RNA–Protein interactions for RNA: ENST00000374253.9

CNKSR1-202, Transcript of connector enhancer of kinase suppressor of Ras 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CNKSR1, Length 2,538 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNKSR1-202ENST00000374253 ANKRD42Q8N9B4 389 aa16.8■□□□□ 0.28
CNKSR1-202ENST00000374253 KCTD6Q8NC69 237 aa16.8■□□□□ 0.28
CNKSR1-202ENST00000374253 LRRN4Q8WUT4 740 aa16.8■□□□□ 0.28
CNKSR1-202ENST00000374253 ATXN2LQ8WWM7 1075 aaKnown RBP16.8■□□□□ 0.28
CNKSR1-202ENST00000374253 EMID1Q96A84 441 aaPredicted RBP16.8■□□□□ 0.28
CNKSR1-202ENST00000374253 PEBP4Q96S96 227 aa16.8■□□□□ 0.28
CNKSR1-202ENST00000374253 NXF3Q9H4D5 531 aaKnown RBP16.8■□□□□ 0.28
CNKSR1-202ENST00000374253 INTS9Q9NV88 658 aaKnown RBP16.8■□□□□ 0.28
CNKSR1-202ENST00000374253 GJD2Q9UKL4 321 aa16.8■□□□□ 0.28
CNKSR1-202ENST00000374253 BARX2Q9UMQ3 279 aaPredicted RBP16.8■□□□□ 0.28
CNKSR1-202ENST00000374253 NME7Q9Y5B8 376 aa16.8■□□□□ 0.28
CNKSR1-202ENST00000374253 CELF2O95319 508 aaKnown RBP16.79■□□□□ 0.28
CNKSR1-202ENST00000374253 MAP3K6O95382 1288 aa16.79■□□□□ 0.28
CNKSR1-202ENST00000374253 KDELR1P24390 212 aa16.79■□□□□ 0.28
CNKSR1-202ENST00000374253 MAGEA4P43358 317 aa16.79■□□□□ 0.28
CNKSR1-202ENST00000374253 PPP1R26Q5T8A7 1209 aaPredicted RBP16.79■□□□□ 0.28
CNKSR1-202ENST00000374253 NPNTQ6UXI9 565 aa16.79■□□□□ 0.28
CNKSR1-202ENST00000374253 FAM183BPQ6ZVS7 135 aa16.79■□□□□ 0.28
CNKSR1-202ENST00000374253 PLEKHH3Q7Z736 793 aa16.79■□□□□ 0.28
CNKSR1-202ENST00000374253 RFX6Q8HWS3 928 aa16.79■□□□□ 0.28
CNKSR1-202ENST00000374253 CNOT10Q9H9A5 744 aaKnown RBP16.79■□□□□ 0.28
CNKSR1-202ENST00000374253 KCNK9Q9NPC2 374 aa16.79■□□□□ 0.28
CNKSR1-202ENST00000374253 DDX56Q9NY93 547 aaKnown RBP16.79■□□□□ 0.28
CNKSR1-202ENST00000374253 LOC102724159A0A0B4J2E5 919 aa16.79■□□□□ 0.28
CNKSR1-202ENST00000374253 P4HA1P13674 534 aa16.79■□□□□ 0.28
CNKSR1-202ENST00000374253 PWP2Q15269 919 aaKnown RBP16.79■□□□□ 0.28
CNKSR1-202ENST00000374253 GOLGA7BQ2TAP0 167 aa16.79■□□□□ 0.28
CNKSR1-202ENST00000374253 PNMA8AQ86V59 439 aaPredicted RBP16.79■□□□□ 0.28
CNKSR1-202ENST00000374253 FAM129AQ9BZQ8 928 aa16.79■□□□□ 0.28
CNKSR1-202ENST00000374253 ABHD16BQ9H3Z7 469 aa16.79■□□□□ 0.28
CNKSR1-202ENST00000374253 GBA2Q9HCG7 927 aaPredicted RBP16.79■□□□□ 0.28
CNKSR1-202ENST00000374253 GPATCH2LQ9NWQ4 482 aa16.79■□□□□ 0.28
CNKSR1-202ENST00000374253 MORF4L1Q9UBU8 362 aa16.79■□□□□ 0.28
CNKSR1-202ENST00000374253 DNALI1O14645 258 aaPredicted RBP16.78■□□□□ 0.28
CNKSR1-202ENST00000374253 VDRP11473 427 aa16.78■□□□□ 0.28
CNKSR1-202ENST00000374253 ATICP31939 592 aa16.78■□□□□ 0.28
CNKSR1-202ENST00000374253 GCLCP48506 637 aaPredicted RBP16.78■□□□□ 0.28
CNKSR1-202ENST00000374253 CNGA2Q16280 664 aa16.78■□□□□ 0.28
CNKSR1-202ENST00000374253 HADHQ16836 314 aaKnown RBP16.78■□□□□ 0.28
CNKSR1-202ENST00000374253 ANKMY2Q8IV38 441 aa16.78■□□□□ 0.28
CNKSR1-202ENST00000374253 GTF3C2Q8WUA4 911 aaPredicted RBP16.78■□□□□ 0.28
CNKSR1-202ENST00000374253 CFAP57Q96MR6 1250 aa16.78■□□□□ 0.28
CNKSR1-202ENST00000374253 TMEM109Q9BVC6 243 aa16.78■□□□□ 0.28
CNKSR1-202ENST00000374253 B3GNT5Q9BYG0 378 aa16.78■□□□□ 0.28
CNKSR1-202ENST00000374253 DPEP3Q9H4B8 488 aa16.78■□□□□ 0.28
CNKSR1-202ENST00000374253 FLRT1Q9NZU1 646 aa16.78■□□□□ 0.28
CNKSR1-202ENST00000374253 ITGA11Q9UKX5 1188 aa16.78■□□□□ 0.28
CNKSR1-202ENST00000374253 USP18Q9UMW8 372 aa16.78■□□□□ 0.28
CNKSR1-202ENST00000374253 ATP2C2O75185 946 aa16.78■□□□□ 0.28
CNKSR1-202ENST00000374253 PFKMP08237 780 aa16.78■□□□□ 0.28
CNKSR1-202ENST00000374253 SMIM10L2AP0DMW4 78 aa16.78■□□□□ 0.28
CNKSR1-202ENST00000374253 SMIM10L2BP0DMW5 78 aa16.78■□□□□ 0.28
CNKSR1-202ENST00000374253 BEX3Q00994 111 aa16.78■□□□□ 0.28
CNKSR1-202ENST00000374253 CAV1Q03135 178 aa16.78■□□□□ 0.28
CNKSR1-202ENST00000374253 MYO1EQ12965 1108 aa16.78■□□□□ 0.28
CNKSR1-202ENST00000374253 PMF1Q6P1K2 205 aa16.78■□□□□ 0.28
CNKSR1-202ENST00000374253 SCYL2Q6P3W7 929 aa16.78■□□□□ 0.28
CNKSR1-202ENST00000374253 SCUBE3Q8IX30 993 aa16.78■□□□□ 0.28
CNKSR1-202ENST00000374253 MICALL1Q8N3F8 863 aa16.78■□□□□ 0.28
CNKSR1-202ENST00000374253 C7orf31Q8N865 590 aa16.78■□□□□ 0.28
CNKSR1-202ENST00000374253 TMEM40Q8WWA1 233 aa16.78■□□□□ 0.28
CNKSR1-202ENST00000374253 DNAJB3Q8WWF6 145 aa16.78■□□□□ 0.28
CNKSR1-202ENST00000374253 RXFP2Q8WXD0 754 aa16.78■□□□□ 0.28
CNKSR1-202ENST00000374253 NT5C1AQ9BXI3 368 aa16.78■□□□□ 0.28
CNKSR1-202ENST00000374253 RASSF4Q9H2L5 321 aa16.78■□□□□ 0.28
CNKSR1-202ENST00000374253 ADAMTS10Q9H324 1103 aa16.78■□□□□ 0.28
CNKSR1-202ENST00000374253 GOLGA2P5Q9HBQ8 144 aa16.78■□□□□ 0.28
CNKSR1-202ENST00000374253 C2CD2Q9Y426 696 aa16.78■□□□□ 0.28
CNKSR1-202ENST00000374253 COL1A2P08123 1366 aa16.78■□□□□ 0.28
CNKSR1-202ENST00000374253 TRIP12Q14669 1992 aaPredicted RBP16.78■□□□□ 0.28
CNKSR1-202ENST00000374253 RNF8O76064 485 aa16.77■□□□□ 0.28
CNKSR1-202ENST00000374253 PDGFRBP09619 1106 aa16.77■□□□□ 0.28
CNKSR1-202ENST00000374253 PDGFRAP16234 1089 aa16.77■□□□□ 0.28
CNKSR1-202ENST00000374253 ZNF268Q14587 947 aaPredicted RBP16.77■□□□□ 0.28
CNKSR1-202ENST00000374253 CCL14Q16627 93 aa16.77■□□□□ 0.28
CNKSR1-202ENST00000374253 ANKRD22Q5VYY1 191 aa16.77■□□□□ 0.28
CNKSR1-202ENST00000374253 ANKRD23Q86SG2 305 aa16.77■□□□□ 0.28
CNKSR1-202ENST00000374253 ZC3H18Q86VM9 953 aaKnown RBP16.77■□□□□ 0.28
CNKSR1-202ENST00000374253 ZBED8Q8IZ13 594 aa16.77■□□□□ 0.28
CNKSR1-202ENST00000374253 ZCCHC9Q8N567 271 aaKnown RBP16.77■□□□□ 0.28
CNKSR1-202ENST00000374253 MCRS1Q96EZ8 462 aa16.77■□□□□ 0.28
CNKSR1-202ENST00000374253 TRIM6Q9C030 488 aaPredicted RBP16.77■□□□□ 0.28
CNKSR1-202ENST00000374253 MIS12Q9H081 205 aa16.77■□□□□ 0.28
CNKSR1-202ENST00000374253 CYP3A43Q9HB55 503 aa16.77■□□□□ 0.28
CNKSR1-202ENST00000374253 STAU2Q9NUL3 570 aaKnown RBP eCLIP16.77■□□□□ 0.28
CNKSR1-202ENST00000374253 TPX2Q9ULW0 747 aaKnown RBP16.77■□□□□ 0.28
CNKSR1-202ENST00000374253 TMEM120BA0PK00 339 aa16.77■□□□□ 0.28
CNKSR1-202ENST00000374253 KRT7P08729 469 aa16.77■□□□□ 0.28
CNKSR1-202ENST00000374253 CYP2C9P11712 490 aa16.77■□□□□ 0.28
CNKSR1-202ENST00000374253 DRD4P21917 467 aa16.77■□□□□ 0.28
CNKSR1-202ENST00000374253 GRM5P41594 1212 aa16.77■□□□□ 0.28
CNKSR1-202ENST00000374253 COPS2P61201 443 aa16.77■□□□□ 0.28
CNKSR1-202ENST00000374253 LMNB2Q03252 620 aa16.77■□□□□ 0.28
CNKSR1-202ENST00000374253 TNFAIP8L3Q5GJ75 292 aa16.77■□□□□ 0.28
CNKSR1-202ENST00000374253 SPRYD7Q5W111 196 aa16.77■□□□□ 0.28
CNKSR1-202ENST00000374253 MFSD5Q6N075 450 aa16.77■□□□□ 0.28
CNKSR1-202ENST00000374253 TTC30AQ86WT1 665 aa16.77■□□□□ 0.28
CNKSR1-202ENST00000374253 UNC45BQ8IWX7 931 aa16.77■□□□□ 0.28
CNKSR1-202ENST00000374253 SRRM1Q8IYB3 904 aaKnown RBP16.77■□□□□ 0.28
CNKSR1-202ENST00000374253 CCDC13Q8IYE1 715 aa16.77■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms