RNA–Protein interactions for RNA: ENST00000639568.1

PTP4A1-207, Transcript of protein tyrosine phosphatase type IVA, member 1, humanhuman

TSL 5

Gene PTP4A1, Length 532 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1-207ENST00000639568 PLK4O00444 970 aa11.93□□□□□ -0.5
PTP4A1-207ENST00000639568 NDUFS2O75306 463 aa11.93□□□□□ -0.5
PTP4A1-207ENST00000639568 ZNF217O75362 1048 aa11.93□□□□□ -0.5
PTP4A1-207ENST00000639568 F11P03951 625 aa11.93□□□□□ -0.5
PTP4A1-207ENST00000639568 CKMP06732 381 aa11.93□□□□□ -0.5
PTP4A1-207ENST00000639568 USP17L7P0C7H9 530 aa11.93□□□□□ -0.5
PTP4A1-207ENST00000639568 OPRD1P41143 372 aa11.93□□□□□ -0.5
PTP4A1-207ENST00000639568 CDR1P51861 262 aa11.93□□□□□ -0.5
PTP4A1-207ENST00000639568 CXADRP78310 365 aa11.93□□□□□ -0.5
PTP4A1-207ENST00000639568 SSRP1Q08945 709 aaKnown RBP11.93□□□□□ -0.5
PTP4A1-207ENST00000639568 KRT32Q14532 448 aa11.93□□□□□ -0.5
PTP4A1-207ENST00000639568 NTRK3Q16288 839 aa11.93□□□□□ -0.5
PTP4A1-207ENST00000639568 PREPLQ4J6C6 727 aaPredicted RBP11.93□□□□□ -0.5
PTP4A1-207ENST00000639568 WDR45BQ5MNZ6 344 aa11.93□□□□□ -0.5
PTP4A1-207ENST00000639568 TMEM150AQ86TG1 271 aa11.93□□□□□ -0.5
PTP4A1-207ENST00000639568 BRF1Q92994 677 aa11.93□□□□□ -0.5
PTP4A1-207ENST00000639568 TOR4AQ9NXH8 423 aa11.93□□□□□ -0.5
PTP4A1-207ENST00000639568 TUBGCP4Q9UGJ1 667 aa11.93□□□□□ -0.5
PTP4A1-207ENST00000639568 MAGED2Q9UNF1 606 aaPredicted RBP11.93□□□□□ -0.5
PTP4A1-207ENST00000639568 AK5Q9Y6K8 562 aa11.93□□□□□ -0.5
PTP4A1-207ENST00000639568 COL12A1Q99715 3063 aa11.92□□□□□ -0.5
PTP4A1-207ENST00000639568 TRAV19A0A0A6YYK7 116 aa11.92□□□□□ -0.5
PTP4A1-207ENST00000639568 FLRT2O43155 660 aa11.92□□□□□ -0.5
PTP4A1-207ENST00000639568 DKK1O94907 266 aa11.92□□□□□ -0.5
PTP4A1-207ENST00000639568 CER1O95813 267 aa11.92□□□□□ -0.5
PTP4A1-207ENST00000639568 APODP05090 189 aa11.92□□□□□ -0.5
PTP4A1-207ENST00000639568 MCF2P10911 925 aa11.92□□□□□ -0.5
PTP4A1-207ENST00000639568 ODC1P11926 461 aa11.92□□□□□ -0.5
PTP4A1-207ENST00000639568 HARSP12081 509 aaKnown RBP11.92□□□□□ -0.5
PTP4A1-207ENST00000639568 TYMPP19971 482 aa11.92□□□□□ -0.5
PTP4A1-207ENST00000639568 SCRN1Q12765 414 aa11.92□□□□□ -0.5
PTP4A1-207ENST00000639568 SUZ12Q15022 739 aaKnown RBP11.92□□□□□ -0.5
PTP4A1-207ENST00000639568 SMAD1Q15797 465 aaKnown RBP11.92□□□□□ -0.5
PTP4A1-207ENST00000639568 ZNF77Q15935 545 aa11.92□□□□□ -0.5
PTP4A1-207ENST00000639568 ADCK5Q3MIX3 580 aa11.92□□□□□ -0.5
PTP4A1-207ENST00000639568 C6orf118Q5T5N4 469 aa11.92□□□□□ -0.5
PTP4A1-207ENST00000639568 Q6ZUG5 572 aa11.92□□□□□ -0.5
PTP4A1-207ENST00000639568 SLC41A1Q8IVJ1 513 aa11.92□□□□□ -0.5
PTP4A1-207ENST00000639568 ENGASEQ8NFI3 743 aa11.92□□□□□ -0.5
PTP4A1-207ENST00000639568 SPATA18Q8TC71 538 aa11.92□□□□□ -0.5
PTP4A1-207ENST00000639568 FOXJ1Q92949 421 aa11.92□□□□□ -0.5
PTP4A1-207ENST00000639568 PNKPQ96T60 521 aa11.92□□□□□ -0.5
PTP4A1-207ENST00000639568 MRPL4Q9BYD3 311 aaKnown RBP11.92□□□□□ -0.5
PTP4A1-207ENST00000639568 LINC00597Q9H2U6 94 aa11.92□□□□□ -0.5
PTP4A1-207ENST00000639568 GAREM1Q9H706 876 aa11.92□□□□□ -0.5
PTP4A1-207ENST00000639568 TMEM206Q9H813 350 aa11.92□□□□□ -0.5
PTP4A1-207ENST00000639568 TM7SF3Q9NS93 570 aa11.92□□□□□ -0.5
PTP4A1-207ENST00000639568 CALCOCO1Q9P1Z2 691 aa11.92□□□□□ -0.5
PTP4A1-207ENST00000639568 DNMT3LQ9UJW3 386 aa11.92□□□□□ -0.5
PTP4A1-207ENST00000639568 GON4LQ3T8J9 2241 aa11.92□□□□□ -0.5
PTP4A1-207ENST00000639568 ATMQ13315 3056 aa11.92□□□□□ -0.5
PTP4A1-207ENST00000639568 PLXNB3Q9ULL4 1909 aa11.92□□□□□ -0.5
PTP4A1-207ENST00000639568 NUP210Q8TEM1 1887 aaPredicted RBP11.91□□□□□ -0.5
PTP4A1-207ENST00000639568 KIF26AQ9ULI4 1882 aaPredicted RBP11.91□□□□□ -0.5
PTP4A1-207ENST00000639568 SHROOM3Q8TF72 1996 aa11.91□□□□□ -0.5
PTP4A1-207ENST00000639568 ARHGEF35A5YM69 484 aa11.91□□□□□ -0.5
PTP4A1-207ENST00000639568 SLC28A2O43868 658 aa11.91□□□□□ -0.5
PTP4A1-207ENST00000639568 KAT7O95251 611 aa11.91□□□□□ -0.5
PTP4A1-207ENST00000639568 ZNF883P0CG24 379 aa11.91□□□□□ -0.5
PTP4A1-207ENST00000639568 MATKP42679 507 aa11.91□□□□□ -0.5
PTP4A1-207ENST00000639568 IL12RB1P42701 662 aa11.91□□□□□ -0.5
PTP4A1-207ENST00000639568 CSRP3P50461 194 aa11.91□□□□□ -0.5
PTP4A1-207ENST00000639568 SMARCB1Q12824 385 aa11.91□□□□□ -0.5
PTP4A1-207ENST00000639568 EMC10Q5UCC4 262 aa11.91□□□□□ -0.5
PTP4A1-207ENST00000639568 PADI6Q6TGC4 694 aa11.91□□□□□ -0.5
PTP4A1-207ENST00000639568 PCSK4Q6UW60 755 aa11.91□□□□□ -0.5
PTP4A1-207ENST00000639568 IL27RAQ6UWB1 636 aa11.91□□□□□ -0.5
PTP4A1-207ENST00000639568 TRMT11Q7Z4G4 463 aaKnown RBP11.91□□□□□ -0.5
PTP4A1-207ENST00000639568 FAM177A1Q8N128 213 aaPredicted RBP11.91□□□□□ -0.5
PTP4A1-207ENST00000639568 SH3RF2Q8TEC5 729 aa11.91□□□□□ -0.5
PTP4A1-207ENST00000639568 C2orf15Q8WU43 125 aaKnown RBP11.91□□□□□ -0.5
PTP4A1-207ENST00000639568 YTHDC1Q96MU7 727 aaKnown RBP11.91□□□□□ -0.5
PTP4A1-207ENST00000639568 CYP2S1Q96SQ9 504 aa11.91□□□□□ -0.5
PTP4A1-207ENST00000639568 ACO2Q99798 780 aaKnown RBP11.91□□□□□ -0.5
PTP4A1-207ENST00000639568 ESYT1Q9BSJ8 1104 aa11.91□□□□□ -0.5
PTP4A1-207ENST00000639568 GTF3C5Q9Y5Q8 519 aaPredicted RBP11.91□□□□□ -0.5
PTP4A1-207ENST00000639568 IGHV1OR15-9A0A0B4J2B8 117 aa11.9□□□□□ -0.5
PTP4A1-207ENST00000639568 A0A1B0GTW7 788 aa11.9□□□□□ -0.5
PTP4A1-207ENST00000639568 TNFSF14O43557 240 aa11.9□□□□□ -0.5
PTP4A1-207ENST00000639568 ADAM23O75077 832 aa11.9□□□□□ -0.5
PTP4A1-207ENST00000639568 CILPO75339 1184 aa11.9□□□□□ -0.5
PTP4A1-207ENST00000639568 DEXIO95424 95 aa11.9□□□□□ -0.5
PTP4A1-207ENST00000639568 CSH1P0DML2 217 aa11.9□□□□□ -0.5
PTP4A1-207ENST00000639568 CSH2P0DML3 217 aa11.9□□□□□ -0.5
PTP4A1-207ENST00000639568 C6P13671 934 aa11.9□□□□□ -0.5
PTP4A1-207ENST00000639568 JUPP14923 745 aa11.9□□□□□ -0.5
PTP4A1-207ENST00000639568 HMGA1P17096 107 aaKnown RBP11.9□□□□□ -0.5
PTP4A1-207ENST00000639568 CYP11B2P19099 503 aa11.9□□□□□ -0.5
PTP4A1-207ENST00000639568 MAOBP27338 520 aa11.9□□□□□ -0.5
PTP4A1-207ENST00000639568 HNF1BP35680 557 aa11.9□□□□□ -0.5
PTP4A1-207ENST00000639568 TNFRSF4P43489 277 aa11.9□□□□□ -0.5
PTP4A1-207ENST00000639568 AARSP49588 968 aaKnown RBP eCLIP11.9□□□□□ -0.5
PTP4A1-207ENST00000639568 CCT2P78371 535 aaKnown RBP11.9□□□□□ -0.5
PTP4A1-207ENST00000639568 RHDQ02161 417 aa11.9□□□□□ -0.5
PTP4A1-207ENST00000639568 USP4Q13107 963 aa11.9□□□□□ -0.5
PTP4A1-207ENST00000639568 PIK3AP1Q6ZUJ8 805 aa11.9□□□□□ -0.5
PTP4A1-207ENST00000639568 TMPRSS12Q86WS5 348 aa11.9□□□□□ -0.5
PTP4A1-207ENST00000639568 BAHD1Q8TBE0 780 aaPredicted RBP11.9□□□□□ -0.5
PTP4A1-207ENST00000639568 SPPL2BQ8TCT7 592 aa11.9□□□□□ -0.5
PTP4A1-207ENST00000639568 WBP1Q96G27 269 aa11.9□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms