RNA–Protein interactions for RNA: ENST00000296129.5

CDCP1-201, Transcript of CUB domain containing protein 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CDCP1, Length 6,006 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCP1-201ENST00000296129 ACTRT1Q8TDG2 376 aa17.92■□□□□ 0.46
CDCP1-201ENST00000296129 SERPINB12Q96P63 405 aa17.92■□□□□ 0.46
CDCP1-201ENST00000296129 CDYLQ9Y232 598 aa17.92■□□□□ 0.46
CDCP1-201ENST00000296129 SYCE1LA8MT33 242 aa17.92■□□□□ 0.46
CDCP1-201ENST00000296129 HNRNPCL1O60812 293 aaKnown RBP17.92■□□□□ 0.46
CDCP1-201ENST00000296129 ARHGEF7Q14155 803 aa17.92■□□□□ 0.46
CDCP1-201ENST00000296129 COLEC11Q9BWP8 271 aa17.92■□□□□ 0.46
CDCP1-201ENST00000296129 LATS2Q9NRM7 1088 aa17.92■□□□□ 0.46
CDCP1-201ENST00000296129 RIC1Q4ADV7 1423 aa17.92■□□□□ 0.46
CDCP1-201ENST00000296129 PFDN1O60925 122 aa17.92■□□□□ 0.46
CDCP1-201ENST00000296129 MAP3K7CLP57077 242 aa17.92■□□□□ 0.46
CDCP1-201ENST00000296129 OTUD4Q01804 1114 aaKnown RBP17.92■□□□□ 0.46
CDCP1-201ENST00000296129 OSMRQ99650 979 aa17.92■□□□□ 0.46
CDCP1-201ENST00000296129 CINPQ9BW66 212 aaPredicted RBP17.92■□□□□ 0.46
CDCP1-201ENST00000296129 FZD1Q9UP38 647 aa17.92■□□□□ 0.46
CDCP1-201ENST00000296129 GTPBP10A4D1E9 387 aaKnown RBP17.92■□□□□ 0.46
CDCP1-201ENST00000296129 PDHXO00330 501 aa17.92■□□□□ 0.46
CDCP1-201ENST00000296129 BCAT1P54687 386 aa17.92■□□□□ 0.46
CDCP1-201ENST00000296129 MYBPC2Q14324 1141 aa17.92■□□□□ 0.46
CDCP1-201ENST00000296129 PDK2Q15119 407 aa17.92■□□□□ 0.46
CDCP1-201ENST00000296129 HASPINQ8TF76 798 aa17.92■□□□□ 0.46
CDCP1-201ENST00000296129 SETD4Q9NVD3 440 aa17.92■□□□□ 0.46
CDCP1-201ENST00000296129 PMPCBO75439 489 aa17.92■□□□□ 0.46
CDCP1-201ENST00000296129 ALDH7A1P49419 539 aaKnown RBP17.92■□□□□ 0.46
CDCP1-201ENST00000296129 ALDH5A1P51649 535 aaPredicted RBP17.92■□□□□ 0.46
CDCP1-201ENST00000296129 PAN2Q504Q3 1202 aaKnown RBP17.92■□□□□ 0.46
CDCP1-201ENST00000296129 ZRANB3Q5FWF4 1079 aa17.92■□□□□ 0.46
CDCP1-201ENST00000296129 SPOCD1Q6ZMY3 1216 aa17.92■□□□□ 0.46
CDCP1-201ENST00000296129 LINC00523Q86TU6 105 aa17.92■□□□□ 0.46
CDCP1-201ENST00000296129 MTBPQ96DY7 904 aa17.92■□□□□ 0.46
CDCP1-201ENST00000296129 TRIM49D1C9J1S8 452 aa17.91■□□□□ 0.46
CDCP1-201ENST00000296129 GRIK5Q16478 980 aa17.91■□□□□ 0.46
CDCP1-201ENST00000296129 FBXO36Q8NEA4 188 aa17.91■□□□□ 0.46
CDCP1-201ENST00000296129 FAM163AQ96GL9 167 aaPredicted RBP17.91■□□□□ 0.46
CDCP1-201ENST00000296129 PKP3Q9Y446 797 aa17.91■□□□□ 0.46
CDCP1-201ENST00000296129 SLC12A3P55017 1021 aa17.91■□□□□ 0.46
CDCP1-201ENST00000296129 RARS2Q5T160 578 aaKnown RBP17.91■□□□□ 0.46
CDCP1-201ENST00000296129 PTRHD1Q6GMV3 140 aaKnown RBP17.91■□□□□ 0.46
CDCP1-201ENST00000296129 SHCBP1Q8NEM2 672 aa17.91■□□□□ 0.46
CDCP1-201ENST00000296129 CEP19Q96LK0 163 aa17.91■□□□□ 0.46
CDCP1-201ENST00000296129 KDM4CQ9H3R0 1056 aa17.91■□□□□ 0.46
CDCP1-201ENST00000296129 WARS2Q9UGM6 360 aaKnown RBP17.91■□□□□ 0.46
CDCP1-201ENST00000296129 TRAF3IP3Q9Y228 551 aa17.91■□□□□ 0.46
CDCP1-201ENST00000296129 SYNDIG1LA6NDD5 238 aa17.91■□□□□ 0.46
CDCP1-201ENST00000296129 LSM8O95777 96 aaKnown RBP17.91■□□□□ 0.46
CDCP1-201ENST00000296129 ENO3P13929 434 aaPredicted RBP17.91■□□□□ 0.46
CDCP1-201ENST00000296129 ATICP31939 592 aa17.91■□□□□ 0.46
CDCP1-201ENST00000296129 FKBP1AP62942 108 aaKnown RBP17.91■□□□□ 0.46
CDCP1-201ENST00000296129 TRPM8Q7Z2W7 1104 aa17.91■□□□□ 0.46
CDCP1-201ENST00000296129 SLFN11Q7Z7L1 901 aa17.91■□□□□ 0.46
CDCP1-201ENST00000296129 RAB42Q8N4Z0 105 aa17.91■□□□□ 0.46
CDCP1-201ENST00000296129 E2F7Q96AV8 911 aa17.91■□□□□ 0.46
CDCP1-201ENST00000296129 GPR63Q9BZJ6 419 aa17.91■□□□□ 0.46
CDCP1-201ENST00000296129 PABPC3Q9H361 631 aaKnown RBP17.91■□□□□ 0.46
CDCP1-201ENST00000296129 USP18Q9UMW8 372 aa17.91■□□□□ 0.46
CDCP1-201ENST00000296129 MYOM1P52179 1685 aa17.91■□□□□ 0.46
CDCP1-201ENST00000296129 ANXA9O76027 345 aa17.91■□□□□ 0.46
CDCP1-201ENST00000296129 PROSCO94903 275 aa17.91■□□□□ 0.46
CDCP1-201ENST00000296129 IL10P22301 178 aa17.91■□□□□ 0.46
CDCP1-201ENST00000296129 VCPP55072 806 aaKnown RBP17.91■□□□□ 0.46
CDCP1-201ENST00000296129 PTGISQ16647 500 aa17.91■□□□□ 0.46
CDCP1-201ENST00000296129 ARMC2Q8NEN0 867 aa17.91■□□□□ 0.46
CDCP1-201ENST00000296129 EML1O00423 815 aa17.91■□□□□ 0.46
CDCP1-201ENST00000296129 INSRRP14616 1297 aa17.91■□□□□ 0.46
CDCP1-201ENST00000296129 PTK6Q13882 451 aa17.91■□□□□ 0.46
CDCP1-201ENST00000296129 GRIK4Q16099 956 aa17.91■□□□□ 0.46
CDCP1-201ENST00000296129 CNPY4Q8N129 248 aa17.91■□□□□ 0.46
CDCP1-201ENST00000296129 EMC1Q8N766 993 aa17.91■□□□□ 0.46
CDCP1-201ENST00000296129 MTIF3Q9H2K0 278 aaKnown RBP17.91■□□□□ 0.46
CDCP1-201ENST00000296129 SNTG2Q9NY99 539 aa17.91■□□□□ 0.46
CDCP1-201ENST00000296129 PCDHGB4Q9UN71 923 aa17.91■□□□□ 0.46
CDCP1-201ENST00000296129 MTO1Q9Y2Z2 717 aaKnown RBP17.91■□□□□ 0.46
CDCP1-201ENST00000296129 ADM5C9JUS6 153 aa17.9■□□□□ 0.46
CDCP1-201ENST00000296129 ZBTB39O15060 712 aa17.9■□□□□ 0.46
CDCP1-201ENST00000296129 DUSP9Q99956 384 aaKnown RBP17.9■□□□□ 0.46
CDCP1-201ENST00000296129 FRMD8Q9BZ67 464 aaPredicted RBP17.9■□□□□ 0.46
CDCP1-201ENST00000296129 BLOC1S4Q9NUP1 217 aa17.9■□□□□ 0.46
CDCP1-201ENST00000296129 KIF1AQ12756 1690 aa17.9■□□□□ 0.46
CDCP1-201ENST00000296129 ADGRA2Q96PE1 1338 aa17.9■□□□□ 0.46
CDCP1-201ENST00000296129 H3BRB1 525 aa17.9■□□□□ 0.46
CDCP1-201ENST00000296129 IRAK1P51617 712 aa17.9■□□□□ 0.46
CDCP1-201ENST00000296129 PTK2BQ14289 1009 aa17.9■□□□□ 0.46
CDCP1-201ENST00000296129 OSBPL1AQ9BXW6 950 aa17.9■□□□□ 0.46
CDCP1-201ENST00000296129 TUT1Q9H6E5 874 aaKnown RBP17.9■□□□□ 0.46
CDCP1-201ENST00000296129 WHRNQ9P202 907 aa17.9■□□□□ 0.46
CDCP1-201ENST00000296129 SNX5Q9Y5X3 404 aa17.9■□□□□ 0.46
CDCP1-201ENST00000296129 FRMPD4Q14CM0 1322 aa17.9■□□□□ 0.46
CDCP1-201ENST00000296129 SMIM22K7EJ46 135 aa17.9■□□□□ 0.46
CDCP1-201ENST00000296129 PTPN11Q06124 597 aaPredicted RBP17.9■□□□□ 0.46
CDCP1-201ENST00000296129 NIPA1Q7RTP0 329 aa17.9■□□□□ 0.46
CDCP1-201ENST00000296129 DTX3LQ8TDB6 740 aa17.9■□□□□ 0.46
CDCP1-201ENST00000296129 BHMTQ93088 406 aa17.9■□□□□ 0.46
CDCP1-201ENST00000296129 H0Y626 953 aa17.9■□□□□ 0.46
CDCP1-201ENST00000296129 SLC2A3P11169 496 aa17.9■□□□□ 0.46
CDCP1-201ENST00000296129 SERPINB4P48594 390 aa17.9■□□□□ 0.46
CDCP1-201ENST00000296129 ABCE1P61221 599 aaKnown RBP17.9■□□□□ 0.46
CDCP1-201ENST00000296129 DNAL1Q4LDG9 190 aa17.9■□□□□ 0.46
CDCP1-201ENST00000296129 WDR93Q6P2C0 686 aa17.9■□□□□ 0.46
CDCP1-201ENST00000296129 SRLQ86TD4 932 aa17.9■□□□□ 0.46
CDCP1-201ENST00000296129 NUP93Q8N1F7 819 aa17.9■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 112.6 ms