RNA–Protein interactions for RNA: ENST00000224237.9

VIM-201, Transcript of vimentin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VIM, Length 1,868 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIM-201ENST00000224237 STIM2Q9P246 746 aa19.11■□□□□ 0.65
VIM-201ENST00000224237 KANSL3Q9P2N6 904 aa19.11■□□□□ 0.65
VIM-201ENST00000224237 KIAA0100Q14667 2235 aaKnown RBP19.11■□□□□ 0.65
VIM-201ENST00000224237 TULP2O00295 520 aa19.11■□□□□ 0.65
VIM-201ENST00000224237 SSR1P43307 286 aaKnown RBP19.11■□□□□ 0.65
VIM-201ENST00000224237 RGS7P49802 495 aa19.11■□□□□ 0.65
VIM-201ENST00000224237 CCL23P55773 120 aa19.11■□□□□ 0.65
VIM-201ENST00000224237 TAS2R40P59535 323 aa19.11■□□□□ 0.65
VIM-201ENST00000224237 CLLU1OSQ5K130 101 aa19.11■□□□□ 0.65
VIM-201ENST00000224237 LRRC38Q5VT99 294 aa19.11■□□□□ 0.65
VIM-201ENST00000224237 OR6B2Q6IFH4 312 aa19.11■□□□□ 0.65
VIM-201ENST00000224237 CC2D1AQ6P1N0 951 aaPredicted RBP19.11■□□□□ 0.65
VIM-201ENST00000224237 FAM183BPQ6ZVS7 135 aa19.11■□□□□ 0.65
VIM-201ENST00000224237 KLHL7Q8IXQ5 586 aa19.11■□□□□ 0.65
VIM-201ENST00000224237 KATNAL2Q8IYT4 538 aa19.11■□□□□ 0.65
VIM-201ENST00000224237 ARMC5Q96C12 935 aa19.11■□□□□ 0.65
VIM-201ENST00000224237 SLITRK6Q9H5Y7 841 aa19.11■□□□□ 0.65
VIM-201ENST00000224237 ARFGAP3Q9NP61 516 aa19.11■□□□□ 0.65
VIM-201ENST00000224237 DSEQ9UL01 958 aa19.11■□□□□ 0.65
VIM-201ENST00000224237 ARHGEF37A1IGU5 675 aa19.1■□□□□ 0.65
VIM-201ENST00000224237 DCDC2CA8MYV0 355 aa19.1■□□□□ 0.65
VIM-201ENST00000224237 F8VP50 259 aa19.1■□□□□ 0.65
VIM-201ENST00000224237 PARNO95453 639 aaKnown RBP19.1■□□□□ 0.65
VIM-201ENST00000224237 ACAT1P24752 427 aaKnown RBP19.1■□□□□ 0.65
VIM-201ENST00000224237 SLC8A3P57103 927 aa19.1■□□□□ 0.65
VIM-201ENST00000224237 FAAP100Q0VG06 881 aa19.1■□□□□ 0.65
VIM-201ENST00000224237 NOMO2Q5JPE7 1267 aa19.1■□□□□ 0.65
VIM-201ENST00000224237 DCLRE1AQ6PJP8 1040 aa19.1■□□□□ 0.65
VIM-201ENST00000224237 SLC13A5Q86YT5 568 aaPredicted RBP19.1■□□□□ 0.65
VIM-201ENST00000224237 TOX2Q96NM4 488 aa19.1■□□□□ 0.65
VIM-201ENST00000224237 HIPK3Q9H422 1215 aa19.1■□□□□ 0.65
VIM-201ENST00000224237 DMGDHQ9UI17 866 aaKnown RBP19.1■□□□□ 0.65
VIM-201ENST00000224237 TSC2P49815 1807 aa19.1■□□□□ 0.65
VIM-201ENST00000224237 M0QZQ0 153 aa19.09■□□□□ 0.65
VIM-201ENST00000224237 SART1O43290 800 aaKnown RBP19.09■□□□□ 0.65
VIM-201ENST00000224237 CYP11A1P05108 521 aa19.09■□□□□ 0.65
VIM-201ENST00000224237 PCSK1P29120 753 aa19.09■□□□□ 0.65
VIM-201ENST00000224237 ACADSBP45954 432 aa19.09■□□□□ 0.65
VIM-201ENST00000224237 PLA2G4AP47712 749 aa19.09■□□□□ 0.65
VIM-201ENST00000224237 RPL34P49207 117 aaKnown RBP19.09■□□□□ 0.65
VIM-201ENST00000224237 ACAP1Q15027 740 aa19.09■□□□□ 0.65
VIM-201ENST00000224237 C1orf53Q5VUE5 145 aa19.09■□□□□ 0.65
VIM-201ENST00000224237 METTL23Q86XA0 190 aa19.09■□□□□ 0.65
VIM-201ENST00000224237 HDAC7Q8WUI4 952 aa19.09■□□□□ 0.65
VIM-201ENST00000224237 HSFY1Q96LI6 401 aa19.09■□□□□ 0.65
VIM-201ENST00000224237 SYT15Q9BQS2 421 aa19.09■□□□□ 0.65
VIM-201ENST00000224237 DDX47Q9H0S4 455 aaKnown RBP19.09■□□□□ 0.65
VIM-201ENST00000224237 CDH9Q9ULB4 789 aa19.09■□□□□ 0.65
VIM-201ENST00000224237 MTUS1Q9ULD2 1270 aa19.09■□□□□ 0.65
VIM-201ENST00000224237 TIMM13Q9Y5L4 95 aaPredicted RBP19.09■□□□□ 0.65
VIM-201ENST00000224237 PIK3R2O00459 728 aa19.09■□□□□ 0.65
VIM-201ENST00000224237 ENPP3O14638 875 aa19.09■□□□□ 0.65
VIM-201ENST00000224237 XPO1O14980 1071 aaKnown RBP19.09■□□□□ 0.65
VIM-201ENST00000224237 B4GALT3O60512 393 aa19.09■□□□□ 0.65
VIM-201ENST00000224237 ATP2C2O75185 946 aa19.09■□□□□ 0.65
VIM-201ENST00000224237 TKTP29401 623 aaKnown RBP19.09■□□□□ 0.65
VIM-201ENST00000224237 PLCB3Q01970 1234 aa19.09■□□□□ 0.65
VIM-201ENST00000224237 DSC1Q08554 894 aa19.09■□□□□ 0.65
VIM-201ENST00000224237 PAN2Q504Q3 1202 aaKnown RBP19.09■□□□□ 0.65
VIM-201ENST00000224237 OLFML1Q6UWY5 402 aa19.09■□□□□ 0.65
VIM-201ENST00000224237 FUKQ8N0W3 1084 aa19.09■□□□□ 0.65
VIM-201ENST00000224237 EMC1Q8N766 993 aa19.09■□□□□ 0.65
VIM-201ENST00000224237 EXD1Q8NHP7 514 aa19.09■□□□□ 0.65
VIM-201ENST00000224237 DUSP16Q9BY84 665 aa19.09■□□□□ 0.65
VIM-201ENST00000224237 PCDH10Q9P2E7 1040 aa19.09■□□□□ 0.65
VIM-201ENST00000224237 RAD51CO43502 376 aa19.08■□□□□ 0.65
VIM-201ENST00000224237 HEXIM1O94992 359 aaKnown RBP19.08■□□□□ 0.65
VIM-201ENST00000224237 ZRANB2O95218 330 aaKnown RBP eCLIP19.08■□□□□ 0.65
VIM-201ENST00000224237 NPR3P17342 541 aa19.08■□□□□ 0.65
VIM-201ENST00000224237 CYP2C18P33260 490 aa19.08■□□□□ 0.65
VIM-201ENST00000224237 SLC7A5Q01650 507 aa19.08■□□□□ 0.65
VIM-201ENST00000224237 SLC6A3Q01959 620 aa19.08■□□□□ 0.65
VIM-201ENST00000224237 CCDC142Q17RM4 750 aa19.08■□□□□ 0.65
VIM-201ENST00000224237 MAP9Q49MG5 647 aa19.08■□□□□ 0.65
VIM-201ENST00000224237 MDH1BQ5I0G3 518 aa19.08■□□□□ 0.65
VIM-201ENST00000224237 CD300LGQ6UXG3 332 aa19.08■□□□□ 0.65
VIM-201ENST00000224237 POLNQ7Z5Q5 900 aa19.08■□□□□ 0.65
VIM-201ENST00000224237 ADAT2Q7Z6V5 191 aaKnown RBP19.08■□□□□ 0.65
VIM-201ENST00000224237 CCDC26Q8TAB7 109 aa19.08■□□□□ 0.65
VIM-201ENST00000224237 MAIP1Q8WWC4 291 aa19.08■□□□□ 0.65
VIM-201ENST00000224237 RSPH1Q8WYR4 309 aa19.08■□□□□ 0.65
VIM-201ENST00000224237 TBC1D13Q9NVG8 400 aa19.08■□□□□ 0.65
VIM-201ENST00000224237 ATP11BQ9Y2G3 1177 aa19.08■□□□□ 0.65
VIM-201ENST00000224237 PCDHB7Q9Y5E2 793 aa19.08■□□□□ 0.65
VIM-201ENST00000224237 F8W810 466 aa19.07■□□□□ 0.64
VIM-201ENST00000224237 HSPA1AP0DMV8 641 aaKnown RBP19.07■□□□□ 0.64
VIM-201ENST00000224237 HSPA1BP0DMV9 641 aaKnown RBP19.07■□□□□ 0.64
VIM-201ENST00000224237 GJC1P36383 396 aa19.07■□□□□ 0.64
VIM-201ENST00000224237 BRCC3P46736 316 aa19.07■□□□□ 0.64
VIM-201ENST00000224237 ZNF143P52747 638 aaPredicted RBP19.07■□□□□ 0.64
VIM-201ENST00000224237 MRPS25P82663 173 aaKnown RBP19.07■□□□□ 0.64
VIM-201ENST00000224237 KIAA0319Q5VV43 1072 aa19.07■□□□□ 0.64
VIM-201ENST00000224237 MAATS1Q7Z4T9 603 aa19.07■□□□□ 0.64
VIM-201ENST00000224237 CCDC50Q8IVM0 306 aa19.07■□□□□ 0.64
VIM-201ENST00000224237 ABI1Q8IZP0 508 aa19.07■□□□□ 0.64
VIM-201ENST00000224237 HASPINQ8TF76 798 aa19.07■□□□□ 0.64
VIM-201ENST00000224237 RBM41Q96IZ5 413 aaKnown RBP19.07■□□□□ 0.64
VIM-201ENST00000224237 SUSD3Q96L08 255 aa19.07■□□□□ 0.64
VIM-201ENST00000224237 CRTAC1Q9NQ79 661 aa19.07■□□□□ 0.64
VIM-201ENST00000224237 ASNSD1Q9NWL6 643 aa19.07■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms