RNA–Protein interactions for RNA: ENST00000373019.4

SF3A3-201, Transcript of splicing factor 3a subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SF3A3, Length 3,673 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A3-201ENST00000373019 KBTBD6Q86V97 674 aa9.98□□□□□ -0.81
SF3A3-201ENST00000373019 ZNF713Q8N859 430 aaPredicted RBP9.98□□□□□ -0.81
SF3A3-201ENST00000373019 BANPQ8N9N5 519 aa9.98□□□□□ -0.81
SF3A3-201ENST00000373019 GRIN3AQ8TCU5 1115 aa9.98□□□□□ -0.81
SF3A3-201ENST00000373019 AKT1S1Q96B36 256 aa9.98□□□□□ -0.81
SF3A3-201ENST00000373019 ZNF512Q96ME7 567 aaPredicted RBP9.98□□□□□ -0.81
SF3A3-201ENST00000373019 CFAP57Q96MR6 1250 aa9.98□□□□□ -0.81
SF3A3-201ENST00000373019 PLA2G12BQ9BX93 195 aa9.98□□□□□ -0.81
SF3A3-201ENST00000373019 FHDC1Q9C0D6 1143 aaPredicted RBP9.98□□□□□ -0.81
SF3A3-201ENST00000373019 NARFQ9UHQ1 456 aa9.98□□□□□ -0.81
SF3A3-201ENST00000373019 PADI4Q9UM07 663 aa9.98□□□□□ -0.81
SF3A3-201ENST00000373019 COL1A1P02452 1464 aaPredicted RBP9.98□□□□□ -0.81
SF3A3-201ENST00000373019 GSTTP1A0A1W2PQM5 241 aa9.98□□□□□ -0.81
SF3A3-201ENST00000373019 SULT1C4O75897 302 aa9.98□□□□□ -0.81
SF3A3-201ENST00000373019 ZNF23P17027 643 aa9.98□□□□□ -0.81
SF3A3-201ENST00000373019 CASP4P49662 377 aa9.98□□□□□ -0.81
SF3A3-201ENST00000373019 PHKG1Q16816 387 aa9.98□□□□□ -0.81
SF3A3-201ENST00000373019 LPCAT2Q7L5N7 544 aa9.98□□□□□ -0.81
SF3A3-201ENST00000373019 HEATR3Q7Z4Q2 680 aa9.98□□□□□ -0.81
SF3A3-201ENST00000373019 NEK8Q86SG6 692 aa9.98□□□□□ -0.81
SF3A3-201ENST00000373019 PEX5LQ8IYB4 626 aa9.98□□□□□ -0.81
SF3A3-201ENST00000373019 TTC13Q8NBP0 860 aa9.98□□□□□ -0.81
SF3A3-201ENST00000373019 DCLK3Q9C098 648 aa9.98□□□□□ -0.81
SF3A3-201ENST00000373019 PAIP1Q9H074 479 aaKnown RBP9.98□□□□□ -0.81
SF3A3-201ENST00000373019 TBC1D23Q9NUY8 699 aa9.98□□□□□ -0.81
SF3A3-201ENST00000373019 EMSYQ7Z589 1322 aa9.98□□□□□ -0.81
SF3A3-201ENST00000373019 CSDE1O75534 798 aaKnown RBP9.98□□□□□ -0.81
SF3A3-201ENST00000373019 PIAS1O75925 651 aa9.98□□□□□ -0.81
SF3A3-201ENST00000373019 STAMBPO95630 424 aa9.98□□□□□ -0.81
SF3A3-201ENST00000373019 FTLP02792 175 aaPredicted RBP9.98□□□□□ -0.81
SF3A3-201ENST00000373019 CIITAP33076 1130 aa9.98□□□□□ -0.81
SF3A3-201ENST00000373019 ETV4P43268 484 aa9.98□□□□□ -0.81
SF3A3-201ENST00000373019 CDKL1Q00532 357 aa9.98□□□□□ -0.81
SF3A3-201ENST00000373019 PDK1Q15118 436 aa9.98□□□□□ -0.81
SF3A3-201ENST00000373019 ZNF829Q3KNS6 432 aaPredicted RBP9.98□□□□□ -0.81
SF3A3-201ENST00000373019 SYDE1Q6ZW31 735 aaPredicted RBP9.98□□□□□ -0.81
SF3A3-201ENST00000373019 PRPF39Q86UA1 669 aaKnown RBP9.98□□□□□ -0.81
SF3A3-201ENST00000373019 HELBQ8NG08 1087 aaPredicted RBP9.98□□□□□ -0.81
SF3A3-201ENST00000373019 JDP2Q8WYK2 163 aa9.98□□□□□ -0.81
SF3A3-201ENST00000373019 SOX13Q9UN79 622 aa9.98□□□□□ -0.81
SF3A3-201ENST00000373019 DDX52Q9Y2R4 599 aaKnown RBP eCLIP9.98□□□□□ -0.81
SF3A3-201ENST00000373019 LAMB1P07942 1786 aa9.98□□□□□ -0.81
SF3A3-201ENST00000373019 SLC37A4O43826 429 aa9.97□□□□□ -0.81
SF3A3-201ENST00000373019 PDE8AO60658 829 aa9.97□□□□□ -0.81
SF3A3-201ENST00000373019 CNOT3O75175 753 aaKnown RBP9.97□□□□□ -0.81
SF3A3-201ENST00000373019 NUP107P57740 925 aa9.97□□□□□ -0.81
SF3A3-201ENST00000373019 NSUN2Q08J23 767 aaKnown RBP eCLIP9.97□□□□□ -0.81
SF3A3-201ENST00000373019 KCNJ8Q15842 424 aa9.97□□□□□ -0.81
SF3A3-201ENST00000373019 TICAM1Q8IUC6 712 aa9.97□□□□□ -0.81
SF3A3-201ENST00000373019 ZCCHC9Q8N567 271 aaKnown RBP9.97□□□□□ -0.81
SF3A3-201ENST00000373019 HIPK4Q8NE63 616 aa9.97□□□□□ -0.81
SF3A3-201ENST00000373019 DDHD1Q8NEL9 900 aa9.97□□□□□ -0.81
SF3A3-201ENST00000373019 TBCKQ8TEA7 893 aa9.97□□□□□ -0.81
SF3A3-201ENST00000373019 SNX29Q8TEQ0 813 aa9.97□□□□□ -0.81
SF3A3-201ENST00000373019 SLC20A1Q8WUM9 679 aa9.97□□□□□ -0.81
SF3A3-201ENST00000373019 SLC5A5Q92911 643 aa9.97□□□□□ -0.81
SF3A3-201ENST00000373019 SLC2A11Q9BYW1 496 aa9.97□□□□□ -0.81
SF3A3-201ENST00000373019 SMYD3Q9H7B4 428 aa9.97□□□□□ -0.81
SF3A3-201ENST00000373019 KCNQ5Q9NR82 932 aa9.97□□□□□ -0.81
SF3A3-201ENST00000373019 CNNM1Q9NRU3 951 aa9.97□□□□□ -0.81
SF3A3-201ENST00000373019 IGSF9Q9P2J2 1179 aa9.97□□□□□ -0.81
SF3A3-201ENST00000373019 EBF1Q9UH73 591 aa9.97□□□□□ -0.81
SF3A3-201ENST00000373019 ARHGAP42A6NI28 874 aa9.97□□□□□ -0.81
SF3A3-201ENST00000373019 POTECB2RU33 542 aa9.97□□□□□ -0.81
SF3A3-201ENST00000373019 GOLGA8RI6L899 631 aa9.97□□□□□ -0.81
SF3A3-201ENST00000373019 AQP9O43315 295 aa9.97□□□□□ -0.81
SF3A3-201ENST00000373019 ZBTB11O95625 1053 aaPredicted RBP9.97□□□□□ -0.81
SF3A3-201ENST00000373019 IL1BP01584 269 aa9.97□□□□□ -0.81
SF3A3-201ENST00000373019 FAM58BPP0C7Q3 252 aa9.97□□□□□ -0.81
SF3A3-201ENST00000373019 BGNP21810 368 aa9.97□□□□□ -0.81
SF3A3-201ENST00000373019 PHBP35232 272 aa9.97□□□□□ -0.81
SF3A3-201ENST00000373019 CCNG2Q16589 344 aa9.97□□□□□ -0.81
SF3A3-201ENST00000373019 CYP2A13Q16696 494 aa9.97□□□□□ -0.81
SF3A3-201ENST00000373019 RABGAP1LQ5R372 815 aa9.97□□□□□ -0.81
SF3A3-201ENST00000373019 C6orf52Q5T4I8 152 aa9.97□□□□□ -0.81
SF3A3-201ENST00000373019 IL23RQ5VWK5 629 aa9.97□□□□□ -0.81
SF3A3-201ENST00000373019 IZUMO3Q5VZ72 239 aa9.97□□□□□ -0.81
SF3A3-201ENST00000373019 CES4AQ5XG92 561 aa9.97□□□□□ -0.81
SF3A3-201ENST00000373019 SPTY2D1Q68D10 685 aaPredicted RBP9.97□□□□□ -0.81
SF3A3-201ENST00000373019 INTS5Q6P9B9 1019 aaKnown RBP9.97□□□□□ -0.81
SF3A3-201ENST00000373019 CAPN12Q6ZSI9 719 aa9.97□□□□□ -0.81
SF3A3-201ENST00000373019 DZIP1Q86YF9 867 aaKnown RBP9.97□□□□□ -0.81
SF3A3-201ENST00000373019 ZFPM1Q8IX07 1006 aa9.97□□□□□ -0.81
SF3A3-201ENST00000373019 RAVER1Q8IY67 606 aaKnown RBP9.97□□□□□ -0.81
SF3A3-201ENST00000373019 LARGE2Q8N3Y3 721 aa9.97□□□□□ -0.81
SF3A3-201ENST00000373019 SGF29Q96ES7 293 aa9.97□□□□□ -0.81
SF3A3-201ENST00000373019 KLF6Q99612 283 aaPredicted RBP9.97□□□□□ -0.81
SF3A3-201ENST00000373019 SIAEQ9HAT2 523 aa9.97□□□□□ -0.81
SF3A3-201ENST00000373019 ZFYVE28Q9HCC9 887 aa9.97□□□□□ -0.81
SF3A3-201ENST00000373019 SAYSD1Q9NPB0 183 aa9.97□□□□□ -0.81
SF3A3-201ENST00000373019 IL17RBQ9NRM6 502 aa9.97□□□□□ -0.81
SF3A3-201ENST00000373019 SEPT11Q9NVA2 429 aaKnown RBP9.97□□□□□ -0.81
SF3A3-201ENST00000373019 MAD2L2Q9UI95 211 aa9.97□□□□□ -0.81
SF3A3-201ENST00000373019 BCS1LQ9Y276 419 aa9.97□□□□□ -0.81
SF3A3-201ENST00000373019 ARAP2Q8WZ64 1704 aa9.97□□□□□ -0.81
SF3A3-201ENST00000373019 A0A1B0GUL6 1792 aa9.97□□□□□ -0.81
SF3A3-201ENST00000373019 TM9SF1O15321 606 aa9.97□□□□□ -0.81
SF3A3-201ENST00000373019 SPOPO43791 374 aa9.97□□□□□ -0.81
SF3A3-201ENST00000373019 BAIAP3O94812 1187 aa9.97□□□□□ -0.81
SF3A3-201ENST00000373019 TNFAIP3P21580 790 aa9.97□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms