RNA–Protein interactions for RNA: ENST00000298564.14

TSPAN17-201, Transcript of tetraspanin 17, humanhuman

TSL 2 BASIC

Gene TSPAN17, Length 2,810 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN17-201ENST00000298564 SLCO2A1Q92959 643 aa18.69■□□□□ 0.58
TSPAN17-201ENST00000298564 TMEM121Q9BTD3 319 aa18.69■□□□□ 0.58
TSPAN17-201ENST00000298564 MAF1Q9H063 256 aa18.69■□□□□ 0.58
TSPAN17-201ENST00000298564 KANSL3Q9P2N6 904 aa18.69■□□□□ 0.58
TSPAN17-201ENST00000298564 HEY2Q9UBP5 337 aa18.69■□□□□ 0.58
TSPAN17-201ENST00000298564 PPP2R3BQ9Y5P8 575 aa18.69■□□□□ 0.58
TSPAN17-201ENST00000298564 CAPN9O14815 690 aa18.69■□□□□ 0.58
TSPAN17-201ENST00000298564 NVLO15381 856 aaKnown RBP18.69■□□□□ 0.58
TSPAN17-201ENST00000298564 TLR3O15455 904 aaKnown RBP18.69■□□□□ 0.58
TSPAN17-201ENST00000298564 MAFO75444 373 aaPredicted RBP18.69■□□□□ 0.58
TSPAN17-201ENST00000298564 DCTN3O75935 186 aa18.69■□□□□ 0.58
TSPAN17-201ENST00000298564 POTEJP0CG39 1038 aa18.69■□□□□ 0.58
TSPAN17-201ENST00000298564 NEFHP12036 1026 aa18.69■□□□□ 0.58
TSPAN17-201ENST00000298564 SP100P23497 879 aaPredicted RBP18.69■□□□□ 0.58
TSPAN17-201ENST00000298564 NRLP54845 237 aa18.69■□□□□ 0.58
TSPAN17-201ENST00000298564 PDK4Q16654 411 aa18.69■□□□□ 0.58
TSPAN17-201ENST00000298564 ACSBG2Q5FVE4 666 aa18.69■□□□□ 0.58
TSPAN17-201ENST00000298564 GADL1Q6ZQY3 521 aa18.69■□□□□ 0.58
TSPAN17-201ENST00000298564 TRIM50Q86XT4 487 aa18.69■□□□□ 0.58
TSPAN17-201ENST00000298564 ZNF606Q8WXB4 792 aa18.69■□□□□ 0.58
TSPAN17-201ENST00000298564 SEPT1Q8WYJ6 367 aa18.69■□□□□ 0.58
TSPAN17-201ENST00000298564 SPATC1LQ9H0A9 340 aa18.69■□□□□ 0.58
TSPAN17-201ENST00000298564 MRPL47Q9HD33 250 aaKnown RBP18.69■□□□□ 0.58
TSPAN17-201ENST00000298564 UBTFL6P0CB48 400 aaPredicted RBP18.68■□□□□ 0.58
TSPAN17-201ENST00000298564 EDNRBP24530 442 aa18.68■□□□□ 0.58
TSPAN17-201ENST00000298564 PTP4A2Q12974 167 aa18.68■□□□□ 0.58
TSPAN17-201ENST00000298564 SEPT7Q16181 437 aaKnown RBP18.68■□□□□ 0.58
TSPAN17-201ENST00000298564 ZNF394Q53GI3 561 aa18.68■□□□□ 0.58
TSPAN17-201ENST00000298564 FAM160B1Q5W0V3 765 aa18.68■□□□□ 0.58
TSPAN17-201ENST00000298564 TXNRD3NBQ6F5E7 133 aa18.68■□□□□ 0.58
TSPAN17-201ENST00000298564 PHF13Q86YI8 300 aaPredicted RBP18.68■□□□□ 0.58
TSPAN17-201ENST00000298564 CCNJLQ8IV13 435 aa18.68■□□□□ 0.58
TSPAN17-201ENST00000298564 GADD45GIP1Q8TAE8 222 aaPredicted RBP18.68■□□□□ 0.58
TSPAN17-201ENST00000298564 MTMR12Q9C0I1 747 aa18.68■□□□□ 0.58
TSPAN17-201ENST00000298564 CNTN6Q9UQ52 1028 aa18.68■□□□□ 0.58
TSPAN17-201ENST00000298564 WFS1O76024 890 aa18.68■□□□□ 0.58
TSPAN17-201ENST00000298564 RPL7AP62424 266 aaKnown RBP18.68■□□□□ 0.58
TSPAN17-201ENST00000298564 KLF1Q13351 362 aaPredicted RBP18.68■□□□□ 0.58
TSPAN17-201ENST00000298564 TFDP1Q14186 410 aa18.68■□□□□ 0.58
TSPAN17-201ENST00000298564 PLEKHA7Q6IQ23 1121 aa18.68■□□□□ 0.58
TSPAN17-201ENST00000298564 C4orf50Q6ZRC1 276 aa18.68■□□□□ 0.58
TSPAN17-201ENST00000298564 RHOT1Q8IXI2 618 aa18.68■□□□□ 0.58
TSPAN17-201ENST00000298564 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP18.68■□□□□ 0.58
TSPAN17-201ENST00000298564 LRRC71Q8N4P6 559 aa18.68■□□□□ 0.58
TSPAN17-201ENST00000298564 NLGN2Q8NFZ4 835 aa18.68■□□□□ 0.58
TSPAN17-201ENST00000298564 ZNF668Q96K58 619 aaPredicted RBP18.68■□□□□ 0.58
TSPAN17-201ENST00000298564 WASF2Q9Y6W5 498 aa18.68■□□□□ 0.58
TSPAN17-201ENST00000298564 SMAPO00193 183 aa18.67■□□□□ 0.58
TSPAN17-201ENST00000298564 MSCO60682 206 aa18.67■□□□□ 0.58
TSPAN17-201ENST00000298564 TCEA3O75764 348 aa18.67■□□□□ 0.58
TSPAN17-201ENST00000298564 ZCCHC18P0CG32 403 aa18.67■□□□□ 0.58
TSPAN17-201ENST00000298564 SERPINB3P29508 390 aa18.67■□□□□ 0.58
TSPAN17-201ENST00000298564 ZBTB16Q05516 673 aa18.67■□□□□ 0.58
TSPAN17-201ENST00000298564 MAIP1Q8WWC4 291 aa18.67■□□□□ 0.58
TSPAN17-201ENST00000298564 CFAP57Q96MR6 1250 aa18.67■□□□□ 0.58
TSPAN17-201ENST00000298564 IMPG2Q9BZV3 1241 aa18.67■□□□□ 0.58
TSPAN17-201ENST00000298564 POLR2AP24928 1970 aaKnown RBP18.67■□□□□ 0.58
TSPAN17-201ENST00000298564 KIF3CO14782 793 aa18.67■□□□□ 0.58
TSPAN17-201ENST00000298564 TBX10O75333 385 aa18.67■□□□□ 0.58
TSPAN17-201ENST00000298564 ARIH2O95376 493 aa18.67■□□□□ 0.58
TSPAN17-201ENST00000298564 KLRC2P26717 231 aa18.67■□□□□ 0.58
TSPAN17-201ENST00000298564 CALRP27797 417 aaKnown RBP18.67■□□□□ 0.58
TSPAN17-201ENST00000298564 PTPN4P29074 926 aa18.67■□□□□ 0.58
TSPAN17-201ENST00000298564 MYL6P60660 151 aa18.67■□□□□ 0.58
TSPAN17-201ENST00000298564 NR1H3Q13133 447 aa18.67■□□□□ 0.58
TSPAN17-201ENST00000298564 TSNAXIP1Q2TAA8 658 aa18.67■□□□□ 0.58
TSPAN17-201ENST00000298564 RINLQ6ZS11 566 aa18.67■□□□□ 0.58
TSPAN17-201ENST00000298564 BRSK2Q8IWQ3 736 aa18.67■□□□□ 0.58
TSPAN17-201ENST00000298564 TCP10LQ8TDR4 215 aa18.67■□□□□ 0.58
TSPAN17-201ENST00000298564 VCPIP1Q96JH7 1222 aa18.67■□□□□ 0.58
TSPAN17-201ENST00000298564 FAM189A1O60320 539 aa18.66■□□□□ 0.58
TSPAN17-201ENST00000298564 PGK2P07205 417 aa18.66■□□□□ 0.58
TSPAN17-201ENST00000298564 HSDL1Q3SXM5 330 aa18.66■□□□□ 0.58
TSPAN17-201ENST00000298564 FOXB2Q5VYV0 432 aa18.66■□□□□ 0.58
TSPAN17-201ENST00000298564 METTL7BQ6UX53 244 aa18.66■□□□□ 0.58
TSPAN17-201ENST00000298564 ZPBP2Q6X784 338 aa18.66■□□□□ 0.58
TSPAN17-201ENST00000298564 ZCCHC9Q8N567 271 aaKnown RBP18.66■□□□□ 0.58
TSPAN17-201ENST00000298564 TEX9Q8N6V9 391 aa18.66■□□□□ 0.58
TSPAN17-201ENST00000298564 RNF149Q8NC42 400 aa18.66■□□□□ 0.58
TSPAN17-201ENST00000298564 MRPL4Q9BYD3 311 aaKnown RBP18.66■□□□□ 0.58
TSPAN17-201ENST00000298564 SEC23IPQ9Y6Y8 1000 aaKnown RBP18.66■□□□□ 0.58
TSPAN17-201ENST00000298564 GYG2O15488 501 aa18.66■□□□□ 0.58
TSPAN17-201ENST00000298564 PSTPIP1O43586 416 aa18.66■□□□□ 0.58
TSPAN17-201ENST00000298564 TOM1L1O75674 476 aa18.66■□□□□ 0.58
TSPAN17-201ENST00000298564 SNUPNO95149 360 aaKnown RBP18.66■□□□□ 0.58
TSPAN17-201ENST00000298564 ASS1P00966 412 aaKnown RBP18.66■□□□□ 0.58
TSPAN17-201ENST00000298564 LAMTOR4Q0VGL1 99 aa18.66■□□□□ 0.58
TSPAN17-201ENST00000298564 CTC1Q2NKJ3 1217 aa18.66■□□□□ 0.58
TSPAN17-201ENST00000298564 GPC2Q8N158 579 aa18.66■□□□□ 0.58
TSPAN17-201ENST00000298564 FBXO27Q8NI29 283 aa18.66■□□□□ 0.58
TSPAN17-201ENST00000298564 FEZF2Q8TBJ5 459 aa18.66■□□□□ 0.58
TSPAN17-201ENST00000298564 INPP5DQ92835 1189 aa18.66■□□□□ 0.58
TSPAN17-201ENST00000298564 ZNF333Q96JL9 665 aa18.66■□□□□ 0.58
TSPAN17-201ENST00000298564 PARVAQ9NVD7 372 aa18.66■□□□□ 0.58
TSPAN17-201ENST00000298564 LIN7AO14910 233 aaPredicted RBP18.65■□□□□ 0.58
TSPAN17-201ENST00000298564 CETN2P41208 172 aa18.65■□□□□ 0.58
TSPAN17-201ENST00000298564 C1QBPQ07021 282 aaKnown RBP18.65■□□□□ 0.58
TSPAN17-201ENST00000298564 CCNG2Q16589 344 aa18.65■□□□□ 0.58
TSPAN17-201ENST00000298564 MSS51Q4VC12 460 aa18.65■□□□□ 0.58
TSPAN17-201ENST00000298564 MFSD7Q6UXD7 560 aa18.65■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms