RNA–Protein interactions for RNA: ENST00000278833.3

ROM1-201, Transcript of retinal outer segment membrane protein 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene ROM1, Length 1,878 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ROM1-201ENST00000278833 NAT8LQ8N9F0 302 aa26.3■■□□□ 1.8
ROM1-201ENST00000278833 ZIC5Q96T25 663 aa26.3■■□□□ 1.8
ROM1-201ENST00000278833 PSMC3IPQ9P2W1 217 aaPredicted RBP26.3■■□□□ 1.8
ROM1-201ENST00000278833 TBK1Q9UHD2 729 aa26.3■■□□□ 1.8
ROM1-201ENST00000278833 POLIQ9UNA4 740 aa26.3■■□□□ 1.8
ROM1-201ENST00000278833 STARD13Q9Y3M8 1113 aa26.3■■□□□ 1.8
ROM1-201ENST00000278833 PLXNA1Q9UIW2 1896 aa26.3■■□□□ 1.8
ROM1-201ENST00000278833 SGK1O00141 431 aa26.3■■□□□ 1.8
ROM1-201ENST00000278833 AOC2O75106 756 aa26.3■■□□□ 1.8
ROM1-201ENST00000278833 UBOX5O94941 541 aa26.3■■□□□ 1.8
ROM1-201ENST00000278833 ETS1P14921 441 aa26.3■■□□□ 1.8
ROM1-201ENST00000278833 MARK3P27448 753 aa26.3■■□□□ 1.8
ROM1-201ENST00000278833 NCALDP61601 193 aa26.3■■□□□ 1.8
ROM1-201ENST00000278833 PSMC1P62191 440 aaKnown RBP26.3■■□□□ 1.8
ROM1-201ENST00000278833 OTUD4Q01804 1114 aaKnown RBP26.3■■□□□ 1.8
ROM1-201ENST00000278833 TRIM50Q86XT4 487 aa26.3■■□□□ 1.8
ROM1-201ENST00000278833 JOSD2Q8TAC2 188 aa26.3■■□□□ 1.8
ROM1-201ENST00000278833 ACTL9Q8TC94 416 aa26.3■■□□□ 1.8
ROM1-201ENST00000278833 DHRS4Q9BTZ2 278 aa26.3■■□□□ 1.8
ROM1-201ENST00000278833 ASB7Q9H672 318 aa26.3■■□□□ 1.8
ROM1-201ENST00000278833 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP26.29■■□□□ 1.8
ROM1-201ENST00000278833 CILPO75339 1184 aa26.29■■□□□ 1.8
ROM1-201ENST00000278833 IL1R2P27930 398 aa26.29■■□□□ 1.8
ROM1-201ENST00000278833 PCK1P35558 622 aa26.29■■□□□ 1.8
ROM1-201ENST00000278833 PTPN11Q06124 597 aaPredicted RBP26.29■■□□□ 1.8
ROM1-201ENST00000278833 HIF1AQ16665 826 aa26.29■■□□□ 1.8
ROM1-201ENST00000278833 TTC39CQ8N584 583 aa26.29■■□□□ 1.8
ROM1-201ENST00000278833 C1orf127Q8N9H9 656 aa26.29■■□□□ 1.8
ROM1-201ENST00000278833 SLC4A11Q8NBS3 891 aa26.29■■□□□ 1.8
ROM1-201ENST00000278833 TACO1Q9BSH4 297 aaKnown RBP26.29■■□□□ 1.8
ROM1-201ENST00000278833 TMEM121Q9BTD3 319 aa26.29■■□□□ 1.8
ROM1-201ENST00000278833 ASCC2Q9H1I8 757 aaPredicted RBP26.29■■□□□ 1.8
ROM1-201ENST00000278833 TRABDQ9H4I3 376 aa26.29■■□□□ 1.8
ROM1-201ENST00000278833 WDR3Q9UNX4 943 aaKnown RBP eCLIP26.29■■□□□ 1.8
ROM1-201ENST00000278833 AGTPBP1Q9UPW5 1226 aa26.29■■□□□ 1.8
ROM1-201ENST00000278833 DYNC1LI1Q9Y6G9 523 aaKnown RBP26.29■■□□□ 1.8
ROM1-201ENST00000278833 APOC4-APOC2K7ER74 178 aa26.28■■□□□ 1.8
ROM1-201ENST00000278833 PEX10O60683 326 aa26.28■■□□□ 1.8
ROM1-201ENST00000278833 APOC2P02655 101 aa26.28■■□□□ 1.8
ROM1-201ENST00000278833 HMGCRP04035 888 aa26.28■■□□□ 1.8
ROM1-201ENST00000278833 PHBP35232 272 aa26.28■■□□□ 1.8
ROM1-201ENST00000278833 ARL4CP56559 192 aa26.28■■□□□ 1.8
ROM1-201ENST00000278833 NOGQ13253 232 aa26.28■■□□□ 1.8
ROM1-201ENST00000278833 PPIL2Q13356 520 aa26.28■■□□□ 1.8
ROM1-201ENST00000278833 SPARCL1Q14515 664 aa26.28■■□□□ 1.8
ROM1-201ENST00000278833 FASTKD3Q14CZ7 662 aaKnown RBP26.28■■□□□ 1.8
ROM1-201ENST00000278833 GADL1Q6ZQY3 521 aa26.28■■□□□ 1.8
ROM1-201ENST00000278833 LINC01465Q8N7H1 131 aa26.28■■□□□ 1.8
ROM1-201ENST00000278833 ATP11CQ8NB49 1132 aa26.28■■□□□ 1.8
ROM1-201ENST00000278833 GDAP1Q8TB36 358 aa26.28■■□□□ 1.8
ROM1-201ENST00000278833 SDCBP2Q9H190 292 aa26.28■■□□□ 1.8
ROM1-201ENST00000278833 INO80B-WBP1J3KQ70 363 aa26.28■■□□□ 1.8
ROM1-201ENST00000278833 ATP2C2O75185 946 aa26.28■■□□□ 1.8
ROM1-201ENST00000278833 ENDOD1O94919 500 aa26.28■■□□□ 1.8
ROM1-201ENST00000278833 C22orf31O95567 290 aa26.28■■□□□ 1.8
ROM1-201ENST00000278833 CD19P15391 556 aa26.28■■□□□ 1.8
ROM1-201ENST00000278833 FOXN2P32314 431 aa26.28■■□□□ 1.8
ROM1-201ENST00000278833 ZNF484Q5JVG2 852 aa26.28■■□□□ 1.8
ROM1-201ENST00000278833 DHX37Q8IY37 1157 aaKnown RBP26.28■■□□□ 1.8
ROM1-201ENST00000278833 CPT1BQ92523 772 aa26.28■■□□□ 1.8
ROM1-201ENST00000278833 SPATA33Q96N06 139 aa26.28■■□□□ 1.8
ROM1-201ENST00000278833 CPXM1Q96SM3 734 aa26.28■■□□□ 1.8
ROM1-201ENST00000278833 INO80BQ9C086 356 aaPredicted RBP26.28■■□□□ 1.8
ROM1-201ENST00000278833 KCNH4Q9UQ05 1017 aa26.28■■□□□ 1.8
ROM1-201ENST00000278833 B4GALT5O43286 388 aa26.27■■□□□ 1.8
ROM1-201ENST00000278833 CST8O60676 142 aa26.27■■□□□ 1.8
ROM1-201ENST00000278833 ERBB2P04626 1255 aa26.27■■□□□ 1.8
ROM1-201ENST00000278833 CXCL8P10145 99 aa26.27■■□□□ 1.8
ROM1-201ENST00000278833 PHKA2P46019 1235 aa26.27■■□□□ 1.8
ROM1-201ENST00000278833 MYO1EQ12965 1108 aa26.27■■□□□ 1.8
ROM1-201ENST00000278833 PDIA2Q13087 525 aaKnown RBP26.27■■□□□ 1.8
ROM1-201ENST00000278833 PDK4Q16654 411 aa26.27■■□□□ 1.8
ROM1-201ENST00000278833 WLSQ5T9L3 541 aa26.27■■□□□ 1.8
ROM1-201ENST00000278833 ZBED8Q8IZ13 594 aa26.27■■□□□ 1.8
ROM1-201ENST00000278833 KIAA0319LQ8IZA0 1049 aa26.27■■□□□ 1.8
ROM1-201ENST00000278833 SMC6Q96SB8 1091 aa26.27■■□□□ 1.8
ROM1-201ENST00000278833 CLUHO75153 1309 aa26.27■■□□□ 1.8
ROM1-201ENST00000278833 FOXO6A8MYZ6 492 aa26.26■■□□□ 1.79
ROM1-201ENST00000278833 TYROBPO43914 113 aa26.26■■□□□ 1.79
ROM1-201ENST00000278833 VDRP11473 427 aa26.26■■□□□ 1.79
ROM1-201ENST00000278833 P4HA1P13674 534 aa26.26■■□□□ 1.79
ROM1-201ENST00000278833 SLC8A1P32418 973 aa26.26■■□□□ 1.79
ROM1-201ENST00000278833 CTCFP49711 727 aaPredicted RBP26.26■■□□□ 1.79
ROM1-201ENST00000278833 INCA1Q0VD86 236 aa26.26■■□□□ 1.79
ROM1-201ENST00000278833 KLHL38Q2WGJ6 581 aa26.26■■□□□ 1.79
ROM1-201ENST00000278833 FAM228AQ86W67 206 aa26.26■■□□□ 1.79
ROM1-201ENST00000278833 CEP120Q8N960 986 aa26.26■■□□□ 1.79
ROM1-201ENST00000278833 TMEM176AQ96HP8 235 aa26.26■■□□□ 1.79
ROM1-201ENST00000278833 NLRP4Q96MN2 994 aa26.26■■□□□ 1.79
ROM1-201ENST00000278833 MIS12Q9H081 205 aa26.26■■□□□ 1.79
ROM1-201ENST00000278833 METTL5Q9NRN9 209 aaKnown RBP26.26■■□□□ 1.79
ROM1-201ENST00000278833 KLHL14Q9P2G3 628 aa26.26■■□□□ 1.79
ROM1-201ENST00000278833 NXF1Q9UBU9 619 aaKnown RBP26.26■■□□□ 1.79
ROM1-201ENST00000278833 AGAP1Q9UPQ3 857 aa26.26■■□□□ 1.79
ROM1-201ENST00000278833 RALGAPA2Q2PPJ7 1873 aa26.26■■□□□ 1.79
ROM1-201ENST00000278833 A0A1B0GUA9 196 aa26.25■■□□□ 1.79
ROM1-201ENST00000278833 GOLGA8SH3BPF8 625 aa26.25■■□□□ 1.79
ROM1-201ENST00000278833 NFICP08651 508 aa26.25■■□□□ 1.79
ROM1-201ENST00000278833 GEMIN4P57678 1058 aaKnown RBP26.25■■□□□ 1.79
ROM1-201ENST00000278833 GPX6P59796 221 aa26.25■■□□□ 1.79
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms