RNA–Protein interactions for RNA: ENST00000639498.1

KCNMA1-263, Transcript of potassium calcium-activated channel subfamily M alpha 1, humanhuman

APPRIS ALT2 TSL 5

Gene KCNMA1, Length 4,711 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCNMA1-263ENST00000639498 ATG4AQ8WYN0 398 aa12.5□□□□□ -0.41
KCNMA1-263ENST00000639498 SEC16BQ96JE7 1060 aa12.5□□□□□ -0.41
KCNMA1-263ENST00000639498 NAT9Q9BTE0 207 aa12.5□□□□□ -0.41
KCNMA1-263ENST00000639498 TLR10Q9BXR5 811 aa12.5□□□□□ -0.41
KCNMA1-263ENST00000639498 DDX3XO00571 662 aaKnown RBP eCLIP12.5□□□□□ -0.41
KCNMA1-263ENST00000639498 NEMP1O14524 444 aa12.5□□□□□ -0.41
KCNMA1-263ENST00000639498 AP1G2O75843 785 aa12.5□□□□□ -0.41
KCNMA1-263ENST00000639498 IL1RL1Q01638 556 aa12.5□□□□□ -0.41
KCNMA1-263ENST00000639498 SMAD1Q15797 465 aaKnown RBP12.5□□□□□ -0.41
KCNMA1-263ENST00000639498 IMPG1Q17R60 797 aa12.5□□□□□ -0.41
KCNMA1-263ENST00000639498 LY6KQ17RY6 165 aa12.5□□□□□ -0.41
KCNMA1-263ENST00000639498 LRRC55Q6ZSA7 311 aa12.5□□□□□ -0.41
KCNMA1-263ENST00000639498 TAS2R42Q7RTR8 314 aa12.5□□□□□ -0.41
KCNMA1-263ENST00000639498 CDC26Q8NHZ8 85 aa12.5□□□□□ -0.41
KCNMA1-263ENST00000639498 USP33Q8TEY7 942 aa12.5□□□□□ -0.41
KCNMA1-263ENST00000639498 STAMBPL1Q96FJ0 436 aa12.5□□□□□ -0.41
KCNMA1-263ENST00000639498 EGFL8Q99944 293 aa12.5□□□□□ -0.41
KCNMA1-263ENST00000639498 ASCC2Q9H1I8 757 aaPredicted RBP12.5□□□□□ -0.41
KCNMA1-263ENST00000639498 AVENQ9NQS1 362 aaPredicted RBP12.5□□□□□ -0.41
KCNMA1-263ENST00000639498 RAB21Q9UL25 225 aa12.5□□□□□ -0.41
KCNMA1-263ENST00000639498 ZC3H4Q9UPT8 1303 aaKnown RBP12.49□□□□□ -0.41
KCNMA1-263ENST00000639498 HOXC6P09630 235 aa12.49□□□□□ -0.41
KCNMA1-263ENST00000639498 CXCL8P10145 99 aa12.49□□□□□ -0.41
KCNMA1-263ENST00000639498 AP2B1P63010 937 aa12.49□□□□□ -0.41
KCNMA1-263ENST00000639498 PTGISQ16647 500 aa12.49□□□□□ -0.41
KCNMA1-263ENST00000639498 TATDN1Q6P1N9 297 aa12.49□□□□□ -0.41
KCNMA1-263ENST00000639498 LINC00523Q86TU6 105 aa12.49□□□□□ -0.41
KCNMA1-263ENST00000639498 NT5DC4Q86YG4 428 aa12.49□□□□□ -0.41
KCNMA1-263ENST00000639498 C3orf20Q8ND61 904 aa12.49□□□□□ -0.41
KCNMA1-263ENST00000639498 CCDC124Q96CT7 223 aaKnown RBP12.49□□□□□ -0.41
KCNMA1-263ENST00000639498 ADAM33Q9BZ11 813 aa12.49□□□□□ -0.41
KCNMA1-263ENST00000639498 ABHD16BQ9H3Z7 469 aa12.49□□□□□ -0.41
KCNMA1-263ENST00000639498 SUDS3Q9H7L9 328 aaPredicted RBP12.49□□□□□ -0.41
KCNMA1-263ENST00000639498 ARHGEF38Q9NXL2 777 aa12.49□□□□□ -0.41
KCNMA1-263ENST00000639498 MED1Q15648 1581 aaPredicted RBP12.49□□□□□ -0.41
KCNMA1-263ENST00000639498 FBXO21O94952 628 aa12.49□□□□□ -0.41
KCNMA1-263ENST00000639498 ACO1P21399 889 aaKnown RBP12.49□□□□□ -0.41
KCNMA1-263ENST00000639498 COL9A3Q14050 684 aaPredicted RBP12.49□□□□□ -0.41
KCNMA1-263ENST00000639498 ACCSLQ4AC99 568 aa12.49□□□□□ -0.41
KCNMA1-263ENST00000639498 TTC23LQ6PF05 361 aa12.49□□□□□ -0.41
KCNMA1-263ENST00000639498 GANCQ8TET4 914 aa12.49□□□□□ -0.41
KCNMA1-263ENST00000639498 WDR18Q9BV38 432 aa12.49□□□□□ -0.41
KCNMA1-263ENST00000639498 UBIAD1Q9Y5Z9 338 aa12.49□□□□□ -0.41
KCNMA1-263ENST00000639498 CACNA1FO60840 1977 aa12.49□□□□□ -0.41
KCNMA1-263ENST00000639498 THPOP40225 353 aa12.49□□□□□ -0.41
KCNMA1-263ENST00000639498 MGAT5BQ3V5L5 792 aa12.49□□□□□ -0.41
KCNMA1-263ENST00000639498 SPOCD1Q6ZMY3 1216 aa12.49□□□□□ -0.41
KCNMA1-263ENST00000639498 PTF1AQ7RTS3 328 aa12.49□□□□□ -0.41
KCNMA1-263ENST00000639498 PARP9Q8IXQ6 854 aa12.49□□□□□ -0.41
KCNMA1-263ENST00000639498 SPATA20Q8TB22 786 aa12.49□□□□□ -0.41
KCNMA1-263ENST00000639498 PCMTD2Q9NV79 361 aa12.49□□□□□ -0.41
KCNMA1-263ENST00000639498 DISP2A7MBM2 1401 aa12.49□□□□□ -0.41
KCNMA1-263ENST00000639498 CYB561D2O14569 222 aa12.49□□□□□ -0.41
KCNMA1-263ENST00000639498 PLA2G6O60733 806 aa12.49□□□□□ -0.41
KCNMA1-263ENST00000639498 ANXA9O76027 345 aa12.49□□□□□ -0.41
KCNMA1-263ENST00000639498 OTUD4Q01804 1114 aaKnown RBP12.49□□□□□ -0.41
KCNMA1-263ENST00000639498 SLC9A9Q8IVB4 645 aa12.49□□□□□ -0.41
KCNMA1-263ENST00000639498 ACSF2Q96CM8 615 aaPredicted RBP12.49□□□□□ -0.41
KCNMA1-263ENST00000639498 CCDC138Q96M89 665 aa12.49□□□□□ -0.41
KCNMA1-263ENST00000639498 SEPT5Q99719 369 aaPredicted RBP12.49□□□□□ -0.41
KCNMA1-263ENST00000639498 WDCPQ9H6R7 721 aa12.49□□□□□ -0.41
KCNMA1-263ENST00000639498 ANKZF1Q9H8Y5 726 aa12.49□□□□□ -0.41
KCNMA1-263ENST00000639498 BARX2Q9UMQ3 279 aaPredicted RBP12.49□□□□□ -0.41
KCNMA1-263ENST00000639498 LRRIQ3A6PVS8 624 aaPredicted RBP12.48□□□□□ -0.41
KCNMA1-263ENST00000639498 GFAPP14136 432 aa12.48□□□□□ -0.41
KCNMA1-263ENST00000639498 FBXO47Q5MNV8 452 aa12.48□□□□□ -0.41
KCNMA1-263ENST00000639498 TRPM8Q7Z2W7 1104 aa12.48□□□□□ -0.41
KCNMA1-263ENST00000639498 ARHGEF19Q8IW93 802 aa12.48□□□□□ -0.41
KCNMA1-263ENST00000639498 ADGRF2Q8IZF7 708 aa12.48□□□□□ -0.41
KCNMA1-263ENST00000639498 AGGF1Q8N302 714 aaeCLIP12.48□□□□□ -0.416e-8■■■■■ 28.7
KCNMA1-263ENST00000639498 FAM172AQ8WUF8 416 aa12.48□□□□□ -0.41
KCNMA1-263ENST00000639498 TNFRSF25Q93038 417 aa12.48□□□□□ -0.41
KCNMA1-263ENST00000639498 PIDD1Q9HB75 910 aa12.48□□□□□ -0.41
KCNMA1-263ENST00000639498 C20orf96Q9NUD7 363 aaPredicted RBP12.48□□□□□ -0.41
KCNMA1-263ENST00000639498 ABCF3Q9NUQ8 709 aa12.48□□□□□ -0.41
KCNMA1-263ENST00000639498 USP18Q9UMW8 372 aa12.48□□□□□ -0.41
KCNMA1-263ENST00000639498 ROBO3Q96MS0 1386 aa12.48□□□□□ -0.41
KCNMA1-263ENST00000639498 ZBTB39O15060 712 aa12.48□□□□□ -0.41
KCNMA1-263ENST00000639498 THP07101 528 aa12.48□□□□□ -0.41
KCNMA1-263ENST00000639498 LHX1P48742 406 aa12.48□□□□□ -0.41
KCNMA1-263ENST00000639498 CNTN2Q02246 1040 aa12.48□□□□□ -0.41
KCNMA1-263ENST00000639498 KCNT1Q5JUK3 1230 aa12.48□□□□□ -0.41
KCNMA1-263ENST00000639498 CATSPERGQ6ZRH7 1159 aa12.48□□□□□ -0.41
KCNMA1-263ENST00000639498 KDELC2Q7Z4H8 507 aa12.48□□□□□ -0.41
KCNMA1-263ENST00000639498 PCSK9Q8NBP7 692 aaKnown RBP12.48□□□□□ -0.41
KCNMA1-263ENST00000639498 ZNF669Q96BR6 464 aaPredicted RBP12.48□□□□□ -0.41
KCNMA1-263ENST00000639498 NDFIP2Q9NV92 336 aa12.48□□□□□ -0.41
KCNMA1-263ENST00000639498 WDR70Q9NW82 654 aa12.48□□□□□ -0.41
KCNMA1-263ENST00000639498 TRPA1O75762 1119 aa12.48□□□□□ -0.41
KCNMA1-263ENST00000639498 KRT4P19013 534 aa12.48□□□□□ -0.41
KCNMA1-263ENST00000639498 SEC24CP53992 1094 aa12.48□□□□□ -0.41
KCNMA1-263ENST00000639498 GTF2BQ00403 316 aa12.48□□□□□ -0.41
KCNMA1-263ENST00000639498 ZNF268Q14587 947 aaPredicted RBP12.48□□□□□ -0.41
KCNMA1-263ENST00000639498 IL17AQ16552 155 aa12.48□□□□□ -0.41
KCNMA1-263ENST00000639498 LVRNQ6Q4G3 990 aa12.48□□□□□ -0.41
KCNMA1-263ENST00000639498 CHSY1Q86X52 802 aa12.48□□□□□ -0.41
KCNMA1-263ENST00000639498 RIOX2Q8IUF8 465 aa12.48□□□□□ -0.41
KCNMA1-263ENST00000639498 MTIF3Q9H2K0 278 aaKnown RBP12.48□□□□□ -0.41
KCNMA1-263ENST00000639498 TMEM134Q9H6X4 195 aa12.48□□□□□ -0.41
KCNMA1-263ENST00000639498 NPHS2Q9NP85 383 aa12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms