RNA–Protein interactions for RNA: ENST00000355354.11

CD47-201, Transcript of CD47 molecule, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CD47, Length 5,020 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD47-201ENST00000355354 NDUFAB1O14561 156 aa5.98□□□□□ -1.45
CD47-201ENST00000355354 PI15O43692 258 aa5.98□□□□□ -1.45
CD47-201ENST00000355354 PRSS56P0CW18 603 aa5.98□□□□□ -1.45
CD47-201ENST00000355354 USP11P51784 963 aa5.98□□□□□ -1.45
CD47-201ENST00000355354 GSCP56915 257 aaPredicted RBP5.98□□□□□ -1.45
CD47-201ENST00000355354 BTLAQ7Z6A9 289 aa5.98□□□□□ -1.45
CD47-201ENST00000355354 SP7Q8TDD2 431 aaPredicted RBP5.98□□□□□ -1.45
CD47-201ENST00000355354 NSMCE1Q8WV22 266 aa5.98□□□□□ -1.45
CD47-201ENST00000355354 PGBD4Q96DM1 585 aa5.98□□□□□ -1.45
CD47-201ENST00000355354 PPP1R36Q96LQ0 422 aa5.98□□□□□ -1.45
CD47-201ENST00000355354 SOX17Q9H6I2 414 aaPredicted RBP5.98□□□□□ -1.45
CD47-201ENST00000355354 KRT82Q9NSB4 513 aa5.98□□□□□ -1.45
CD47-201ENST00000355354 ARHGAP28Q9P2N2 729 aa5.98□□□□□ -1.45
CD47-201ENST00000355354 DNAJC12Q9UKB3 198 aa5.98□□□□□ -1.45
CD47-201ENST00000355354 NUDT5Q9UKK9 219 aa5.98□□□□□ -1.45
CD47-201ENST00000355354 USF3Q68DE3 2245 aa5.98□□□□□ -1.45
CD47-201ENST00000355354 DENND3A2RUS2 1198 aa5.98□□□□□ -1.45
CD47-201ENST00000355354 PPFIA4O75335 1185 aa5.98□□□□□ -1.45
CD47-201ENST00000355354 EFEMP2O95967 443 aa5.98□□□□□ -1.45
CD47-201ENST00000355354 MT-CO1P00395 513 aa5.98□□□□□ -1.45
CD47-201ENST00000355354 NR3C1P04150 777 aa5.98□□□□□ -1.45
CD47-201ENST00000355354 CCNFP41002 786 aa5.98□□□□□ -1.45
CD47-201ENST00000355354 IRX4P78413 519 aa5.98□□□□□ -1.45
CD47-201ENST00000355354 BMPR2Q13873 1038 aa5.98□□□□□ -1.45
CD47-201ENST00000355354 DUS1LQ6P1R4 473 aaKnown RBP5.98□□□□□ -1.45
CD47-201ENST00000355354 LMNTD1Q8N9Z9 388 aa5.98□□□□□ -1.45
CD47-201ENST00000355354 AZI2Q9H6S1 392 aa5.98□□□□□ -1.45
CD47-201ENST00000355354 SLC38A10Q9HBR0 1119 aa5.98□□□□□ -1.45
CD47-201ENST00000355354 ATP8A2Q9NTI2 1148 aa5.98□□□□□ -1.45
CD47-201ENST00000355354 SIX4Q9UIU6 781 aa5.98□□□□□ -1.45
CD47-201ENST00000355354 PTGDR2Q9Y5Y4 395 aa5.98□□□□□ -1.45
CD47-201ENST00000355354 TENM1Q9UKZ4 2725 aa5.98□□□□□ -1.45
CD47-201ENST00000355354 EPOPA6NHQ4 379 aa5.98□□□□□ -1.45
CD47-201ENST00000355354 NR1D1P20393 614 aa5.98□□□□□ -1.45
CD47-201ENST00000355354 FSHRP23945 695 aa5.98□□□□□ -1.45
CD47-201ENST00000355354 LIG4P49917 911 aa5.98□□□□□ -1.45
CD47-201ENST00000355354 KCNC3Q14003 757 aa5.98□□□□□ -1.45
CD47-201ENST00000355354 ZNF789Q5FWF6 425 aa5.98□□□□□ -1.45
CD47-201ENST00000355354 TDRD10Q5VZ19 366 aaKnown RBP5.98□□□□□ -1.45
CD47-201ENST00000355354 MIS18BP1Q6P0N0 1132 aa5.98□□□□□ -1.45
CD47-201ENST00000355354 CYB5D1Q6P9G0 228 aa5.98□□□□□ -1.45
CD47-201ENST00000355354 LONP2Q86WA8 852 aa5.98□□□□□ -1.45
CD47-201ENST00000355354 IFT43Q96FT9 208 aa5.98□□□□□ -1.45
CD47-201ENST00000355354 CYYR1Q96J86 154 aa5.98□□□□□ -1.45
CD47-201ENST00000355354 SEC16BQ96JE7 1060 aa5.98□□□□□ -1.45
CD47-201ENST00000355354 SEPT9Q9UHD8 586 aaPredicted RBP5.98□□□□□ -1.45
CD47-201ENST00000355354 DPPA5A6NC42 116 aa5.97□□□□□ -1.45
CD47-201ENST00000355354 C3orf70A6NLC5 250 aaPredicted RBP5.97□□□□□ -1.45
CD47-201ENST00000355354 FAM72CH0Y354 149 aa5.97□□□□□ -1.45
CD47-201ENST00000355354 VWA5AO00534 786 aa5.97□□□□□ -1.45
CD47-201ENST00000355354 GCNT3O95395 438 aa5.97□□□□□ -1.45
CD47-201ENST00000355354 HARSP12081 509 aaKnown RBP5.97□□□□□ -1.45
CD47-201ENST00000355354 TAC1P20366 129 aa5.97□□□□□ -1.45
CD47-201ENST00000355354 PAFAH1B1P43034 410 aa5.97□□□□□ -1.45
CD47-201ENST00000355354 MLLT10P55197 1068 aa5.97□□□□□ -1.45
CD47-201ENST00000355354 AMPD3Q01432 767 aa5.97□□□□□ -1.45
CD47-201ENST00000355354 ACSBG2Q5FVE4 666 aa5.97□□□□□ -1.45
CD47-201ENST00000355354 RALGPS1Q5JS13 557 aa5.97□□□□□ -1.45
CD47-201ENST00000355354 ATXN7L2Q5T6C5 722 aaPredicted RBP5.97□□□□□ -1.45
CD47-201ENST00000355354 ERMARDQ5T6L9 678 aa5.97□□□□□ -1.45
CD47-201ENST00000355354 FAM72AQ5TYM5 149 aa5.97□□□□□ -1.45
CD47-201ENST00000355354 FAM72DQ6L9T8 149 aa5.97□□□□□ -1.45
CD47-201ENST00000355354 UNC13DQ70J99 1090 aa5.97□□□□□ -1.45
CD47-201ENST00000355354 ZNF534Q76KX8 674 aa5.97□□□□□ -1.45
CD47-201ENST00000355354 Q7L0L9 218 aa5.97□□□□□ -1.45
CD47-201ENST00000355354 ALYREFQ86V81 257 aaKnown RBP5.97□□□□□ -1.45
CD47-201ENST00000355354 FAM72BQ86X60 149 aa5.97□□□□□ -1.45
CD47-201ENST00000355354 TRIM22Q8IYM9 498 aa5.97□□□□□ -1.45
CD47-201ENST00000355354 PLD6Q8N2A8 252 aaKnown RBP5.97□□□□□ -1.45
CD47-201ENST00000355354 AGR3Q8TD06 166 aa5.97□□□□□ -1.45
CD47-201ENST00000355354 CPXM1Q96SM3 734 aa5.97□□□□□ -1.45
CD47-201ENST00000355354 GORASP1Q9BQQ3 440 aa5.97□□□□□ -1.45
CD47-201ENST00000355354 XPO7Q9UIA9 1087 aaKnown RBP5.97□□□□□ -1.45
CD47-201ENST00000355354 PI4KAP42356 2102 aa5.97□□□□□ -1.45
CD47-201ENST00000355354 CHD5Q8TDI0 1954 aa5.97□□□□□ -1.45
CD47-201ENST00000355354 PJA2O43164 708 aa5.97□□□□□ -1.45
CD47-201ENST00000355354 SEPT4O43236 478 aa5.97□□□□□ -1.45
CD47-201ENST00000355354 ASNSP08243 561 aa5.97□□□□□ -1.45
CD47-201ENST00000355354 RALAP11233 206 aa5.97□□□□□ -1.45
CD47-201ENST00000355354 MARK3P27448 753 aa5.97□□□□□ -1.45
CD47-201ENST00000355354 GABRB3P28472 473 aa5.97□□□□□ -1.45
CD47-201ENST00000355354 HOXD11P31277 338 aaPredicted RBP5.97□□□□□ -1.45
CD47-201ENST00000355354 ZNF200P98182 395 aaPredicted RBP5.97□□□□□ -1.45
CD47-201ENST00000355354 FKBP3Q00688 224 aaKnown RBP5.97□□□□□ -1.45
CD47-201ENST00000355354 ANKDD1AQ495B1 522 aa5.97□□□□□ -1.45
CD47-201ENST00000355354 ANO7Q6IWH7 933 aa5.97□□□□□ -1.45
CD47-201ENST00000355354 SERAC1Q96JX3 654 aa5.97□□□□□ -1.45
CD47-201ENST00000355354 MBOAT7Q96N66 472 aa5.97□□□□□ -1.45
CD47-201ENST00000355354 SPZ1Q9BXG8 430 aa5.97□□□□□ -1.45
CD47-201ENST00000355354 UBE2OQ9C0C9 1292 aaKnown RBP5.97□□□□□ -1.45
CD47-201ENST00000355354 RNPEPQ9H4A4 650 aa5.97□□□□□ -1.45
CD47-201ENST00000355354 HSFX1Q9UBD0 423 aa5.97□□□□□ -1.45
CD47-201ENST00000355354 DCTN4Q9UJW0 460 aa5.97□□□□□ -1.45
CD47-201ENST00000355354 PALM2-AKAP2B1ALY0 433 aaPredicted RBP5.97□□□□□ -1.45
CD47-201ENST00000355354 HAS3O00219 553 aa5.97□□□□□ -1.45
CD47-201ENST00000355354 TSPAN3O60637 253 aa5.97□□□□□ -1.45
CD47-201ENST00000355354 LYPLA1O75608 230 aaPredicted RBP5.97□□□□□ -1.45
CD47-201ENST00000355354 PRKAR2AP13861 404 aaKnown RBP5.97□□□□□ -1.45
CD47-201ENST00000355354 GGT5P36269 586 aa5.97□□□□□ -1.45
CD47-201ENST00000355354 USP8P40818 1118 aa5.97□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 81.9 ms