 aa13.67□□□□□ -0.22
PTPRN2-202ENST00000389416 CA12O43570 354 aa13.67□□□□□ -0.22
PTPRN2-202ENST00000389416 MBL2P11226 248 aaPredicted RBP13.67□□□□□ -0.22
PTPRN2-202ENST00000389416 BDNFP23560 247 aa13.67□□□□□ -0.22
PTPRN2-202ENST00000389416 ICAM3P32942 547 aa13.67□□□□□ -0.22
PTPRN2-202ENST00000389416 IKBKEQ14164 716 aa13.67□□□□□ -0.22
PTPRN2-202ENST00000389416 BMT2Q1RMZ1 405 aa13.67□□□□□ -0.22
PTPRN2-202ENST00000389416 SH3D19Q5HYK7 790 aa13.67□□□□□ -0.22
PTPRN2-202ENST00000389416 SLC25A41Q8N5S1 370 aa13.67□□□□□ -0.22
PTPRN2-202ENST00000389416 ATP6V0D2Q8N8Y2 350 aa13.67□□□□□ -0.22
PTPRN2-202ENST00000389416 SCG3Q8WXD2 468 aaKnown RBP13.67□□□□□ -0.22
PTPRN2-202ENST00000389416 SLC2A3P11169 496 aa13.67□□□□□ -0.22
PTPRN2-202ENST00000389416 SLC11A2P49281 568 aa13.67□□□□□ -0.22
PTPRN2-202ENST00000389416 ST8SIA6P61647 398 aa13.67□□□□□ -0.22
PTPRN2-202ENST00000389416 CCNYL1Q8N7R7 359 aa13.67□□□□□ -0.22
PTPRN2-202ENST00000389416 OR2W6PQ8NHA6 318 aa13.67□□□□□ -0.22
PTPRN2-202ENST00000389416 MAML1Q92585 1016 aa13.67□□□□□ -0.22
PTPRN2-202ENST00000389416 PCDHB5Q9Y5E4 795 aa13.67□□□□□ -0.22
PTPRN2-202ENST00000389416 E5RI56 91 aa13.67□□□□□ -0.22
PTPRN2-202ENST00000389416 PMPCBO75439 489 aa13.67□□□□□ -0.22
PTPRN2-202ENST00000389416 TFDP3Q5H9I0 405 aa13.67□□□□□ -0.22
PTPRN2-202ENST00000389416 GPATCH11Q8N954 259 aa13.67□□□□□ -0.22
PTPRN2-202ENST00000389416 NUDT5Q9UKK9 219 aa13.67□□□□□ -0.22
PTPRN2-202ENST00000389416 E5RJQ4 531 aa13.66□□□□□ -0.22
PTPRN2-202ENST00000389416 DUSP11O75319 330 aaKnown RBP13.66□□□□□ -0.22
PTPRN2-202ENST00000389416 SPAG7O75391 227 aa13.66□□□□□ -0.22
PTPRN2-202ENST00000389416 KCNA3P22001 575 aa13.66□□□□□ -0.22
PTPRN2-202ENST00000389416 OTUD4Q01804 1114 aaKnown RBP13.66□□□□□ -0.22
PTPRN2-202ENST00000389416 PRKCZQ05513 592 aa13.66□□□□□ -0.22
PTPRN2-202ENST00000389416 CCL14Q16627 93 aa13.66□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 135.5 ms