RNA–Protein interactions for RNA: ENSMUST00000093196.10

Hmgb1-202, Transcript of High mobility group protein B1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Hmgb1, Length 1,092 nt, Biotype protein coding, Subcellular localisation Axon, Exosome .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb1-202ENSMUST00000093196 Nom1Q3UFM5 854 aaKnown RBP12.24□□□□□ -0.45
Hmgb1-202ENSMUST00000093196 Rnf207Q3V3A7 635 aa12.24□□□□□ -0.45
Hmgb1-202ENSMUST00000093196 Ccdc187Q8C5V8 958 aa12.24□□□□□ -0.45
Hmgb1-202ENSMUST00000093196 Sfxn1Q99JR1 322 aa12.24□□□□□ -0.45
Hmgb1-202ENSMUST00000093196 Ifi44lQ9BDB7 447 aa12.24□□□□□ -0.45
Hmgb1-202ENSMUST00000093196 Lztr1Q9CQ33 837 aa12.24□□□□□ -0.45
Hmgb1-202ENSMUST00000093196 Krt17Q9QWL7 433 aa12.24□□□□□ -0.45
Hmgb1-202ENSMUST00000093196 Clip2Q9Z0H8 1047 aa12.24□□□□□ -0.45
Hmgb1-202ENSMUST00000093196 Eif2s3xQ9Z0N1 472 aaKnown RBP12.24□□□□□ -0.45
Hmgb1-202ENSMUST00000093196 Knop1Q9Z2Q2 478 aaKnown RBP12.24□□□□□ -0.45
Hmgb1-202ENSMUST00000093196 Igsf10Q3V1M1 2594 aa12.24□□□□□ -0.45
Hmgb1-202ENSMUST00000093196 Dhtkd1A2ATU0 921 aa12.23□□□□□ -0.45
Hmgb1-202ENSMUST00000093196 F9P16294 471 aa12.23□□□□□ -0.45
Hmgb1-202ENSMUST00000093196 Tgm2P21981 686 aaKnown RBP12.23□□□□□ -0.45
Hmgb1-202ENSMUST00000093196 RdxP26043 583 aaKnown RBP12.23□□□□□ -0.45
Hmgb1-202ENSMUST00000093196 FshrP35378 692 aa12.23□□□□□ -0.45
Hmgb1-202ENSMUST00000093196 Cuzd1P70412 606 aa12.23□□□□□ -0.45
Hmgb1-202ENSMUST00000093196 Gbx1P82976 418 aa12.23□□□□□ -0.45
Hmgb1-202ENSMUST00000093196 Atp8b2P98199 1209 aa12.23□□□□□ -0.45
Hmgb1-202ENSMUST00000093196 CkbQ04447 381 aa12.23□□□□□ -0.45
Hmgb1-202ENSMUST00000093196 Treml4Q3LRV9 263 aa12.23□□□□□ -0.45
Hmgb1-202ENSMUST00000093196 Sh3rf1Q69ZI1 892 aa12.23□□□□□ -0.45
Hmgb1-202ENSMUST00000093196 Tti2Q8BGV4 512 aa12.23□□□□□ -0.45
Hmgb1-202ENSMUST00000093196 CtsoQ8BM88 312 aa12.23□□□□□ -0.45
Hmgb1-202ENSMUST00000093196 Rsl1d1Q8BVY0 452 aaKnown RBP12.23□□□□□ -0.45
Hmgb1-202ENSMUST00000093196 Yars2Q8BYL4 472 aaKnown RBP12.23□□□□□ -0.45
Hmgb1-202ENSMUST00000093196 Zfp566Q8VCI1 386 aa12.23□□□□□ -0.45
Hmgb1-202ENSMUST00000093196 Zfp64Q99KE8 643 aa12.23□□□□□ -0.45
Hmgb1-202ENSMUST00000093196 Dnajb1Q9QYJ3 340 aaKnown RBP12.23□□□□□ -0.45
Hmgb1-202ENSMUST00000093196 PapolbQ9WVP6 641 aa12.23□□□□□ -0.45
Hmgb1-202ENSMUST00000093196 Fam208bQ5DTT3 2382 aa12.23□□□□□ -0.45
Hmgb1-202ENSMUST00000093196 MtorQ9JLN9 2549 aa12.22□□□□□ -0.45
Hmgb1-202ENSMUST00000093196 Ism1A2ATD1 454 aa12.22□□□□□ -0.45
Hmgb1-202ENSMUST00000093196 Smpd5D6MZJ6 483 aa12.22□□□□□ -0.45
Hmgb1-202ENSMUST00000093196 AdssP46664 456 aa12.22□□□□□ -0.45
Hmgb1-202ENSMUST00000093196 Lrrn4P59383 733 aa12.22□□□□□ -0.45
Hmgb1-202ENSMUST00000093196 DtlQ3TLR7 729 aa12.22□□□□□ -0.45
Hmgb1-202ENSMUST00000093196 Mfsd3Q5U419 412 aa12.22□□□□□ -0.45
Hmgb1-202ENSMUST00000093196 Cntn2Q61330 1040 aa12.22□□□□□ -0.45
Hmgb1-202ENSMUST00000093196 Churc1Q6DG52 112 aa12.22□□□□□ -0.45
Hmgb1-202ENSMUST00000093196 Ube2r2Q6ZWZ2 238 aa12.22□□□□□ -0.45
Hmgb1-202ENSMUST00000093196 Samd7Q8C8Y5 445 aa12.22□□□□□ -0.45
Hmgb1-202ENSMUST00000093196 CcinQ8CDE2 588 aa12.22□□□□□ -0.45
Hmgb1-202ENSMUST00000093196 Epn2Q8CHU3 595 aa12.22□□□□□ -0.45
Hmgb1-202ENSMUST00000093196 Depdc1aQ8CIG0 804 aa12.22□□□□□ -0.45
Hmgb1-202ENSMUST00000093196 Cd300ldQ8VCH2 221 aa12.22□□□□□ -0.45
Hmgb1-202ENSMUST00000093196 Dkk4Q8VEJ3 221 aa12.22□□□□□ -0.45
Hmgb1-202ENSMUST00000093196 Znf622Q91VY9 476 aa12.22□□□□□ -0.45
Hmgb1-202ENSMUST00000093196 Q922R1 422 aa12.22□□□□□ -0.45
Hmgb1-202ENSMUST00000093196 Mrpl49Q9CQ40 166 aa12.22□□□□□ -0.45
Hmgb1-202ENSMUST00000093196 Scyl1Q9EQC5 806 aaKnown RBP12.22□□□□□ -0.45
Hmgb1-202ENSMUST00000093196 Bace2Q9JL18 514 aa12.22□□□□□ -0.45
Hmgb1-202ENSMUST00000093196 Tmeff2Q9QYM9 374 aa12.22□□□□□ -0.45
Hmgb1-202ENSMUST00000093196 Kcnh3Q9WVJ0 1095 aa12.22□□□□□ -0.45
Hmgb1-202ENSMUST00000093196 Stk36Q69ZM6 1316 aa12.21□□□□□ -0.45
Hmgb1-202ENSMUST00000093196 C87977A2A958 498 aa12.21□□□□□ -0.45
Hmgb1-202ENSMUST00000093196 Dok2O70469 412 aa12.21□□□□□ -0.45
Hmgb1-202ENSMUST00000093196 Itm2bO89051 266 aa12.21□□□□□ -0.45
Hmgb1-202ENSMUST00000093196 Zhx1P70121 873 aa12.21□□□□□ -0.45
Hmgb1-202ENSMUST00000093196 Q3TTL0 348 aa12.21□□□□□ -0.45
Hmgb1-202ENSMUST00000093196 Rap1gap2Q5SVL6 712 aaKnown RBP12.21□□□□□ -0.45
Hmgb1-202ENSMUST00000093196 Rgl1Q60695 768 aa12.21□□□□□ -0.45
Hmgb1-202ENSMUST00000093196 Cd6Q61003 665 aa12.21□□□□□ -0.45
Hmgb1-202ENSMUST00000093196 Sh3gl3Q62421 347 aa12.21□□□□□ -0.45
Hmgb1-202ENSMUST00000093196 Vcpip1Q8CDG3 1220 aa12.21□□□□□ -0.45
Hmgb1-202ENSMUST00000093196 1700001C19RikQ8K168 210 aa12.21□□□□□ -0.45
Hmgb1-202ENSMUST00000093196 MtapQ9CQ65 283 aa12.21□□□□□ -0.45
Hmgb1-202ENSMUST00000093196 Dnajc18Q9CZJ9 357 aa12.21□□□□□ -0.45
Hmgb1-202ENSMUST00000093196 Cysrt1Q9D1E4 142 aa12.21□□□□□ -0.45
Hmgb1-202ENSMUST00000093196 Dnajb4Q9D832 337 aa12.21□□□□□ -0.45
Hmgb1-202ENSMUST00000093196 MajinQ9D992 256 aa12.21□□□□□ -0.45
Hmgb1-202ENSMUST00000093196 TsaccQ9DA44 124 aa12.21□□□□□ -0.45
Hmgb1-202ENSMUST00000093196 Q9DAZ5 108 aa12.21□□□□□ -0.45
Hmgb1-202ENSMUST00000093196 Mmp1aQ9EPL5 464 aa12.21□□□□□ -0.45
Hmgb1-202ENSMUST00000093196 Elf2Q9JHC9 593 aa12.21□□□□□ -0.45
Hmgb1-202ENSMUST00000093196 Noc2lQ9WV70 747 aaKnown RBP12.21□□□□□ -0.45
Hmgb1-202ENSMUST00000093196 Dock5B2RY04 1868 aa12.21□□□□□ -0.46
Hmgb1-202ENSMUST00000093196 Erdr1J3QMM0 206 aa12.2□□□□□ -0.46
Hmgb1-202ENSMUST00000093196 Gm21887J3QQ04 176 aa12.2□□□□□ -0.46
Hmgb1-202ENSMUST00000093196 Gpr27O54897 379 aa12.2□□□□□ -0.46
Hmgb1-202ENSMUST00000093196 CkmP07310 381 aa12.2□□□□□ -0.46
Hmgb1-202ENSMUST00000093196 Hoxd13P70217 339 aa12.2□□□□□ -0.46
Hmgb1-202ENSMUST00000093196 4930502E18RikQ14BQ3 236 aa12.2□□□□□ -0.46
Hmgb1-202ENSMUST00000093196 Lrrn4clQ3TYX2 239 aa12.2□□□□□ -0.46
Hmgb1-202ENSMUST00000093196 Brd9Q3UQU0 596 aaKnown RBP12.2□□□□□ -0.46
Hmgb1-202ENSMUST00000093196 Fam149b1Q6NSV7 578 aa12.2□□□□□ -0.46
Hmgb1-202ENSMUST00000093196 Slc34a3Q80SU6 601 aa12.2□□□□□ -0.46
Hmgb1-202ENSMUST00000093196 Vps37dQ810I0 261 aa12.2□□□□□ -0.46
Hmgb1-202ENSMUST00000093196 Eif2b5Q8CHW4 717 aa12.2□□□□□ -0.46
Hmgb1-202ENSMUST00000093196 Brms1Q99N20 246 aa12.2□□□□□ -0.46
Hmgb1-202ENSMUST00000093196 Nudt5Q9JKX6 218 aa12.2□□□□□ -0.46
Hmgb1-202ENSMUST00000093196 Lrit3W8DXL4 681 aa12.2□□□□□ -0.46
Hmgb1-202ENSMUST00000093196 RlfA2A7F4 1918 aa12.19□□□□□ -0.46
Hmgb1-202ENSMUST00000093196 Arhgef10Q8C033 1345 aa12.19□□□□□ -0.46
Hmgb1-202ENSMUST00000093196 Ajap1A2ALI5 412 aa12.19□□□□□ -0.46
Hmgb1-202ENSMUST00000093196 Itga8A2ARA8 1062 aa12.19□□□□□ -0.46
Hmgb1-202ENSMUST00000093196 Gm10718D3Z1I7 227 aa12.19□□□□□ -0.46
Hmgb1-202ENSMUST00000093196 Folh1O35409 752 aa12.19□□□□□ -0.46
Hmgb1-202ENSMUST00000093196 Nmt2O70311 529 aa12.19□□□□□ -0.46
Hmgb1-202ENSMUST00000093196 SfnO70456 248 aaKnown RBP12.19□□□□□ -0.46
Retrieved 100 of 22,080 RNA–protein pairs in 53.1 ms