RNA–Protein interactions for RNA: ENST00000329231.8

ATPAF1-201, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 2 BASIC

Gene ATPAF1, Length 1,241 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-201ENST00000329231 ELOVL4Q9GZR5 314 aa29.43■■■□□ 2.3
ATPAF1-201ENST00000329231 SDCBP2Q9H190 292 aa29.43■■■□□ 2.3
ATPAF1-201ENST00000329231 OBP2AQ9NY56 170 aa29.43■■■□□ 2.3
ATPAF1-201ENST00000329231 ZNF263O14978 683 aa29.42■■■□□ 2.3
ATPAF1-201ENST00000329231 CCNE1P24864 410 aa29.42■■■□□ 2.3
ATPAF1-201ENST00000329231 PMS1P54277 932 aaKnown RBP29.42■■■□□ 2.3
ATPAF1-201ENST00000329231 SPOPLQ6IQ16 392 aa29.42■■■□□ 2.3
ATPAF1-201ENST00000329231 RSPRY1Q96DX4 576 aa29.42■■■□□ 2.3
ATPAF1-201ENST00000329231 TRPV5Q9NQA5 729 aa29.42■■■□□ 2.3
ATPAF1-201ENST00000329231 SIT1Q9Y3P8 196 aa29.42■■■□□ 2.3
ATPAF1-201ENST00000329231 KANSL1LA0AUZ9 987 aa29.41■■■□□ 2.3
ATPAF1-201ENST00000329231 NOP14P78316 857 aaKnown RBP29.41■■■□□ 2.3
ATPAF1-201ENST00000329231 GPIHBP1Q8IV16 184 aa29.41■■■□□ 2.3
ATPAF1-201ENST00000329231 CMTM8Q8IZV2 173 aa29.41■■■□□ 2.3
ATPAF1-201ENST00000329231 MAB21L3Q8N8X9 362 aa29.41■■■□□ 2.3
ATPAF1-201ENST00000329231 C8orf48Q96LL4 319 aa29.41■■■□□ 2.3
ATPAF1-201ENST00000329231 DDX23Q9BUQ8 820 aaKnown RBP29.41■■■□□ 2.3
ATPAF1-201ENST00000329231 IRF2BPLQ9H1B7 796 aa29.41■■■□□ 2.3
ATPAF1-201ENST00000329231 EHD2Q9NZN4 543 aa29.41■■■□□ 2.3
ATPAF1-201ENST00000329231 NCANO14594 1321 aa29.41■■■□□ 2.3
ATPAF1-201ENST00000329231 ATP8B3O60423 1300 aa29.41■■■□□ 2.3
ATPAF1-201ENST00000329231 TRIM49BA6NDI0 452 aa29.4■■■□□ 2.3
ATPAF1-201ENST00000329231 AVPR1AP37288 418 aa29.4■■■□□ 2.3
ATPAF1-201ENST00000329231 ASPAP45381 313 aa29.4■■■□□ 2.3
ATPAF1-201ENST00000329231 FCHO2Q0JRZ9 810 aa29.4■■■□□ 2.3
ATPAF1-201ENST00000329231 TCF15Q12870 199 aa29.4■■■□□ 2.3
ATPAF1-201ENST00000329231 DENND5BQ6ZUT9 1274 aa29.4■■■□□ 2.3
ATPAF1-201ENST00000329231 MON1AQ86VX9 555 aa29.4■■■□□ 2.3
ATPAF1-201ENST00000329231 UNC93AQ86WB7 457 aa29.4■■■□□ 2.3
ATPAF1-201ENST00000329231 B3GNT5Q9BYG0 378 aa29.4■■■□□ 2.3
ATPAF1-201ENST00000329231 BCO2Q9BYV7 579 aa29.4■■■□□ 2.3
ATPAF1-201ENST00000329231 ZNF518BQ9C0D4 1074 aa29.4■■■□□ 2.3
ATPAF1-201ENST00000329231 HEBP1Q9NRV9 189 aa29.4■■■□□ 2.3
ATPAF1-201ENST00000329231 F8VP50 259 aa29.39■■■□□ 2.3
ATPAF1-201ENST00000329231 CHADO15335 359 aa29.39■■■□□ 2.3
ATPAF1-201ENST00000329231 TRIM21P19474 475 aaKnown RBP29.39■■■□□ 2.3
ATPAF1-201ENST00000329231 MXI1P50539 228 aa29.39■■■□□ 2.3
ATPAF1-201ENST00000329231 NHLH1Q02575 133 aa29.39■■■□□ 2.3
ATPAF1-201ENST00000329231 MORC3Q14149 939 aa29.39■■■□□ 2.3
ATPAF1-201ENST00000329231 TXNDC8Q6A555 127 aa29.39■■■□□ 2.3
ATPAF1-201ENST00000329231 TPRG1Q6ZUI0 275 aa29.39■■■□□ 2.3
ATPAF1-201ENST00000329231 CCDC105Q8IYK2 499 aa29.39■■■□□ 2.3
ATPAF1-201ENST00000329231 CELF5Q8N6W0 485 aaKnown RBP29.39■■■□□ 2.3
ATPAF1-201ENST00000329231 PJA1Q8NG27 643 aa29.39■■■□□ 2.3
ATPAF1-201ENST00000329231 FOXQ1Q9C009 403 aa29.39■■■□□ 2.3
ATPAF1-201ENST00000329231 CYP3A43Q9HB55 503 aa29.39■■■□□ 2.3
ATPAF1-201ENST00000329231 UTP3Q9NQZ2 479 aaKnown RBP eCLIP29.39■■■□□ 2.3
ATPAF1-201ENST00000329231 PRAMEF12O95522 483 aa29.38■■■□□ 2.29
ATPAF1-201ENST00000329231 CD44P16070 742 aaKnown RBP29.38■■■□□ 2.29
ATPAF1-201ENST00000329231 NDST1P52848 882 aa29.38■■■□□ 2.29
ATPAF1-201ENST00000329231 TCERG1LQ5VWI1 586 aa29.38■■■□□ 2.29
ATPAF1-201ENST00000329231 CLEC17AQ6ZS10 378 aa29.38■■■□□ 2.29
ATPAF1-201ENST00000329231 ACOT1Q86TX2 421 aa29.38■■■□□ 2.29
ATPAF1-201ENST00000329231 FBXL13Q8NEE6 735 aa29.38■■■□□ 2.29
ATPAF1-201ENST00000329231 MED10Q9BTT4 135 aa29.38■■■□□ 2.29
ATPAF1-201ENST00000329231 NIF3L1Q9GZT8 377 aa29.38■■■□□ 2.29
ATPAF1-201ENST00000329231 APOBEC3GQ9HC16 384 aaKnown RBP29.38■■■□□ 2.29
ATPAF1-201ENST00000329231 ARMCX3Q9UH62 379 aaPredicted RBP29.38■■■□□ 2.29
ATPAF1-201ENST00000329231 BIN1O00499 593 aa29.37■■■□□ 2.29
ATPAF1-201ENST00000329231 CLDN5O00501 218 aa29.37■■■□□ 2.29
ATPAF1-201ENST00000329231 TADA3O75528 432 aa29.37■■■□□ 2.29
ATPAF1-201ENST00000329231 BMP6P22004 513 aa29.37■■■□□ 2.29
ATPAF1-201ENST00000329231 ARHGAP29Q52LW3 1261 aa29.37■■■□□ 2.29
ATPAF1-201ENST00000329231 DCAF17Q5H9S7 520 aaPredicted RBP29.37■■■□□ 2.29
ATPAF1-201ENST00000329231 KLHL10Q6JEL2 608 aa29.37■■■□□ 2.29
ATPAF1-201ENST00000329231 ZNF852Q6ZMS4 543 aa29.37■■■□□ 2.29
ATPAF1-201ENST00000329231 CRYBG2Q8N1P7 616 aa29.37■■■□□ 2.29
ATPAF1-201ENST00000329231 DTWD2Q8NBA8 298 aa29.37■■■□□ 2.29
ATPAF1-201ENST00000329231 BPIFB1Q8TDL5 484 aa29.37■■■□□ 2.29
ATPAF1-201ENST00000329231 CEP63Q96MT8 703 aa29.37■■■□□ 2.29
ATPAF1-201ENST00000329231 LRRC3BQ96PB8 259 aa29.37■■■□□ 2.29
ATPAF1-201ENST00000329231 NELL2Q99435 816 aa29.37■■■□□ 2.29
ATPAF1-201ENST00000329231 OSBPL6Q9BZF3 934 aa29.37■■■□□ 2.29
ATPAF1-201ENST00000329231 MRPS17Q9Y2R5 130 aaKnown RBP29.37■■■□□ 2.29
ATPAF1-201ENST00000329231 BICDL2A1A5D9 508 aa29.36■■■□□ 2.29
ATPAF1-201ENST00000329231 PPP1R3GB7ZBB8 358 aa29.36■■■□□ 2.29
ATPAF1-201ENST00000329231 DCNP07585 359 aaKnown RBP29.36■■■□□ 2.29
ATPAF1-201ENST00000329231 INCA1Q0VD86 236 aa29.36■■■□□ 2.29
ATPAF1-201ENST00000329231 UBXN2BQ14CS0 331 aa29.36■■■□□ 2.29
ATPAF1-201ENST00000329231 FOXR2Q6PJQ5 311 aa29.36■■■□□ 2.29
ATPAF1-201ENST00000329231 CSGALNACT1Q8TDX6 532 aa29.36■■■□□ 2.29
ATPAF1-201ENST00000329231 FAXDC2Q96IV6 333 aa29.36■■■□□ 2.29
ATPAF1-201ENST00000329231 TTLL2Q9BWV7 592 aa29.36■■■□□ 2.29
ATPAF1-201ENST00000329231 SMG9Q9H0W8 520 aaKnown RBP29.36■■■□□ 2.29
ATPAF1-201ENST00000329231 KIF9Q9HAQ2 790 aa29.36■■■□□ 2.29
ATPAF1-201ENST00000329231 METTL14Q9HCE5 456 aaKnown RBP29.36■■■□□ 2.29
ATPAF1-201ENST00000329231 LTB4R2Q9NPC1 389 aa29.36■■■□□ 2.29
ATPAF1-201ENST00000329231 THG1LQ9NWX6 298 aaKnown RBP29.36■■■□□ 2.29
ATPAF1-201ENST00000329231 RAB20Q9NX57 234 aa29.36■■■□□ 2.29
ATPAF1-201ENST00000329231 NUP210Q8TEM1 1887 aaPredicted RBP29.36■■■□□ 2.29
ATPAF1-201ENST00000329231 PTPRDP23468 1912 aa29.35■■■□□ 2.29
ATPAF1-201ENST00000329231 ARNTLO00327 626 aa29.35■■■□□ 2.29
ATPAF1-201ENST00000329231 MAN2B1O00754 1011 aa29.35■■■□□ 2.29
ATPAF1-201ENST00000329231 CACNA2D1P54289 1103 aa29.35■■■□□ 2.29
ATPAF1-201ENST00000329231 PLCB2Q00722 1185 aa29.35■■■□□ 2.29
ATPAF1-201ENST00000329231 WDR44Q5JSH3 913 aa29.35■■■□□ 2.29
ATPAF1-201ENST00000329231 FILIP1Q7Z7B0 1213 aa29.35■■■□□ 2.29
ATPAF1-201ENST00000329231 FAM35AQ86V20 835 aa29.35■■■□□ 2.29
ATPAF1-201ENST00000329231 TRIML1Q8N9V2 468 aa29.35■■■□□ 2.29
ATPAF1-201ENST00000329231 NELFBQ8WX92 580 aa29.35■■■□□ 2.29
Retrieved 100 of 20,778 RNA–protein pairs in 118.3 ms