RNA–Protein interactions for RNA: YNL049C

SFB2, Transcript of Component of the Sec23p-Sfb2p heterodimer of the COPII vesicle coat, yeastyeast

Gene SFB2, Length 2,631 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SFB2YNL049C YJL027CP47063 138 aaPredicted RBP1.12□□□□□ -2.23
SFB2YNL049C YAE1P47118 141 aaPredicted RBP1.12□□□□□ -2.23
SFB2YNL049C GIM3P53900 129 aa1.12□□□□□ -2.23
SFB2YNL049C HTB2P02294 131 aa1.12□□□□□ -2.23
SFB2YNL049C SNF4P12904 322 aa1.12□□□□□ -2.23
SFB2YNL049C RNP1P32385 249 aa1.12□□□□□ -2.23
SFB2YNL049C EMP24P32803 203 aaKnown RBP1.12□□□□□ -2.23
SFB2YNL049C NRG2P38082 220 aa1.12□□□□□ -2.23
SFB2YNL049C YOR385WQ08909 290 aa1.12□□□□□ -2.23
SFB2YNL049C VAR1P02381 398 aa1.11□□□□□ -2.23
SFB2YNL049C ANB1P19211 157 aa1.11□□□□□ -2.23
SFB2YNL049C PAU24P38155 120 aa1.11□□□□□ -2.23
SFB2YNL049C YER137CP40083 148 aaKnown RBP1.11□□□□□ -2.23
SFB2YNL049C SNZ1Q03148 297 aa1.11□□□□□ -2.23
SFB2YNL049C YMR226CQ05016 267 aaKnown RBP1.11□□□□□ -2.23
SFB2YNL049C YPR195CQ06594 109 aa1.11□□□□□ -2.23
SFB2YNL049C YOR268CQ08734 132 aa1.11□□□□□ -2.23
SFB2YNL049C MRP49P32388 137 aa1.11□□□□□ -2.23
SFB2YNL049C ERG24P32462 438 aaKnown RBP1.11□□□□□ -2.23
SFB2YNL049C FMT1P32785 401 aa1.11□□□□□ -2.23
SFB2YNL049C CSH1P38287 376 aa1.11□□□□□ -2.23
SFB2YNL049C HPM1P40481 377 aa1.11□□□□□ -2.23
SFB2YNL049C EMC5P40540 141 aa1.11□□□□□ -2.23
SFB2YNL049C YDR366CP87287 132 aa1.11□□□□□ -2.23
SFB2YNL049C RPL33AP05744 107 aaKnown RBP1.1□□□□□ -2.23
SFB2YNL049C RPL33BP41056 107 aaKnown RBP1.1□□□□□ -2.23
SFB2YNL049C IMP2P46972 177 aa1.1□□□□□ -2.23
SFB2YNL049C GPI14P47088 403 aaKnown RBP1.1□□□□□ -2.23
SFB2YNL049C BXI1P48558 297 aa1.1□□□□□ -2.23
SFB2YNL049C BRP1P53194 125 aa1.1□□□□□ -2.23
SFB2YNL049C THI74Q04083 370 aa1.1□□□□□ -2.23
SFB2YNL049C YDR114CQ04597 100 aa1.1□□□□□ -2.23
SFB2YNL049C LCL2Q08045 131 aa1.1□□□□□ -2.23
SFB2YNL049C YPR013CQ12145 317 aa1.1□□□□□ -2.23
SFB2YNL049C FCY1Q12178 158 aa1.1□□□□□ -2.23
SFB2YNL049C CMC4Q3E7A9 73 aa1.1□□□□□ -2.23
SFB2YNL049C DDI2P0CH63 225 aa1.1□□□□□ -2.23
SFB2YNL049C DDI3P0CH64 225 aa1.1□□□□□ -2.23
SFB2YNL049C KRE1P17260 313 aa1.1□□□□□ -2.23
SFB2YNL049C BUD23P25627 275 aaPredicted RBP1.1□□□□□ -2.23
SFB2YNL049C NVJ1P38881 321 aa1.1□□□□□ -2.23
SFB2YNL049C PDR17P53844 350 aa1.1□□□□□ -2.23
SFB2YNL049C RPB3P16370 318 aaKnown RBP1.09□□□□□ -2.23
SFB2YNL049C SHE2P36068 246 aaKnown RBP RIP-Chip data1.09□□□□□ -2.23not detected
SFB2YNL049C TRM5P38793 499 aa1.09□□□□□ -2.23
SFB2YNL049C TIR3P40552 269 aa1.09□□□□□ -2.23
SFB2YNL049C TMA22P47089 198 aaPredicted RBP1.09□□□□□ -2.23
SFB2YNL049C FRQ1Q06389 190 aa1.09□□□□□ -2.23
SFB2YNL049C YLL066W-BQ8TGJ7 56 aa1.09□□□□□ -2.23
SFB2YNL049C MED11Q99278 115 aa1.09□□□□□ -2.23
SFB2YNL049C HTL1Q9URQ5 78 aa1.09□□□□□ -2.23
SFB2YNL049C RPL27AP0C2H6 136 aaKnown RBP1.09□□□□□ -2.24
SFB2YNL049C RPL27BP0C2H7 136 aaKnown RBP1.09□□□□□ -2.24
SFB2YNL049C MRP17P28778 131 aa1.09□□□□□ -2.24
SFB2YNL049C COS8P38723 381 aa1.09□□□□□ -2.24
SFB2YNL049C RPF1P38805 295 aaKnown RBP1.09□□□□□ -2.24
SFB2YNL049C SMD3P43321 101 aaKnown RBP1.09□□□□□ -2.24
SFB2YNL049C OST2P46964 130 aa1.09□□□□□ -2.24
SFB2YNL049C ILM1P47155 203 aa1.09□□□□□ -2.24
SFB2YNL049C EST3Q03096 181 aa1.09□□□□□ -2.24
SFB2YNL049C YMR253CQ04835 414 aa1.09□□□□□ -2.24
SFB2YNL049C SYM1Q06563 197 aa1.09□□□□□ -2.24
SFB2YNL049C SCP1Q08873 200 aa1.09□□□□□ -2.24
SFB2YNL049C YPL257WQ08974 193 aa1.09□□□□□ -2.24
SFB2YNL049C PRM7Q12459 698 aa1.09□□□□□ -2.24
SFB2YNL049C GCN3P14741 305 aa1.08□□□□□ -2.24
SFB2YNL049C NOP1P15646 327 aaKnown RBP1.08□□□□□ -2.24
SFB2YNL049C APS1P35181 156 aa1.08□□□□□ -2.24
SFB2YNL049C YAR029WP39549 74 aa1.08□□□□□ -2.24
SFB2YNL049C VMA10P48836 114 aaKnown RBP1.08□□□□□ -2.24
SFB2YNL049C YLR194CQ05777 254 aa1.08□□□□□ -2.24
SFB2YNL049C YLR307C-AQ3E825 87 aa1.08□□□□□ -2.24
SFB2YNL049C YHR032W-AP0C5N6 59 aa1.08□□□□□ -2.24
SFB2YNL049C YHR213WP0CI67 198 aa1.08□□□□□ -2.24
SFB2YNL049C FCY2P17064 533 aa1.08□□□□□ -2.24
SFB2YNL049C YHR125WP38831 101 aa1.08□□□□□ -2.24
SFB2YNL049C YOR020W-AQ3E824 90 aa1.08□□□□□ -2.24
SFB2YNL049C YOS1Q3E834 85 aa1.08□□□□□ -2.24
SFB2YNL049C Q0255P03881 472 aa1.07□□□□□ -2.24
SFB2YNL049C QCR2P07257 368 aa1.07□□□□□ -2.24
SFB2YNL049C SEC4P07560 215 aaKnown RBP1.07□□□□□ -2.24
SFB2YNL049C YPT31P38555 223 aaKnown RBP1.07□□□□□ -2.24
SFB2YNL049C YHR022CP38763 256 aa1.07□□□□□ -2.24
SFB2YNL049C YGL088WP53151 121 aa1.07□□□□□ -2.24
SFB2YNL049C PET20Q99373 253 aa1.07□□□□□ -2.24
SFB2YNL049C YKR032WP36127 104 aa1.07□□□□□ -2.24
SFB2YNL049C NSA2P40078 261 aaKnown RBP1.07□□□□□ -2.24
SFB2YNL049C ARC15P40518 154 aaRIP-Chip data1.07□□□□□ -2.24not detected
SFB2YNL049C YJR146WP47174 117 aa1.07□□□□□ -2.24
SFB2YNL049C MMS2P53152 137 aa1.07□□□□□ -2.24
SFB2YNL049C DIA1P54005 336 aa1.07□□□□□ -2.24
SFB2YNL049C UBC7Q02159 165 aa1.07□□□□□ -2.24
SFB2YNL049C ABF2Q02486 183 aa1.07□□□□□ -2.24
SFB2YNL049C LSO2Q3E772 92 aaKnown RBP1.07□□□□□ -2.24
SFB2YNL049C YPR170W-BP0C5R9 85 aa1.06□□□□□ -2.24
SFB2YNL049C SEN2P16658 377 aa1.06□□□□□ -2.24
SFB2YNL049C PAN3P36102 679 aaPredicted RBP1.06□□□□□ -2.24
SFB2YNL049C SHB17P36136 271 aaKnown RBP1.06□□□□□ -2.24
SFB2YNL049C MRPL28P36527 147 aa1.06□□□□□ -2.24
SFB2YNL049C ERV15P38312 142 aa1.06□□□□□ -2.24
Retrieved 100 of 5,963 RNA–protein pairs in 61.4 ms