RNA–Protein interactions for RNA: ENST00000639487.1

RTTN-215, Transcript of rotatin, humanhuman

TSL 5

Gene RTTN, Length 3,175 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTTN-215ENST00000639487 XKR9Q5GH70 373 aa6.94□□□□□ -1.3
RTTN-215ENST00000639487 GLB1LQ6UWU2 654 aa6.94□□□□□ -1.3
RTTN-215ENST00000639487 C4orf50Q6ZRC1 276 aa6.94□□□□□ -1.3
RTTN-215ENST00000639487 SFR1Q86XK3 245 aa6.94□□□□□ -1.3
RTTN-215ENST00000639487 FAM178BQ8IXR5 827 aa6.94□□□□□ -1.3
RTTN-215ENST00000639487 PLEKHO2Q8TD55 490 aa6.94□□□□□ -1.3
RTTN-215ENST00000639487 SLC35F5Q8WV83 523 aa6.94□□□□□ -1.3
RTTN-215ENST00000639487 SMARCE1Q969G3 411 aa6.94□□□□□ -1.3
RTTN-215ENST00000639487 TTC17Q96AE7 1141 aa6.94□□□□□ -1.3
RTTN-215ENST00000639487 ZC3H10Q96K80 434 aaKnown RBP6.94□□□□□ -1.3
RTTN-215ENST00000639487 HAPLN3Q96S86 360 aa6.94□□□□□ -1.3
RTTN-215ENST00000639487 BHMT2Q9H2M3 363 aa6.94□□□□□ -1.3
RTTN-215ENST00000639487 TRMT13Q9NUP7 481 aaKnown RBP6.94□□□□□ -1.3
RTTN-215ENST00000639487 SETD4Q9NVD3 440 aa6.94□□□□□ -1.3
RTTN-215ENST00000639487 DNPEPQ9ULA0 475 aa6.94□□□□□ -1.3
RTTN-215ENST00000639487 CCDC66A2RUB6 948 aa6.93□□□□□ -1.3
RTTN-215ENST00000639487 SHISA7A6NL88 538 aa6.93□□□□□ -1.3
RTTN-215ENST00000639487 SPDYE4A6NLX3 237 aa6.93□□□□□ -1.3
RTTN-215ENST00000639487 KCNU1A8MYU2 1149 aa6.93□□□□□ -1.3
RTTN-215ENST00000639487 K7ERI5 159 aa6.93□□□□□ -1.3
RTTN-215ENST00000639487 TRDMT1O14717 391 aaKnown RBP6.93□□□□□ -1.3
RTTN-215ENST00000639487 SH3BP5O60239 455 aa6.93□□□□□ -1.3
RTTN-215ENST00000639487 RPL10AP62906 217 aaKnown RBP6.93□□□□□ -1.3
RTTN-215ENST00000639487 TMEM132DQ14C87 1099 aa6.93□□□□□ -1.3
RTTN-215ENST00000639487 SNRNP35Q16560 246 aaKnown RBP6.93□□□□□ -1.3
RTTN-215ENST00000639487 SLC26A9Q7LBE3 791 aa6.93□□□□□ -1.3
RTTN-215ENST00000639487 JAMLQ86YT9 394 aa6.93□□□□□ -1.3
RTTN-215ENST00000639487 GPR161Q8N6U8 529 aaKnown RBP6.93□□□□□ -1.3
RTTN-215ENST00000639487 C1orf127Q8N9H9 656 aa6.93□□□□□ -1.3
RTTN-215ENST00000639487 ZNF461Q8TAF7 563 aa6.93□□□□□ -1.3
RTTN-215ENST00000639487 TBCBQ99426 244 aa6.93□□□□□ -1.3
RTTN-215ENST00000639487 DCLK3Q9C098 648 aa6.93□□□□□ -1.3
RTTN-215ENST00000639487 ZNF408Q9H9D4 720 aa6.93□□□□□ -1.3
RTTN-215ENST00000639487 EXOC1Q9NV70 894 aa6.93□□□□□ -1.3
RTTN-215ENST00000639487 PALM2-AKAP2B1ALY0 433 aaPredicted RBP6.93□□□□□ -1.3
RTTN-215ENST00000639487 CBFA2T2O43439 604 aa6.93□□□□□ -1.3
RTTN-215ENST00000639487 MED7O43513 233 aa6.93□□□□□ -1.3
RTTN-215ENST00000639487 TIMM44O43615 452 aa6.93□□□□□ -1.3
RTTN-215ENST00000639487 MCM7P33993 719 aa6.93□□□□□ -1.3
RTTN-215ENST00000639487 FMO5P49326 533 aa6.93□□□□□ -1.3
RTTN-215ENST00000639487 CLCNKBP51801 687 aa6.93□□□□□ -1.3
RTTN-215ENST00000639487 RFTN1Q14699 578 aaPredicted RBP6.93□□□□□ -1.3
RTTN-215ENST00000639487 RTP2Q5QGT7 225 aa6.93□□□□□ -1.3
RTTN-215ENST00000639487 KCNT2Q6UVM3 1135 aa6.93□□□□□ -1.3
RTTN-215ENST00000639487 WDR5BQ86VZ2 330 aa6.93□□□□□ -1.3
RTTN-215ENST00000639487 CBARPQ8N350 705 aaPredicted RBP6.93□□□□□ -1.3
RTTN-215ENST00000639487 DNAJB3Q8WWF6 145 aa6.93□□□□□ -1.3
RTTN-215ENST00000639487 ANKRD36BP1Q96IX9 119 aa6.93□□□□□ -1.3
RTTN-215ENST00000639487 TSGA13Q96PP4 275 aa6.93□□□□□ -1.3
RTTN-215ENST00000639487 FBXO44Q9H4M3 255 aa6.93□□□□□ -1.3
RTTN-215ENST00000639487 WDR3Q9UNX4 943 aaKnown RBP eCLIP6.93□□□□□ -1.3
RTTN-215ENST00000639487 A0A087WZ62 844 aa6.92□□□□□ -1.3
RTTN-215ENST00000639487 RGSL1A5PLK6 1076 aa6.92□□□□□ -1.3
RTTN-215ENST00000639487 NR1I2O75469 434 aa6.92□□□□□ -1.3
RTTN-215ENST00000639487 FAM13AO94988 1023 aa6.92□□□□□ -1.3
RTTN-215ENST00000639487 GLP2RO95838 553 aa6.92□□□□□ -1.3
RTTN-215ENST00000639487 ITGB1P05556 798 aa6.92□□□□□ -1.3
RTTN-215ENST00000639487 LTBRP36941 435 aa6.92□□□□□ -1.3
RTTN-215ENST00000639487 CLCN5P51795 746 aa6.92□□□□□ -1.3
RTTN-215ENST00000639487 VAMP7P51809 220 aa6.92□□□□□ -1.3
RTTN-215ENST00000639487 DNM1Q05193 864 aaKnown RBP6.92□□□□□ -1.3
RTTN-215ENST00000639487 HYAL1Q12794 435 aa6.92□□□□□ -1.3
RTTN-215ENST00000639487 ZNF174Q15697 407 aa6.92□□□□□ -1.3
RTTN-215ENST00000639487 GAB4Q2WGN9 574 aa6.92□□□□□ -1.3
RTTN-215ENST00000639487 PABPC1LQ4VXU2 614 aaKnown RBP6.92□□□□□ -1.3
RTTN-215ENST00000639487 TMEM63BQ5T3F8 832 aa6.92□□□□□ -1.3
RTTN-215ENST00000639487 PLEKHA7Q6IQ23 1121 aa6.92□□□□□ -1.3
RTTN-215ENST00000639487 RALGPS2Q86X27 583 aaPredicted RBP6.92□□□□□ -1.3
RTTN-215ENST00000639487 CPXCR1Q8N123 301 aa6.92□□□□□ -1.3
RTTN-215ENST00000639487 ANKRD52Q8NB46 1076 aa6.92□□□□□ -1.3
RTTN-215ENST00000639487 RIPOR3Q96MK2 946 aa6.92□□□□□ -1.3
RTTN-215ENST00000639487 GABRG3Q99928 467 aa6.92□□□□□ -1.3
RTTN-215ENST00000639487 FDXACB1Q9BRP7 624 aaPredicted RBP6.92□□□□□ -1.3
RTTN-215ENST00000639487 USP29Q9HBJ7 922 aa6.92□□□□□ -1.3
RTTN-215ENST00000639487 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP6.92□□□□□ -1.3
RTTN-215ENST00000639487 MYBPHLA2RUH7 354 aa6.92□□□□□ -1.3
RTTN-215ENST00000639487 DENND3A2RUS2 1198 aa6.92□□□□□ -1.3
RTTN-215ENST00000639487 PRR19A6NJB7 356 aa6.92□□□□□ -1.3
RTTN-215ENST00000639487 CHADO15335 359 aa6.92□□□□□ -1.3
RTTN-215ENST00000639487 MBTPS2O43462 519 aa6.92□□□□□ -1.3
RTTN-215ENST00000639487 AFPP02771 609 aaKnown RBP6.92□□□□□ -1.3
RTTN-215ENST00000639487 SRPRAP08240 638 aaKnown RBP6.92□□□□□ -1.3
RTTN-215ENST00000639487 SKILP12757 684 aa6.92□□□□□ -1.3
RTTN-215ENST00000639487 DNAJB1P25685 340 aa6.92□□□□□ -1.3
RTTN-215ENST00000639487 MSNP26038 577 aaKnown RBP6.92□□□□□ -1.3
RTTN-215ENST00000639487 SLC11A1P49279 550 aa6.92□□□□□ -1.3
RTTN-215ENST00000639487 YARSP54577 528 aaKnown RBP6.92□□□□□ -1.3
RTTN-215ENST00000639487 LILRA4P59901 499 aa6.92□□□□□ -1.3
RTTN-215ENST00000639487 TUBB4BP68371 445 aa6.92□□□□□ -1.3
RTTN-215ENST00000639487 MYL5Q02045 173 aa6.92□□□□□ -1.3
RTTN-215ENST00000639487 GRIN1Q05586 938 aa6.92□□□□□ -1.3
RTTN-215ENST00000639487 HTR4Q13639 388 aa6.92□□□□□ -1.3
RTTN-215ENST00000639487 MCM6Q14566 821 aa6.92□□□□□ -1.3
RTTN-215ENST00000639487 WDR78Q5VTH9 848 aa6.92□□□□□ -1.3
RTTN-215ENST00000639487 DBX2Q6ZNG2 339 aa6.92□□□□□ -1.3
RTTN-215ENST00000639487 RASSF3Q86WH2 238 aa6.92□□□□□ -1.3
RTTN-215ENST00000639487 C12orf50Q8NA57 414 aaPredicted RBP6.92□□□□□ -1.3
RTTN-215ENST00000639487 NELL2Q99435 816 aa6.92□□□□□ -1.3
RTTN-215ENST00000639487 LRRC2Q9BYS8 371 aa6.92□□□□□ -1.3
RTTN-215ENST00000639487 RPF1Q9H9Y2 349 aaKnown RBP6.92□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 61.8 ms